mRNA_M-pyrifera_M_contig76103.17951.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig76103.17951.1
Unique NamemRNA_M-pyrifera_M_contig76103.17951.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig76103.17951.1 vs. uniprot
Match: A0A7M5WZA3_9CNID (DNA polymerase epsilon catalytic subunit n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5WZA3_9CNID)

HSP 1 Score: 199 bits (505), Expect = 1.190e-54
Identity = 107/249 (42.97%), Postives = 156/249 (62.65%), Query Frame = 1
Query:    1 ARLLQRNNHVLWVSDTNNPDVGMREEDNCKFVEELRH---PERAVPGCYTTVCIQLQLRNLAINTILESHHVHDIEGIAKLSQ--HKAAFQQQSDVTSGRQQKGKEEETAAMADSLDDTDACLPAFRVLKNLITQWHLEVGSSPEVRNEHAEMLLDHFFRWASSSRAYLFDTALQQLIHTLMRKVFFQLLAEFKKLGSKVVHANFHQITICTTKRSREDAVNYCNFICKTIGMRPLFSHIGLQPVRFWD 732
            AR L R+NHVLW+S T+ PD+G +EEDN + V E      PE   PGCY+TVC+++ + +LA+NT+L+SHHVHD EG+A       +A+ ++  +  SG          AA   S D+  +C  +F+VLK LI  W  EV ++   RN+ A+  L HF+R+  S  A L+D AL + IH LM+K F QL+AEFK LGS +V+ANF++I + + KR  +DA+ Y  +I  +I  +PLF +I L+P   W+
Sbjct: 1674 ARHLSRSNHVLWISPTDRPDLGGKEEDNFRLVTEFDEGGSPEINQPGCYSTVCVEISIDSLAVNTVLQSHHVHDAEGVASSLDTIQQASLEEMLNSRSG---------AAATLTSYDEAASCAQSFKVLKGLIISWIQEVFAN---RNDFADTQLIHFYRYLRSPEAMLYDPALCKYIHGLMKKFFMQLIAEFKTLGSTIVYANFNKIILNSKKRRVKDALAYVQYILTSIRSKPLFKNIALEPRSCWE 1910          
BLAST of mRNA_M-pyrifera_M_contig76103.17951.1 vs. uniprot
Match: A0A6J0U8Y0_9SAUR (DNA polymerase epsilon catalytic subunit n=11 Tax=Episquamata TaxID=1329912 RepID=A0A6J0U8Y0_9SAUR)

HSP 1 Score: 195 bits (495), Expect = 2.590e-53
Identity = 102/249 (40.96%), Postives = 158/249 (63.45%), Query Frame = 1
Query:    1 ARLLQRNNHVLWVSDTNNPDVGMREEDNCKFVEELRHP---ERAVPGCYTTVCIQLQLRNLAINTILESHHVHDIEGIAKLSQHKAAFQQQS--DVTSGRQQKGKEEETAAMADSLDDTDACLPAFRVLKNLITQWHLEVGSSPEVRNEHAEMLLDHFFRWASSSRAYLFDTALQQLIHTLMRKVFFQLLAEFKKLGSKVVHANFHQITICTTKRSREDAVNYCNFICKTIGMRPLFSHIGLQPVRFWD 732
            +R L R+NH+LW+S T+ PD+G RE D+ + V E       E   PGCY+TVC++L L++LA+NTIL+SHHV+D+EG + +     A QQ S  D+ +G Q        A++  S D+T  C   FR+LK+++  W  E+    + RN +A+  + HF+RW  S  + L+D AL +++H +M+K+F QL+AEFK+LGS VV+ANF++I +CT KR  EDA+ Y  +I  +I  + +F  + +   R W+
Sbjct: 1412 SRHLHRHNHLLWLSPTSRPDLGGREADDSRLVMEFDERVSVEINHPGCYSTVCVELDLQSLAVNTILQSHHVNDMEGASSVCVSFDAIQQASLEDMVTGNQ-------AASLPASYDETALCSNTFRILKSMVVGWVKEIT---QYRNVYADNQVIHFYRWLRSPTSLLYDPALHRMLHNMMKKLFLQLVAEFKRLGSSVVYANFNRIILCTKKRRIEDALAYVEYITNSIHSKEIFHSLTISFSRCWE 1650          
