mRNA_M-pyrifera_M_contig76066.17945.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig76066.17945.1
Unique NamemRNA_M-pyrifera_M_contig76066.17945.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig76066.17945.1 vs. uniprot
Match: UPI00187D7CC8 (phenylalanine--tRNA ligase alpha subunit n=1 Tax=Bradysia coprophila TaxID=38358 RepID=UPI00187D7CC8)

HSP 1 Score: 323 bits (829), Expect = 9.990e-108
Identity = 159/260 (61.15%), Postives = 195/260 (75.00%), Query Frame = 1
Query:   28 DEVVDTVRDNVGKVEKG--EEIPAKVLKEFLRRDFVTKSKRPSFSVVKGPSFAPSRVKESADMTAEMIATGSWRDVKFKAYNFDAEGIPSDGGRLHTLLKVRAEFRRILLEMGFCEMPTARWLESSFWNFDALFQPQSHPARDAHDTFFIKEPEKSSLPDGEYVERVKKMHESGGSGSIGYRYRWSLEESRRNILRTHTTAVSSRMLYAIANQPGGFKPAKLFSIDRVFRNEALDATHLAEFHQVEGVVADYGLSLGHLI 801
            D + D V++++  + KG  ++IP  V  E+ +R  + +    SF + KGP F+ +  K   D+T EM+A G W D+KFKAYNFDA G+P + G+LH LLKVR EFR+I LEMGF EMPT  ++ESSFWNFDALFQPQ HPARDAHDTFF+  P KS     EY+ERVK +H  GG GS GY Y W +EE+++N+LRTHTTAVS+RMLY +ANQPGGFKPAK FSID+VFRNE LDATHLAEFHQVEGV+AD  LSLG LI
Sbjct:   22 DTITDVVQEHLMSINKGLGQDIPDNVRNEYKKRKLLQEVVTKSFIISKGPEFSTTLKKLETDLTVEMLANGQWADLKFKAYNFDALGVPPECGQLHPLLKVRTEFRQIFLEMGFSEMPTNNYVESSFWNFDALFQPQQHPARDAHDTFFVDYPSKSYKFPEEYLERVKTVHSKGGFGSQGYGYDWKIEEAQKNLLRTHTTAVSARMLYKLANQPGGFKPAKYFSIDKVFRNETLDATHLAEFHQVEGVIADVNLSLGELI 281          
BLAST of mRNA_M-pyrifera_M_contig76066.17945.1 vs. uniprot
Match: A0A7S1UU01_9STRA (Phenylalanine--tRNA ligase (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UU01_9STRA)

HSP 1 Score: 325 bits (834), Expect = 1.690e-106
Identity = 168/263 (63.88%), Postives = 202/263 (76.81%), Query Frame = 1
Query:   28 DEVVDTVRDNVGKVEKGE----EIPAKVLKEFLRRDFVTKSKRPSFSVVKGPSFAPSRVKESADMTAEMIATGSWRDVKFKAYNFDAEGIPSDGGRLHTLLKVRAEFRRILLEMGFCEMPTARWLESSFWNFDALFQPQSHPARDAHDTFFIKEP-EKSSLPDGEYVERVKKMHESGGSGSIGYRYRWSLEESRRNILRTHTTAVSSRMLYAIANQPGGFKPAKLFSIDRVFRNEALDATHLAEFHQVEGVVADYGLSLGHLI 801
            D+V D+V+ ++ K+ + E     +  K L    RR  V+ + R S  V KG S+AP RVK++AD+T EM+ +GSW+   FK YNF A G    GG LH LLKVRAEFR+IL+EMGF EMPT +W+ESSFWNFD+LFQPQSHPARDAHDTFFIKEP E  S+P+ EY ERVK MHE GGSGSIGYRY +  EE+ +N+LRTHTTA+SS+MLY +ANQ GGFKPA+ FSIDRVFRNE +DATHL EFHQVEG+VADY LSLG LI
Sbjct:  111 DDVTDSVQQSLKKLIESEGSVDTLDEKTLASLKRRKLVSLATRKSLKVTKGSSYAPKRVKKAADLTKEMLESGSWKTTTFKPYNFAALGEKVGGGYLHPLLKVRAEFRKILMEMGFHEMPTNKWVESSFWNFDSLFQPQSHPARDAHDTFFIKEPAETVSVPE-EYYERVKTMHEKGGSGSIGYRYDFQREEAFKNLLRTHTTAISSQMLYKLANQEGGFKPARYFSIDRVFRNETMDATHLCEFHQVEGLVADYDLSLGDLI 372          
BLAST of mRNA_M-pyrifera_M_contig76066.17945.1 vs. uniprot
Match: U5EMI8_9DIPT (Phenylalanine--tRNA ligase n=1 Tax=Corethrella appendiculata TaxID=1370023 RepID=U5EMI8_9DIPT)

