prot_M-pyrifera_M_contig7613.17957.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig7613.17957.1
Unique Nameprot_M-pyrifera_M_contig7613.17957.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length120
Homology
BLAST of mRNA_M-pyrifera_M_contig7613.17957.1 vs. uniprot
Match: D8LDJ3_ECTSI (DNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDJ3_ECTSI)

HSP 1 Score: 208 bits (529), Expect = 1.820e-60
Identity = 109/119 (91.60%), Postives = 115/119 (96.64%), Query Frame = 0
Query:    1 MYYSSKRQQYLVDQGYTFKVVTDLANASDRSQSNLPDRQSEIRVLRDTLTAKTDLEEKEEKKMLDRDMDDIGEGSARGTVMRRKGNLGALSGADGSRYMEYDSRPP-KKHPLFKSRYMK 118
            MYYSSKRQQYLVDQGYTFKVVTDLANASDRSQS LPDR+SE+RVL++TL AKTD EEK+EKKMLDRDMDDIGEGSARGTVMRRKGNLGALSGADGSRYMEYDSRPP KKHPLFKSRY+K
Sbjct:  765 MYYSSKRQQYLVDQGYTFKVVTDLANASDRSQSKLPDRKSELRVLQETLMAKTDQEEKDEKKMLDRDMDDIGEGSARGTVMRRKGNLGALSGADGSRYMEYDSRPPPKKHPLFKSRYVK 883          
BLAST of mRNA_M-pyrifera_M_contig7613.17957.1 vs. uniprot
Match: A0A7S2V0P5_9STRA (DNA helicase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0P5_9STRA)

HSP 1 Score: 103 bits (256), Expect = 4.140e-24
Identity = 62/122 (50.82%), Postives = 78/122 (63.93%), Query Frame = 0
Query:    1 MYYSSKRQQYLVDQGYTFKVVTDLANASD--RSQSNLPDRQSEIRVLRDTLTAKTDLEEKEEKKMLDRDMDDIGEGSARGTVMRRKGNLGALSGADGSRYMEYDSRPPK----KHPLFKSRY 116
            M+YS+KRQQYLVDQGYTFKVV DL   ++  R+QS LP  Q E+ VLR+ L A  + EE  E   L +D D IGE +    V R  G+L + SGADG+RYMEY +   +    +H LFK RY
Sbjct:  193 MFYSTKRQQYLVDQGYTFKVVNDLVEQAEEARAQSCLPTLQKELEVLREVLCADYEKEEAAESAALQKDQDYIGEENRTARVRRSAGSLASRSGADGTRYMEYSTGKKQDQSSRHTLFKKRY 314          
BLAST of mRNA_M-pyrifera_M_contig7613.17957.1 vs. uniprot
Match: A0A2P4XQZ3_9STRA (DNA helicase (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XQZ3_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 1.220e-15
Identity = 53/120 (44.17%), Postives = 75/120 (62.50%), Query Frame = 0
Query:    1 MYYSSKRQQYLVDQGYTFKVVTDLANASDRSQSNLPDRQSEIRVLRDTLTAKTDLEEKEEKKMLDRDMDDIG--EGSARGTVMRRKGNLGALSGADGSRYMEYDSR--PPKKHPLFKSRY 116
            M+YS+KRQQYLVDQGYTFKVVTDL       Q     ++ +  +L + L+A  +   K+E   + RD +D+   E S  G   ++ G+LGALSGADG++YMEY +     ++H LF+ RY
Sbjct:  484 MFYSNKRQQYLVDQGYTFKVVTDLFEPGS-FQGVFTRKEDQRALLNEVLSADVESAAKDENAAI-RDDEDLSRLELSGHGRKKKKVGSLGALSGADGTKYMEYSAGHGAKQRHNLFRDRY 601          
BLAST of mRNA_M-pyrifera_M_contig7613.17957.1 vs. uniprot
Match: K3WMY8_GLOUD (DNA helicase n=3 Tax=Pythiaceae TaxID=4782 RepID=K3WMY8_GLOUD)

HSP 1 Score: 81.6 bits (200), Expect = 1.260e-15
Identity = 52/119 (43.70%), Postives = 77/119 (64.71%), Query Frame = 0
Query:    1 MYYSSKRQQYLVDQGYTFKVVTDLANASDRSQSNLPDRQSEIRVLRDTLTAKTDLEEKEEKKMLDRDMDDIGEGSARGTVMRRK-GNLGALSGADGSRYMEYDSR--PPKKHPLFKSRY 116
            M+YS+KRQQYLVDQGYTFKVVTDL +  +  Q     + ++ ++L + L+A  +   K+E   + RD +D+      G   ++K  +LGALSGADG++YMEY +   P ++H LF+ RY
Sbjct:  702 MFYSNKRQQYLVDQGYTFKVVTDLYD-KETFQGVFTKKDAQRQLLNEVLSADVESAAKDENAAI-RDDEDLSRLELGGGRKKKKMSSLGALSGADGTQYMEYSAGHGPKQRHNLFRDRY 818          
BLAST of mRNA_M-pyrifera_M_contig7613.17957.1 vs. uniprot