BLAST of mRNA_M-pyrifera_M_contig76103.17951.1 vs. uniprot
Match: A0A0B7AER0_9EUPU (DNA polymerase epsilon catalytic subunit (Fragment) n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B7AER0_9EUPU)

HSP 1 Score: 187 bits (474), Expect = 5.870e-53
Identity = 99/247 (40.08%), Postives = 149/247 (60.32%), Query Frame = 1
Query:    1 ARLLQRNNHVLWVSDTNNPDVGMREEDNCKFVEELRHP---ERAVPGCYTTVCIQLQLRNLAINTILESHHVHDIEGIAKLSQHKAAFQQQSDVTSGRQQKGKEEETAAMADSLDDTDACLPAFRVLKNLITQWHLEVGSSPEVRNEHAEMLLDHFFRWASSSRAYLFDTALQQLIHTLMRKVFFQLLAEFKKLGSKVVHANFHQITICTTKRSREDAVNYCNFICKTIGMRPLFSHIGLQPVRFWD 732
            ARL  ++NH+LW S T  PD+G +E D+ +   EL      E   PG Y+TVC+ ++L +LA+NTI+ES H++D+EG + +S   A      ++  G+         A M  S D+T  C   FR+LK ++  W  +V S    RN HA+  L HF+RW  S  A L+D AL++ +H +M+KVF QL++EFK+LGS +VHANF+++ +CT KR  EDA+ Y  +I  +I  R +F  IG+   + W+
Sbjct:   79 ARLATKHNHILWASATYRPDLGGKEADDNRLCMELEDNILVEMNNPGAYSTVCVDVELTSLAVNTIVESGHINDLEGASAVSFDSAPQTSLEEMVKGQG-------AAMMLASYDETALCATTFRILKFMVQGWLKDVTSH---RNCHADNQLMHFYRWIRSPNALLYDPALRRTLHNMMKKVFMQLISEFKRLGSVIVHANFNRLIVCTKKRHIEDAMAYMEYITSSIRSRDIFHMIGIDFDKCWE 315          
BLAST of mRNA_M-pyrifera_M_contig76103.17951.1 vs. uniprot
Match: UPI0005217A10 (DNA polymerase epsilon catalytic subunit A-like n=1 Tax=Apaloderma vittatum TaxID=57397 RepID=UPI0005217A10)

HSP 1 Score: 189 bits (480), Expect = 1.670e-52
Identity = 100/251 (39.84%), Postives = 159/251 (63.35%), Query Frame = 1
Query:    1 ARLLQRNNHVLWVSDTNNPDVGMREEDNCKFVEELRHPERAV-----PGCYTTVCIQLQLRNLAINTILESHHVHDIEGIAKLSQHKAAFQQQS--DVTSGRQQKGKEEETAAMADSLDDTDACLPAFRVLKNLITQWHLEVGSSPEVRNEHAEMLLDHFFRWASSSRAYLFDTALQQLIHTLMRKVFFQLLAEFKKLGSKVVHANFHQITICTTKRSREDAVNYCNFICKTIGMRPLFSHIGLQPVRFWD 732
            +R L+R+NH+LW+S T  PD+G +E D+ + V E    ERA      PGCY+TVC++L +++LA+NT+L+SHHV+D+EG + +S      QQ S  D+ +G Q        A++  S D+T  C   FR+LK+++  W  E+    +  N +A+  + HF+RW  S  + L+D AL + +H +M+K+F QL+AEFK+LGS VV+ANF++I +CT KR  EDA++Y  +I  +I  + +F  + +   R W+
Sbjct:   41 SRHLRRHNHLLWLSPTARPDLGGKEADDNRLVMEF--DERASVEINNPGCYSTVCLELDIQSLAVNTVLQSHHVNDMEGGSSMSISFDVIQQASLEDMVTGNQ-------AASIPASYDETALCSNTFRILKSMVVSWVKEIT---QYHNIYADNQVIHFYRWLRSPSSLLYDPALHRTLHNMMKKLFLQLVAEFKRLGSSVVYANFNRIILCTKKRRIEDALSYMEYIISSIHSKEIFHSLTISFSRCWE 279          