HSP 1 Score: 325 bits (834), Expect = 3.560e-106
Identity = 163/260 (62.69%), Postives = 194/260 (74.62%), Query Frame = 1
Query:   28 DEVVDTVRDNVGKVEKG--EEIPAKVLKEFLRRDFVTKSKRPSFSVVKGPSFAPSRVKESADMTAEMIATGSWRDVKFKAYNFDAEGIPSDGGRLHTLLKVRAEFRRILLEMGFCEMPTARWLESSFWNFDALFQPQSHPARDAHDTFFIKEPEKSSLPDGEYVERVKKMHESGGSGSIGYRYRWSLEESRRNILRTHTTAVSSRMLYAIANQPGGFKPAKLFSIDRVFRNEALDATHLAEFHQVEGVVADYGLSLGHLI 801
            D + D V+  + K+  G   +IP  V  EF +R  + +    SF + KGP F+ S  K   D+T EM+ATG W+D+KFKAYNFDA G P + G+LH L+KVR EFR+I LEMGF EMPT  ++ESSFWNFDALFQPQ HPARDAHDTFF+  P KS     EY+ERVK +H  GG GS GY Y W LEE+++N+LRTHTTAVS+RMLY +ANQPGGFKPAK FSID+VFRNE LDATHLAEFHQVEGVVAD GL+LG LI
Sbjct:  129 DSIDDIVKQQLIKLSSGTKNDIPDNVKNEFKKRKLLQEVVTKSFILTKGPEFSTSLKKLETDLTVEMLATGLWKDLKFKAYNFDALGAPPERGQLHPLMKVRTEFRQIFLEMGFSEMPTNNYVESSFWNFDALFQPQQHPARDAHDTFFVSHPAKSHKFPTEYLERVKTVHSQGGYGSQGYGYDWKLEEAQKNLLRTHTTAVSARMLYKLANQPGGFKPAKYFSIDKVFRNETLDATHLAEFHQVEGVVADVGLTLGDLI 388          
BLAST of mRNA_M-pyrifera_M_contig76066.17945.1 vs. uniprot
Match: B8C1R3_THAPS (Phenylalanine--tRNA ligase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1R3_THAPS)

HSP 1 Score: 324 bits (831), Expect = 1.310e-105
Identity = 161/260 (61.92%), Postives = 200/260 (76.92%), Query Frame = 1
Query:   34 VVDTVRDNVGKVEKG----EEIPAKVLKEFLRRDFVTKSKRPSFSVVKGPSFAPSRVKESADMTAEMIATGSWRDVKFKAYNFDAEGIPSDGGRLHTLLKVRAEFRRILLEMGFCEMPTARWLESSFWNFDALFQPQSHPARDAHDTFFIKEPEKSSLPDGEYVERVKKMHESGGSGSIGYRYRWSLEESRRNILRTHTTAVSSRMLYAIANQPGGFKPAKLFSIDRVFRNEALDATHLAEFHQVEGVVADYGLSLGHLI 801
            V D V+  +GK+++G    + +  K +    RR  +T   R S+++++GPS+AP RVK++AD+T E++ +G W+D  FK YNF   G    GG LH LLKVRAEFR+IL+EMGF EMPT +W+ESSFWNFD+LFQPQSHPARDAHDTFFIKEP ++     EY ERVK MHE GGSGSIGYRY +  EE+ +N+LRTHTTA+SS+MLY +ANQ GGFKPA+ FSIDRVFRNE +DATHL EFHQVEG+VADY LSLG LI
Sbjct:  132 VEDEVKVLLGKLKEGGGGADVLDDKAIAILKRRKLITLVTRKSYTIIRGPSYAPQRVKKAADLTKELLDSGKWKDTPFKEYNFATLGESVGGGYLHPLLKVRAEFRKILMEMGFHEMPTNKWVESSFWNFDSLFQPQSHPARDAHDTFFIKEPAQTVSVPEEYYERVKTMHEVGGSGSIGYRYDFKREEAFKNLLRTHTTAISSQMLYKLANQEGGFKPARYFSIDRVFRNETMDATHLCEFHQVEGLVADYNLSLGDLI 391          
BLAST of mRNA_M-pyrifera_M_contig76066.17945.1 vs. uniprot
Match: T1PEK3_MUSDO (Phenylalanine--tRNA ligase n=4 Tax=Calyptratae TaxID=43742 RepID=T1PEK3_MUSDO)

