mRNA_M-pyrifera_M_contig762.17972.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig762.17972.1 vs. uniprot
Match: D7FW18_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW18_ECTSI) HSP 1 Score: 123 bits (308), Expect = 8.380e-32 Identity = 55/68 (80.88%), Postives = 64/68 (94.12%), Query Frame = 1 Query: 1 LRQRLPRVLEGMTISNIWAYKFDSDTSLNGITVHADVASVNLNFWVTPDDANLDPSSGGLVVYPKEPP 204 L++RLP+VLEGMT+SN+WAYKFDSDTS++GI H+D A+VNLNFWVTPDDANLDPSSGGLVVYPK PP Sbjct: 273 LQERLPQVLEGMTLSNLWAYKFDSDTSMDGIATHSDHATVNLNFWVTPDDANLDPSSGGLVVYPKVPP 340
BLAST of mRNA_M-pyrifera_M_contig762.17972.1 vs. uniprot
Match: A0A7S1YH78_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YH78_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 9.540e-21 Identity = 39/68 (57.35%), Postives = 53/68 (77.94%), Query Frame = 1 Query: 1 LRQRLPRVLEGMTISNIWAYKFDSDTSLNGITVHADVASVNLNFWVTPDDANLDPSSGGLVVYPKEPP 204 L Q+LPR+++G + +WAYK+DSD S GI +HAD A+VN+N W+TPD ANLDP SGGLV++ +PP Sbjct: 69 LHQKLPRIMKGHPLKYLWAYKYDSDYS--GINIHADQAAVNVNLWLTPDSANLDPDSGGLVIFTAKPP 134
BLAST of mRNA_M-pyrifera_M_contig762.17972.1 vs. uniprot
Match: A0A7S1VKH0_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VKH0_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 6.820e-20 Identity = 39/68 (57.35%), Postives = 53/68 (77.94%), Query Frame = 1 Query: 1 LRQRLPRVLEGMTISNIWAYKFDSDTSLNGITVHADVASVNLNFWVTPDDANLDPSSGGLVVYPKEPP 204 L Q+LPR+++G + +WAYK+DSD S GI +HAD A+VN+N W+TPD ANLDP SGGLV++ +PP Sbjct: 198 LHQKLPRIMKGHPLKYLWAYKYDSDYS--GINIHADQAAVNVNLWLTPDSANLDPDSGGLVIFTAKPP 263
BLAST of mRNA_M-pyrifera_M_contig762.17972.1 vs. uniprot
Match: A0A7S2A6T5_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A6T5_TRICV) HSP 1 Score: 87.4 bits (215), Expect = 8.600e-20 Identity = 39/68 (57.35%), Postives = 50/68 (73.53%), Query Frame = 1 Query: 1 LRQRLPRVLEGMTISNIWAYKFDSDTSLNGITVHADVASVNLNFWVTPDDANLDPSSGGLVVYPKEPP 204 L LPR++EG + +WAYK+DS + GI HAD A+VN+N W+TPDDANLDP SGGLVV+ +PP Sbjct: 68 LNDALPRIMEGHPLKYLWAYKYDSQYT--GINTHADQAAVNVNLWITPDDANLDPDSGGLVVFTAKPP 133
BLAST of mRNA_M-pyrifera_M_contig762.17972.1 vs. uniprot
Match: A0A1E7EWK8_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EWK8_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 1.450e-19 Identity = 36/68 (52.94%), Postives = 54/68 (79.41%), Query Frame = 1 Query: 1 LRQRLPRVLEGMTISNIWAYKFDSDTSLNGITVHADVASVNLNFWVTPDDANLDPSSGGLVVYPKEPP 204 LR+ LP + +G + +WAYK+DSD++ GI +HAD A++N+N W+TP++ANLDP+SGGLV+Y +PP Sbjct: 206 LRKLLPDIFDGHPLKYMWAYKYDSDSNYGGINLHADEAAINVNLWLTPNEANLDPNSGGLVIYTVKPP 273
BLAST of mRNA_M-pyrifera_M_contig762.17972.1 vs. uniprot
Match: A0A2E9DX06_9FLAO (Uncharacterized protein n=1 Tax=Crocinitomicaceae bacterium TaxID=2026728 RepID=A0A2E9DX06_9FLAO) HSP 1 Score: 89.7 bits (221), Expect = 2.330e-19 Identity = 40/73 (54.79%), Postives = 55/73 (75.34%), Query Frame = 1 Query: 1 LRQRLPRVLEGMTISNIWAYKFDS-----DTSLNGITVHADVASVNLNFWVTPDDANLDPSSGGLVVYPKEPP 204 LR++ P++ + +I+ IWAYK+DS D+SL GI VHAD A+VN+NFW+TP +ANL+P SGGL+VY E P Sbjct: 427 LRKKFPKIFKSYSINQIWAYKYDSRAKNKDSSLKGINVHADYAAVNVNFWITPKEANLNPKSGGLIVYDVEAP 499
BLAST of mRNA_M-pyrifera_M_contig762.17972.1 vs. uniprot