BLAST of mRNA_M-pyrifera_M_contig76103.17951.1 vs. uniprot
Match: A0A2I0LKE3_COLLI (DNA polymerase epsilon catalytic subunit n=1 Tax=Columba livia TaxID=8932 RepID=A0A2I0LKE3_COLLI)

HSP 1 Score: 192 bits (487), Expect = 2.980e-52
Identity = 100/251 (39.84%), Postives = 159/251 (63.35%), Query Frame = 1
Query:    1 ARLLQRNNHVLWVSDTNNPDVGMREEDNCKFVEELRHPERAV-----PGCYTTVCIQLQLRNLAINTILESHHVHDIEGIAKLSQHKAAFQQQS--DVTSGRQQKGKEEETAAMADSLDDTDACLPAFRVLKNLITQWHLEVGSSPEVRNEHAEMLLDHFFRWASSSRAYLFDTALQQLIHTLMRKVFFQLLAEFKKLGSKVVHANFHQITICTTKRSREDAVNYCNFICKTIGMRPLFSHIGLQPVRFWD 732
            +R L+R+NH+LW+S T  PD+G +E D+ + V E    ERA      PGCY+TVC++L +++LA+NT+L+SHH++D+EG + +S      QQ S  D+ +G Q        A +  S D+T  C   FR+LK+++  W  E+    + RN +A+  + HF+RW  S  + L+D AL + +H +M+K+F QL+AEFK+LGS VV+ANF++I +CT KR  EDA++Y  +I  +I  + +F  + +   R W+
Sbjct: 1300 SRHLRRHNHLLWLSPTARPDLGGKEADDNRLVMEF--DERASVEINNPGCYSTVCLELDIQSLAVNTVLQSHHINDMEGCSSMSISFDVIQQASLEDMVTGNQ-------AANIPASYDETALCSNTFRILKSMVVSWVKEIT---QYRNVYADNQVIHFYRWLRSPSSLLYDPALHRTLHNMMKKLFLQLVAEFKRLGSSVVYANFNRIILCTKKRRIEDAISYMEYIINSIHSKEIFHSLTISFSRCWE 1538          
BLAST of mRNA_M-pyrifera_M_contig76103.17951.1 vs. uniprot
Match: A0A7L4G424_9COLU (DNA polymerase epsilon catalytic subunit (Fragment) n=15 Tax=Neognathae TaxID=8825 RepID=A0A7L4G424_9COLU)

HSP 1 Score: 192 bits (487), Expect = 3.090e-52
Identity = 100/251 (39.84%), Postives = 159/251 (63.35%), Query Frame = 1
Query:    1 ARLLQRNNHVLWVSDTNNPDVGMREEDNCKFVEELRHPERAV-----PGCYTTVCIQLQLRNLAINTILESHHVHDIEGIAKLSQHKAAFQQQS--DVTSGRQQKGKEEETAAMADSLDDTDACLPAFRVLKNLITQWHLEVGSSPEVRNEHAEMLLDHFFRWASSSRAYLFDTALQQLIHTLMRKVFFQLLAEFKKLGSKVVHANFHQITICTTKRSREDAVNYCNFICKTIGMRPLFSHIGLQPVRFWD 732
            +R L+R+NH+LW+S T  PD+G +E D+ + V E    ERA      PGCY+TVC++L +++LA+NT+L+SHH++D+EG + +S      QQ S  D+ +G Q        A +  S D+T  C   FR+LK+++  W  E+    + RN +A+  + HF+RW  S  + L+D AL + +H +M+K+F QL+AEFK+LGS VV+ANF++I +CT KR  EDA++Y  +I  +I  + +F  + +   R W+
Sbjct: 1690 SRHLRRHNHLLWLSPTARPDLGGKEADDNRLVMEF--DERASVEINNPGCYSTVCLELDIQSLAVNTVLQSHHINDMEGCSSMSISFDVIQQASLEDMVTGNQ-------AANIPASYDETALCSNTFRILKSMVVSWVKEIT---QYRNVYADNQVIHFYRWLRSPSSLLYDPALHRTLHNMMKKLFLQLVAEFKRLGSSVVYANFNRIILCTKKRRIEDAISYMEYIINSIHSKEIFHSLTISFSRCWE 1928          