HSP 1 Score: 324 bits (830), Expect = 1.380e-105
Identity = 160/259 (61.78%), Postives = 198/259 (76.45%), Query Frame = 1
Query:   28 DEVVDTVRDNVGKVEKGE-EIPAKVLKEFLRRDFVTKSKRPSFSVVKGPSFAPSRVKESADMTAEMIATGSWRDVKFKAYNFDAEGIPSDGGRLHTLLKVRAEFRRILLEMGFCEMPTARWLESSFWNFDALFQPQSHPARDAHDTFFIKEPEKSSLPDGEYVERVKKMHESGGSGSIGYRYRWSLEESRRNILRTHTTAVSSRMLYAIANQPGGFKPAKLFSIDRVFRNEALDATHLAEFHQVEGVVADYGLSLGHLI 801
            D++ DTV+ N+  V  G+ ++PA ++ E+ +R  + +    SF + KGP F+ +  K   D+T +M+A+G W+D+KFKAYNFDA G P   G LH LLKVR EFR+I LEMGF EMPT  ++ESSFWNFDALFQPQ HPARDAHDTFFI  P KS     +Y++RVKK+H SGG GS GY Y W LEE+++N+LRTHTTAVS+RMLY +ANQP GFKPAK FSID+VFRNE LDATHLAEFHQVEGV+AD GL+LG LI
Sbjct:  128 DKIEDTVQQNLIAVAAGKTDLPANLVTEYKKRKLLQEITTKSFVLTKGPEFSTTLTKLETDLTVDMLASGLWKDLKFKAYNFDALGAPPTRGHLHPLLKVRTEFRQIFLEMGFSEMPTNNYVESSFWNFDALFQPQQHPARDAHDTFFINHPAKSYKFPQDYLQRVKKVHSSGGYGSQGYGYDWKLEEAQKNLLRTHTTAVSARMLYKLANQPEGFKPAKYFSIDKVFRNETLDATHLAEFHQVEGVIADVGLTLGDLI 386          
BLAST of mRNA_M-pyrifera_M_contig76066.17945.1 vs. uniprot
Match: A0A8J5AG18_9DIPT (Phenylalanine--tRNA ligase n=1 Tax=Bradysia odoriphaga TaxID=1564500 RepID=A0A8J5AG18_9DIPT)

HSP 1 Score: 323 bits (829), Expect = 1.960e-105
Identity = 159/260 (61.15%), Postives = 195/260 (75.00%), Query Frame = 1
Query:   28 DEVVDTVRDNVGKVEKG--EEIPAKVLKEFLRRDFVTKSKRPSFSVVKGPSFAPSRVKESADMTAEMIATGSWRDVKFKAYNFDAEGIPSDGGRLHTLLKVRAEFRRILLEMGFCEMPTARWLESSFWNFDALFQPQSHPARDAHDTFFIKEPEKSSLPDGEYVERVKKMHESGGSGSIGYRYRWSLEESRRNILRTHTTAVSSRMLYAIANQPGGFKPAKLFSIDRVFRNEALDATHLAEFHQVEGVVADYGLSLGHLI 801
            D + D V++++  + KG  ++IP  V  E+ +R  + +    SF + KGP F+ +  K   D+T EM+A G W D+KFKAYNFDA G+P + G+LH LLKVR EFR+I LEMGF EMPT  ++ESSFWNFDALFQPQ HPARDAHDTFF+  P KS     EY+ERVK +H  GG GS GY Y W +EE+++N+LRTHTTAVS+RMLY +ANQPGGFKPAK FSID+VFRNE LDATHLAEFHQVEGV+AD  LSLG LI
Sbjct:  128 DTITDVVQEHLMSINKGLGQDIPDNVRNEYKKRKLLQEVVTKSFIISKGPEFSTTLKKLETDLTVEMLANGQWADLKFKAYNFDALGVPPECGQLHPLLKVRTEFRQIFLEMGFSEMPTNNYVESSFWNFDALFQPQQHPARDAHDTFFVDYPSKSFKFPEEYLERVKTVHSKGGFGSQGYGYDWKIEEAQKNLLRTHTTAVSARMLYKLANQPGGFKPAKYFSIDKVFRNETLDATHLAEFHQVEGVIADVNLSLGELI 387          
BLAST of mRNA_M-pyrifera_M_contig76066.17945.1 vs. uniprot
Match: B7T4R5_DROAI (Phenylalanine--tRNA ligase (Fragment) n=1 Tax=Drosophila affinis TaxID=7246 RepID=B7T4R5_DROAI)