Match: A0A662YBE6_9STRA (DNA helicase (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YBE6_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 2.050e-15
Identity = 52/120 (43.33%), Postives = 74/120 (61.67%), Query Frame = 0
Query:    1 MYYSSKRQQYLVDQGYTFKVVTDLANASDRSQSNLPDRQSEIRVLRDTLTAKTDLEEKEEKKMLDRDMDDIG--EGSARGTVMRRKGNLGALSGADGSRYMEYDSR--PPKKHPLFKSRY 116
            MYYS+KRQQYLVDQGYTFKVVTDL       +     ++ +  +L + L+A  +   K+E   + RD +D+   E S  G   ++  +LGALSGADG++YMEY +     ++H LF+ RY
Sbjct:  126 MYYSNKRQQYLVDQGYTFKVVTDLYEPGS-FEGVFTRKEDQRALLNEVLSADVESAAKDENAAI-RDDEDLSRLELSGHGRKRKKMVSLGALSGADGTKYMEYSAGHGAKQRHNLFRDRY 243          
BLAST of mRNA_M-pyrifera_M_contig7613.17957.1 vs. uniprot
Match: A0A397D4G1_9STRA (DNA helicase (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397D4G1_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 3.950e-15
Identity = 56/123 (45.53%), Postives = 77/123 (62.60%), Query Frame = 0
Query:    1 MYYSSKRQQYLVDQGYTFKVVTDLANASDRSQSNLPDRQSEIRVLRDTLTAKTDLEEKEEKKMLDRDMDDIG-----EGSARGTVMRRKGNLGALSGADGSRYMEYDSR--PPKKHPLFKSRY 116
            MYYS+KRQQYLVDQGYTFKVVT+L +     ++   D QSE+  L + L A+ DLE     K +D +  +I      E  +R +  ++K  +GALSGADGS+YMEY +     ++H LF+ RY
Sbjct:   44 MYYSNKRQQYLVDQGYTFKVVTELYD-----KATFEDSQSEL--LAEVLEAQ-DLE-----KFIDDENAEISKIGGDEDLSRLSGKKKKTTMGALSGADGSKYMEYSTGHGAKQRHNLFRDRY 153          
BLAST of mRNA_M-pyrifera_M_contig7613.17957.1 vs. uniprot
Match: A0A5D6XVJ4_9STRA (DNA helicase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVJ4_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 5.960e-15
Identity = 52/120 (43.33%), Postives = 76/120 (63.33%), Query Frame = 0
Query:    1 MYYSSKRQQYLVDQGYTFKVVTDLANASDRSQSNLPDRQSEIRVLRDTLTAKTDLEEKEEKKMLDRDMDDIG--EGSARGTVMRRKGNLGALSGADGSRYMEYDSR--PPKKHPLFKSRY 116
            M+YS+KRQQYLVDQGYTFKVVT+L    D  Q     + ++ ++L + L+A  +   K+E   + RD +D+   E S  G   ++  +LGALSGADG++YMEY +     ++H LF+ RY
Sbjct:  720 MFYSNKRQQYLVDQGYTFKVVTELFEP-DSFQGVYTKKDAQRQLLNEVLSADVESAAKDENAAI-RDDEDLARLELSGAGRKKKKTSSLGALSGADGAQYMEYSAGHGAKQRHNLFRDRY 837          
BLAST of mRNA_M-pyrifera_M_contig7613.17957.1 vs. uniprot
Match: A0A7S4A639_9STRA (DNA helicase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A639_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 2.790e-14
Identity = 55/121 (45.45%), Postives = 70/121 (57.85%), Query Frame = 0
Query:    1 MYYSSKRQQYLVDQGYTFKVVTDLANASDRSQSNLPDRQSEIRVLRDTLTAKTDLEEKEEKKMLDRDM-DDIGEGSARGTVMRRKGNLGALSGADGSRYMEYDS-----RPPKKHPLFKSR 115
            M+YS+KRQQYLVDQGYTFKVVTDL   +    S L   Q EI +L   L A    EE EE+K L +   DDI          R + +L +++G DG RY+EY S     + PK+H LF+ R
Sbjct:  643 MFYSTKRQQYLVDQGYTFKVVTDLPQPT---LSALASEQDEIDLLNQVLNADALKEEAEEEKALAKAAKDDI-------APRRTQVSLASMAGGDGVRYLEYGSTDAPKQKPKRHKLFRGR 753          
BLAST of mRNA_M-pyrifera_M_contig7613.17957.1 vs. uniprot
Match: A0A024UEB9_9STRA (DNA helicase n=8 Tax=Aphanomyces TaxID=100860 RepID=A0A024UEB9_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 7.120e-14
Identity = 53/123 (43.09%), Postives = 79/123 (64.23%), Query Frame = 0