BLAST of mRNA_M-pyrifera_M_contig76103.17951.1 vs. uniprot
Match: A0A8J6DPB7_GALPY (DNA polymerase epsilon catalytic subunit n=3 Tax=Talpidae TaxID=9373 RepID=A0A8J6DPB7_GALPY)

HSP 1 Score: 191 bits (486), Expect = 4.230e-52
Identity = 103/249 (41.37%), Postives = 153/249 (61.45%), Query Frame = 1
Query:    1 ARLLQRNNHVLWVSDTNNPDVGMREEDNCKFVEELRHP---ERAVPGCYTTVCIQLQLRNLAINTILESHHVHDIEGIAKLSQHKAAFQQQS--DVTSGRQQKGKEEETAAMADSLDDTDACLPAFRVLKNLITQWHLEVGSSPEVRNEHAEMLLDHFFRWASSSRAYLFDTALQQLIHTLMRKVFFQLLAEFKKLGSKVVHANFHQITICTTKRSREDAVNYCNFICKTIGMRPLFSHIGLQPVRFWD 732
            AR LQR+NH+LW+S T+ PD+G +E D+ + + EL      E   PGCY+TVC++L ++NLA+NTIL+SHHVHD+EG   +    +   Q S  D+ +G Q        A+   S D+T  C   FRVLK+++  W  E+       N +A+  + HF+RW  S  + L D AL + +H LM+K+F QL+AEFK+LGS VV+ANFH+I +CT KR  +DA+ Y  +I  +I  + +F  + +   R W+
Sbjct: 1787 ARHLQRHNHLLWLSPTSRPDLGGKEADDNRLLMELEDQAPVEINSPGCYSTVCVELDVQNLAVNTILQSHHVHDMEGAGSVGVSFSVVPQASLEDMITGVQ-------AASALASYDETALCSGTFRVLKSMVVGWVREITQH---HNVYADNQVMHFYRWLRSPSSLLHDPALHRTLHGLMKKLFLQLIAEFKRLGSLVVYANFHRIILCTKKRRIDDALAYVEYITSSIHSKDIFHSLTISFSRCWE 2025          
BLAST of mRNA_M-pyrifera_M_contig76103.17951.1 vs. uniprot
Match: G9KHP0_MUSPF (DNA polymerase epsilon catalytic subunit (Fragment) n=1 Tax=Mustela putorius furo TaxID=9669 RepID=G9KHP0_MUSPF)

HSP 1 Score: 190 bits (482), Expect = 4.410e-52
Identity = 100/249 (40.16%), Postives = 155/249 (62.25%), Query Frame = 1
Query:    1 ARLLQRNNHVLWVSDTNNPDVGMREEDNCKFVEELRHP---ERAVPGCYTTVCIQLQLRNLAINTILESHHVHDIEGIAKLSQHKAAFQQQS--DVTSGRQQKGKEEETAAMADSLDDTDACLPAFRVLKNLITQWHLEVGSSPEVRNEHAEMLLDHFFRWASSSRAYLFDTALQQLIHTLMRKVFFQLLAEFKKLGSKVVHANFHQITICTTKRSREDAVNYCNFICKTIGMRPLFSHIGLQPVRFWD 732
            AR LQR++H+LW+S T+ PD+G +E D+ + V E       E   PGCY+TVC++L L+NLA+NTIL+SHH++D+EG   +       QQ S  D+ +G Q        A+   S D+T  C   FR+LK+++  W  E+    + RN +A+  + HF+RW  +  + L D AL + +H++M+K+F QL+AEFK+LGS VV+ANF++I +CT KR  EDA+ Y  ++  +I  + LF  + +   R W+
Sbjct:  203 ARHLQRHSHLLWLSPTSRPDLGGKEADDNRLVMEFDDQASVEINCPGCYSTVCVELDLQNLAVNTILQSHHINDMEGADSVGISFDVLQQASLEDMITGNQ-------AASALASYDETALCSSTFRILKSMVVGWVKEIT---QYRNVYADNQVMHFYRWLRAPSSLLHDPALHRTLHSMMKKLFLQLIAEFKRLGSSVVYANFNRIILCTKKRRVEDALAYVEYVTNSIHSKELFHSLTISFSRSWE 441          
BLAST of mRNA_M-pyrifera_M_contig76103.17951.1 vs. uniprot