Match: A0A2E6VZU3_9PROT (Uncharacterized protein n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2E6VZU3_9PROT) HSP 1 Score: 82.8 bits (203), Expect = 3.010e-19 Identity = 37/68 (54.41%), Postives = 48/68 (70.59%), Query Frame = 1 Query: 1 LRQRLPRVLEGMTISNIWAYKFDSDTSLNGITVHADVASVNLNFWVTPDDANLDPSSGGLVVYPKEPP 204 +R P + + ++ +WAYK+DS LNGI HAD A+VN+NFW+TPD ANL+P SGGLVVY E P Sbjct: 1 MRHTFPEIFKNHQLTQLWAYKYDSQ--LNGIGAHADFAAVNVNFWITPDAANLNPKSGGLVVYDAEAP 66
BLAST of mRNA_M-pyrifera_M_contig762.17972.1 vs. uniprot
Match: A0A2E4NFC3_9PROT (Uncharacterized protein n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E4NFC3_9PROT) HSP 1 Score: 88.2 bits (217), Expect = 7.880e-19 Identity = 40/73 (54.79%), Postives = 52/73 (71.23%), Query Frame = 1 Query: 1 LRQRLPRVLEGMTISNIWAYKFDS-----DTSLNGITVHADVASVNLNFWVTPDDANLDPSSGGLVVYPKEPP 204 LR +LPR+ + ++ +WAYK+DS + S GI VHAD A+VN+NFW+TP ANLDPSSGGL+VY E P Sbjct: 387 LRNKLPRIFKNHQLTQLWAYKYDSRACGINNSFKGINVHADFAAVNVNFWITPKTANLDPSSGGLIVYSAEAP 459
BLAST of mRNA_M-pyrifera_M_contig762.17972.1 vs. uniprot
Match: A0A5J4E8R0_9BACT (Beta-barrel assembly-enhancing protease n=2 Tax=Bacteria TaxID=2 RepID=A0A5J4E8R0_9BACT) HSP 1 Score: 87.4 bits (215), Expect = 1.500e-18 Identity = 39/68 (57.35%), Postives = 53/68 (77.94%), Query Frame = 1 Query: 1 LRQRLPRVLEGMTISNIWAYKFDSDTSLNGITVHADVASVNLNFWVTPDDANLDPSSGGLVVYPKEPP 204 LR++LP++L ++ +W Y +DS+ S GIT HAD A+VNLNFW+TPD+AN DP+SGGL+VY KE P Sbjct: 415 LREKLPQILGRHPLNQMWGYIYDSEMS--GITAHADAAAVNLNFWITPDEANEDPNSGGLIVYTKEAP 480
BLAST of mRNA_M-pyrifera_M_contig762.17972.1 vs. uniprot
Match: A0A7W8FZW5_9GAMM (Tetratricopeptide (TPR) repeat protein n=1 Tax=Chiayiivirga flava TaxID=659595 RepID=A0A7W8FZW5_9GAMM) HSP 1 Score: 87.0 bits (214), Expect = 2.080e-18 Identity = 37/63 (58.73%), Postives = 53/63 (84.13%), Query Frame = 1 Query: 1 LRQRLPRVLEGMTISNIWAYKFDSDTSLNGITVHADVASVNLNFWVTPDDANLDPSSGGLVVY 189 LR+ LP + + ++ +WA+K+DS +L+GI +HAD+A+VNLNFW+TPDDANLDP+SGGLVV+ Sbjct: 450 LRRALPNIFKDYPLTQLWAFKYDS--TLDGIELHADIAAVNLNFWLTPDDANLDPASGGLVVW 510 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig762.17972.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig762.17972.1 >prot_M-pyrifera_M_contig762.17972.1 ID=prot_M-pyrifera_M_contig762.17972.1|Name=mRNA_M-pyrifera_M_contig762.17972.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=68bp LRQRLPRVLEGMTISNIWAYKFDSDTSLNGITVHADVASVNLNFWVTPDDback to top mRNA from alignment at M-pyrifera_M_contig762:19636..20413+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig762.17972.1 ID=mRNA_M-pyrifera_M_contig762.17972.1|Name=mRNA_M-pyrifera_M_contig762.17972.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=778bp|location=Sequence derived from alignment at M-pyrifera_M_contig762:19636..20413+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig762:19636..20413+ >mRNA_M-pyrifera_M_contig762.17972.1 ID=mRNA_M-pyrifera_M_contig762.17972.1|Name=mRNA_M-pyrifera_M_contig762.17972.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=408bp|location=Sequence derived from alignment at M-pyrifera_M_contig762:19636..20413+ (Macrocystis pyrifera P11B4 male)back to top |