Query:    1 MYYSSKRQQYLVDQGYTFKVVTDLANASDRSQSNLPDRQSEIRVLRDTLTAKTDLEEKEEKKMLDRDMDDIG-----EGSARGTVMRRKGNLGALSGADGSRYMEYDSR--PPKKHPLFKSRY 116
            MYYS+KRQQYLVDQGYTFKVVT+L + S   +    +++++  +L + L A+ DLE     K +D +  +I      E  +R +  ++K ++GALSGADGS+YMEY +     ++H LF+ RY
Sbjct:  693 MYYSNKRQQYLVDQGYTFKVVTELYDKST-FEGVFTNKEAQSELLAEVLEAQ-DLE-----KFIDDENAEISKIGGDEDLSRLSGKKKKTSMGALSGADGSKYMEYSTGHGAKQRHNLFRDRY 808          
BLAST of mRNA_M-pyrifera_M_contig7613.17957.1 vs. uniprot
Match: A0A397EX62_9STRA (DNA helicase n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397EX62_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 9.720e-14
Identity = 56/123 (45.53%), Postives = 77/123 (62.60%), Query Frame = 0
Query:    1 MYYSSKRQQYLVDQGYTFKVVTDLANASDRSQSNLPDRQSEIRVLRDTLTAKTDLEEKEEKKMLDRDMDDIG-----EGSARGTVMRRKGNLGALSGADGSRYMEYDSR--PPKKHPLFKSRY 116
            MYYS+KRQQYLVDQGYTFKVVT+L +     ++   D QSE+  L + L A+ DLE     K +D +  +I      E  +R +  ++K  +GALSGADGS+YMEY +     ++H LF+ RY
Sbjct:  695 MYYSNKRQQYLVDQGYTFKVVTELYD-----KATFEDSQSEL--LAEVLEAQ-DLE-----KFIDDENAEISKIGGDEDLSRLSGKKKKTTMGALSGADGSKYMEYSTGHGAKQRHNLFRDRY 804          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7613.17957.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDJ3_ECTSI1.820e-6091.60DNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
A0A7S2V0P5_9STRA4.140e-2450.82DNA helicase n=1 Tax=Fibrocapsa japonica TaxID=946... [more]
A0A2P4XQZ3_9STRA1.220e-1544.17DNA helicase (Fragment) n=1 Tax=Phytophthora palmi... [more]
K3WMY8_GLOUD1.260e-1543.70DNA helicase n=3 Tax=Pythiaceae TaxID=4782 RepID=K... [more]
A0A662YBE6_9STRA2.050e-1543.33DNA helicase (Fragment) n=1 Tax=Nothophytophthora ... [more]
A0A397D4G1_9STRA3.950e-1545.53DNA helicase (Fragment) n=1 Tax=Aphanomyces astaci... [more]
A0A5D6XVJ4_9STRA5.960e-1543.33DNA helicase n=1 Tax=Pythium brassicum TaxID=14850... [more]
A0A7S4A639_9STRA2.790e-1445.45DNA helicase n=1 Tax=Pelagomonas calceolata TaxID=... [more]
A0A024UEB9_9STRA7.120e-1443.09DNA helicase n=8 Tax=Aphanomyces TaxID=100860 RepI... [more]
A0A397EX62_9STRA9.720e-1445.53DNA helicase n=4 Tax=Aphanomyces astaci TaxID=1120... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032438ERCC3/RAD25/XPB helicase, C-terminal domainPFAMPF16203ERCC3_RAD25_Ccoord: 1..62
e-value: 4.4E-14
score: 52.3
NoneNo IPR availablePANTHERPTHR11274RAD25/XP-B DNA REPAIR HELICASEcoord: 1..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7613contigM-pyrifera_M_contig7613:6552..11565 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7613.17957.1mRNA_M-pyrifera_M_contig7613.17957.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig7613 4949..11857 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig7613.17957.1 ID=prot_M-pyrifera_M_contig7613.17957.1|Name=mRNA_M-pyrifera_M_contig7613.17957.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=120bp
MYYSSKRQQYLVDQGYTFKVVTDLANASDRSQSNLPDRQSEIRVLRDTLT
AKTDLEEKEEKKMLDRDMDDIGEGSARGTVMRRKGNLGALSGADGSRYME
YDSRPPKKHPLFKSRYMKF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032438ERCC3_RAD25_C