Match: A0A480X9Z1_PIG (DNA polymerase epsilon catalytic subunit (Fragment) n=1 Tax=Sus scrofa TaxID=9823 RepID=A0A480X9Z1_PIG)

HSP 1 Score: 188 bits (478), Expect = 4.470e-52
Identity = 101/249 (40.56%), Postives = 153/249 (61.45%), Query Frame = 1
Query:    1 ARLLQRNNHVLWVSDTNNPDVGMREEDNCKFVEELRHP---ERAVPGCYTTVCIQLQLRNLAINTILESHHVHDIEGIAKLSQHKAAFQQQS--DVTSGRQQKGKEEETAAMADSLDDTDACLPAFRVLKNLITQWHLEVGSSPEVRNEHAEMLLDHFFRWASSSRAYLFDTALQQLIHTLMRKVFFQLLAEFKKLGSKVVHANFHQITICTTKRSREDAVNYCNFICKTIGMRPLFSHIGLQPVRFWD 732
            AR LQR+NH+LW+S T+ PD+G +E D+ + V E       E    GCY+TVC++L ++NLA+NTIL+SHHV+D+EG   +       QQ S  D+ +G Q        A+   S D+T  C   FR+LK+++  W  E+    + RN +A+  + HF+RW  S  + L D AL + +H +M+K+F QL+AEFK+LGS VV+ANF++I +CT KR  EDA+ Y  +I  +I  + +F  + +   R W+
Sbjct:  387 ARHLQRHNHLLWLSPTSRPDLGGKEADDNRLVMEFDDQAPVEINSSGCYSTVCVELDIQNLAVNTILQSHHVNDMEGADSMGVSFDVIQQASLEDMITGNQ-------AASAPASYDETALCSSTFRILKSMVVGWVKEIT---QYRNVYADNQVMHFYRWLRSPSSLLHDPALHRTLHGMMKKLFLQLIAEFKRLGSSVVYANFNRIILCTKKRRVEDALAYVEYITNSIHSKEIFHSLTISFSRCWE 625          
BLAST of mRNA_M-pyrifera_M_contig76103.17951.1 vs. uniprot
Match: D3BMV7_POLPP (DNA polymerase epsilon catalytic subunit n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BMV7_POLPP)

HSP 1 Score: 191 bits (485), Expect = 5.740e-52
Identity = 96/244 (39.34%), Postives = 151/244 (61.89%), Query Frame = 1
Query:    1 ARLLQRNNHVLWVSDTNNPDVGMREEDNCKFVEELRHPERAVPGCYTTVCIQLQLRNLAINTILESHHVHDIEGIAKLSQHKAAFQQQSDVTSGRQQKGKEEETAAMADSLDDTDACLPAFRVLKNLITQWHLEVGSSPEVRNEHAEMLLDHFFRWASSSRAYLFDTALQQLIHTLMRKVFFQLLAEFKKLGSKVVHANFHQITICTTKRSREDAVNYCNFICKTIGMRPLFSHIGLQPVRFWD 732
            +R+L+ +NH+LW+S +N PD+G  EED+ KF EEL   E   PGCY + C +L +  LA+NTILES H+ DIEGI     +    +  +   S  +Q   E+     A +++  ++C   F +L+ ++T+W L++       N   ++LL HF+RW SS  + ++D  + + +H LM+KVF QL+ EFKKLG KV++ NF++I +C+ K S EDA  YC++I   I  + LFS I ++P +FW+
Sbjct: 1713 SRMLKESNHLLWMSLSNCPDLGGSEEDDAKFHEELGKTEINQPGCYNSACFELNIGGLAVNTILESSHLADIEGIIGGQLNNGDSETLNFDNSVDKQPNYEKIVKTSA-AMEQFNSCDKEFNILRKMVTRWSLDLVMGNRRNNPTPDLLLTHFYRWISSPYSGMYDPIIHRTLHGLMKKVFLQLIFEFKKLGCKVIYGNFNRIILCSQKTSIEDAKQYCSYIITVIKKKELFSWITIKPTKFWN 1955          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76103.17951.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7M5WZA3_9CNID1.190e-5442.97DNA polymerase epsilon catalytic subunit n=1 Tax=C... [more]
A0A6J0U8Y0_9SAUR2.590e-5340.96DNA polymerase epsilon catalytic subunit n=11 Tax=... [more]
A0A0B7AER0_9EUPU5.870e-5340.08DNA polymerase epsilon catalytic subunit (Fragment... [more]
UPI0005217A101.670e-5239.84DNA polymerase epsilon catalytic subunit A-like n=... [more]
A0A2I0LKE3_COLLI2.980e-5239.84DNA polymerase epsilon catalytic subunit n=1 Tax=C... [more]
A0A7L4G424_9COLU3.090e-5239.84DNA polymerase epsilon catalytic subunit (Fragment... [more]
A0A8J6DPB7_GALPY4.230e-5241.37DNA polymerase epsilon catalytic subunit n=3 Tax=T... [more]
G9KHP0_MUSPF4.410e-5240.16DNA polymerase epsilon catalytic subunit (Fragment... [more]
A0A480X9Z1_PIG4.470e-5240.56DNA polymerase epsilon catalytic subunit (Fragment... [more]
D3BMV7_POLPP5.740e-5239.34DNA polymerase epsilon catalytic subunit n=1 Tax=P... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig76103contigM-pyrifera_M_contig76103:3..799 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score193.4
Seed ortholog evalue1.3e-46
Seed eggNOG ortholog8932.XP_005502987.1
Preferred namePOLE
KEGG rclassRC02795
KEGG koko:K02324
KEGG ReactionR00375,R00376,R00377,R00378
KEGG Pathwayko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko05166,map00230,map00240,map01100,map03030,map03410,map03420,map05166
KEGG ModuleM00263
Hectar predicted targeting categoryother localisation
GOsGO:0000228,GO:0000278,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006272,GO:0006281,GO:0006284,GO:0006287,GO:0006289,GO:0006297,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007049,GO:0007113,GO:0008150,GO:0008152,GO:0008296,GO:0008297,GO:0008310,GO:0008408,GO:0008622,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0018130,GO:0019438,GO:0022616,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0035265,GO:0040007,GO:0042575,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0045004,GO:0045005,GO:0046483,GO:0048589,GO:0050896,GO:0051716,GO:0061695,GO:0070013,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1990234
EggNOG free text desc.epsilon catalytic subunit
EggNOG OGs38CFB@33154,3BBCV@33208,3CUK2@33213,48B8J@7711,48VCK@7742,4GJH8@8782,COG0417@1,KOG1798@2759
EC2.7.7.7
COG Functional cat.L
Best tax levelAves
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03032,ko03400
Exons2
Model size732
Cds size732
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816660.3709443-CDS-M-pyrifera_M_contig76103:2..3021622816660.3709443-CDS-M-pyrifera_M_contig76103:2..302Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76103 3..302 -
1692278104.1957424-CDS-M-pyrifera_M_contig76103:2..3021692278104.1957424-CDS-M-pyrifera_M_contig76103:2..302Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76103 3..302 -
1622816660.3845766-CDS-M-pyrifera_M_contig76103:367..7991622816660.3845766-CDS-M-pyrifera_M_contig76103:367..799Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76103 368..799 -
1692278104.2093918-CDS-M-pyrifera_M_contig76103:367..7991692278104.2093918-CDS-M-pyrifera_M_contig76103:367..799Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76103 368..799 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig76103.17951.1prot_M-pyrifera_M_contig76103.17951.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig76103 3..799 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig76103.17951.1

>prot_M-pyrifera_M_contig76103.17951.1 ID=prot_M-pyrifera_M_contig76103.17951.1|Name=mRNA_M-pyrifera_M_contig76103.17951.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=244bp
ARLLQRNNHVLWVSDTNNPDVGMREEDNCKFVEELRHPERAVPGCYTTVC
IQLQLRNLAINTILESHHVHDIEGIAKLSQHKAAFQQQSDVTSGRQQKGK
EEETAAMADSLDDTDACLPAFRVLKNLITQWHLEVGSSPEVRNEHAEMLL
DHFFRWASSSRAYLFDTALQQLIHTLMRKVFFQLLAEFKKLGSKVVHANF
HQITICTTKRSREDAVNYCNFICKTIGMRPLFSHIGLQPVRFWD
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mRNA from alignment at M-pyrifera_M_contig76103:3..799-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig76103.17951.1 ID=mRNA_M-pyrifera_M_contig76103.17951.1|Name=mRNA_M-pyrifera_M_contig76103.17951.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=797bp|location=Sequence derived from alignment at M-pyrifera_M_contig76103:3..799- (Macrocystis pyrifera P11B4 male)
GCAAGGCTGCTCCAGCGCAACAACCACGTGCTGTGGGTGTCGGACACGAA CAACCCAGACGTCGGCATGCGAGAGGAGGACAACTGCAAGTTCGTGGAAG AGCTTCGGCACCCCGAGCGAGCTGTGCCTGGCTGCTACACAACGGTGTGC ATCCAACTGCAGCTCCGCAACCTGGCGATCAACACCATCCTCGAGTCTCA CCACGTACACGACATCGAAGGCATTGCGAAGTTGAGTCAGCACAAGGCGG CCTTCCAGCAACAGAGTGACGTGACCAGTGGGAGACAGCAGAAGGGCAAG GAAGAAGAGACTGCCGCCATGGCAGACTCACTCGATGACACCGACGCGTG TCTCCCTGCCTTCCGCGTGCTCAAGAACCTCATCACCCAATGGCACCTCG AGGTGGGTAGCTCTCCAGAAGTGCGCAACGAGGTACGGCTCCTTTCTCTG CTGTGCAGCCCACTTTCTTGTTGCTTGAGTCTCTAACGGCTTCGTAGCAT GCAGAAATGCTGCTTGACCACTTCTTTCGCTGGGCAAGCTCCTCTCGCGC GTACCTCTTCGACACTGCTCTGCAGCAGCTCATCCACACACTCATGAGAA AGGTGTTCTTCCAGCTGCTCGCAGAGTTCAAGAAGCTGGGCTCGAAGGTG GTGCACGCGAACTTCCACCAGATCACCATCTGCACGACGAAGAGAAGCAG AGAAGACGCAGTGAACTACTGTAACTTCATCTGCAAGACCATTGGCATGA GGCCCCTCTTCTCCCACATCGGCCTCCAGCCTGTACGGTTCTGGGAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig76103:3..799-

>mRNA_M-pyrifera_M_contig76103.17951.1 ID=mRNA_M-pyrifera_M_contig76103.17951.1|Name=mRNA_M-pyrifera_M_contig76103.17951.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1464bp|location=Sequence derived from alignment at M-pyrifera_M_contig76103:3..799- (Macrocystis pyrifera P11B4 male)
GCAAGGCTGCTCCAGCGCAACAACCACGTGCTGTGGGTGTCGGACACGAA
CAACCCAGACGTCGGCATGCGAGAGGAGGACAACTGCAAGTTCGTGGAAG
AGCTTCGGCACCCCGAGCGAGCTGTGCCTGGCTGCTACACAACGGTGTGC
ATCCAACTGCAGCTCCGCAACCTGGCGATCAACACCATCCTCGAGTCTCA
CCACGTACACGACATCGAAGGCATTGCGAAGTTGAGTCAGCACAAGGCGG
CCTTCCAGCAACAGAGTGACGTGACCAGTGGGAGACAGCAGAAGGGCAAG
GAAGAAGAGACTGCCGCCATGGCAGACTCACTCGATGACACCGACGCGTG
TCTCCCTGCCTTCCGCGTGCTCAAGAACCTCATCACCCAATGGCACCTCG
AGGTGGGTAGCTCTCCAGAAGTGCGCAACGAGGCAAGGCTGCTCCAGCGC
AACAACCACGTGCTGTGGGTGTCGGACACGAACAACCCAGACGTCGGCAT
GCGAGAGGAGGACAACTGCAAGTTCGTGGAAGAGCTTCGGCACCCCGAGC
GAGCTGTGCCTGGCTGCTACACAACGGTGTGCATCCAACTGCAGCTCCGC
AACCTGGCGATCAACACCATCCTCGAGTCTCACCACGTACACGACATCGA
AGGCATTGCGAAGTTGAGTCAGCACAAGGCGGCCTTCCAGCAACAGAGTG
ACGTGACCAGTGGGAGACAGCAGAAGGGCAAGGAAGAAGAGACTGCCGCC
ATGGCAGACTCACTCGATGACACCGACGCGTGTCTCCCTGCCTTCCGCGT
GCTCAAGAACCTCATCACCCAATGGCACCTCGAGGTGGGTAGCTCTCCAG
AAGTGCGCAACGAGCATGCAGAAATGCTGCTTGACCACTTCTTTCGCTGG
GCAAGCTCCTCTCGCGCGTACCTCTTCGACACTGCTCTGCAGCAGCTCAT
CCACACACTCATGAGAAAGGTGTTCTTCCAGCTGCTCGCAGAGTTCAAGA
AGCTGGGCTCGAAGGTGGTGCACGCGAACTTCCACCAGATCACCATCTGC
ACGACGAAGAGAAGCAGAGAAGACGCAGTGAACTACTGTAACTTCATCTG
CAAGACCATTGGCATGAGGCCCCTCTTCTCCCACATCGGCCTCCAGCCTG
TACGGTTCTGGGACCATGCAGAAATGCTGCTTGACCACTTCTTTCGCTGG
GCAAGCTCCTCTCGCGCGTACCTCTTCGACACTGCTCTGCAGCAGCTCAT
CCACACACTCATGAGAAAGGTGTTCTTCCAGCTGCTCGCAGAGTTCAAGA
AGCTGGGCTCGAAGGTGGTGCACGCGAACTTCCACCAGATCACCATCTGC
ACGACGAAGAGAAGCAGAGAAGACGCAGTGAACTACTGTAACTTCATCTG
CAAGACCATTGGCATGAGGCCCCTCTTCTCCCACATCGGCCTCCAGCCTG
TACGGTTCTGGGAC
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