HSP 1 Score: 318 bits (815), Expect = 2.180e-105
Identity = 156/257 (60.70%), Postives = 194/257 (75.49%), Query Frame = 1
Query:   34 VVDTVRDNVGKVEKGE-EIPAKVLKEFLRRDFVTKSKRPSFSVVKGPSFAPSRVKESADMTAEMIATGSWRDVKFKAYNFDAEGIPSDGGRLHTLLKVRAEFRRILLEMGFCEMPTARWLESSFWNFDALFQPQSHPARDAHDTFFIKEPEKSSLPDGEYVERVKKMHESGGSGSIGYRYRWSLEESRRNILRTHTTAVSSRMLYAIANQPGGFKPAKLFSIDRVFRNEALDATHLAEFHQVEGVVADYGLSLGHLI 801
            +VD V++ + +V +G+ ++PA  + +F +R  + ++   SF + KGP FA +  K   D+T +M+  G W+ +KFK+YNFDA G P   G LH LLKVR EFR+I LEMGF EMPT  ++ESSFWNFDALFQPQ HPARDAHDTFFI  P KS     EY+ERVK +H  GG GSIGY Y W LEE+++N+LRTHTTAVS+RML+ +ANQ GGFKPAK FSID+VFRNE LDATHLAEFHQVEGV+AD GL+LG LI
Sbjct:   20 IVDNVKELLNQVAQGKTDLPANEVADFKKRKLLQETTIKSFVLTKGPEFATTLTKLETDLTVDMLTNGLWQQLKFKSYNFDALGAPPTRGHLHPLLKVRTEFRQIFLEMGFSEMPTNNYVESSFWNFDALFQPQQHPARDAHDTFFINHPAKSHKFPQEYLERVKSVHSKGGYGSIGYGYDWKLEEAQKNLLRTHTTAVSARMLFKLANQEGGFKPAKYFSIDKVFRNETLDATHLAEFHQVEGVIADVGLTLGDLI 276          
BLAST of mRNA_M-pyrifera_M_contig76066.17945.1 vs. uniprot
Match: A0A7S1ZTN3_TRICV (Phenylalanine--tRNA ligase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZTN3_TRICV)

HSP 1 Score: 322 bits (826), Expect = 7.660e-105
Identity = 157/229 (68.56%), Postives = 183/229 (79.91%), Query Frame = 1
Query:  115 RRDFVTKSKRPSFSVVKGPSFAPSRVKESADMTAEMIATGSWRDVKFKAYNFDAEGIPSDGGRLHTLLKVRAEFRRILLEMGFCEMPTARWLESSFWNFDALFQPQSHPARDAHDTFFIKEPEKSSLPDGEYVERVKKMHESGGSGSIGYRYRWSLEESRRNILRTHTTAVSSRMLYAIANQPGGFKPAKLFSIDRVFRNEALDATHLAEFHQVEGVVADYGLSLGHLI 801
            +R  VT   R S+SVV+GPS++P R K+S+D+T EM+ +G+WR   FK YNF A G P  GG LH LLKVRAEFRRIL+EMGF EMPT +W+ESSFWNFDALFQPQSHPARDAHDTFFIKEP  +     EY ERVK MHE GGSGSIGYRY +   E+ +N+LRTHTTA+SS+MLY +AN+PGGF P + FSIDRVFRNE +DATHL EFHQVEG+VADY LSLG LI
Sbjct:  167 KRKLVTLVTRKSYSVVRGPSYSPVRTKKSSDLTKEMLDSGAWRTAPFKPYNFAALGEPVGGGYLHPLLKVRAEFRRILMEMGFAEMPTDKWVESSFWNFDALFQPQSHPARDAHDTFFIKEPALTKSVPEEYYERVKSMHERGGSGSIGYRYDFQRGEAMKNLLRTHTTAISSQMLYKLANRPGGFVPQRYFSIDRVFRNETMDATHLCEFHQVEGLVADYDLSLGDLI 395          
BLAST of mRNA_M-pyrifera_M_contig76066.17945.1 vs. uniprot
Match: A0A835YKG3_9STRA (Phenylalanine--tRNA ligase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKG3_9STRA)

HSP 1 Score: 322 bits (824), Expect = 1.360e-104
Identity = 157/264 (59.47%), Postives = 200/264 (75.76%), Query Frame = 1
Query:   22 GGDEVVDTVRDNVGKVEKG----EEIPAKVLKEFLRRDFVTKSKRPSFSVVKGPSFAPSRVKESADMTAEMIATGSWRDVKFKAYNFDAEGIPSDGGRLHTLLKVRAEFRRILLEMGFCEMPTARWLESSFWNFDALFQPQSHPARDAHDTFFIKEPEKSSLPDGEYVERVKKMHESGGSGSIGYRYRWSLEESRRNILRTHTTAVSSRMLYAIANQPGGFKPAKLFSIDRVFRNEALDATHLAEFHQVEGVVADYGLSLGHLI 801
            G D+V DT +D +  +E      E + A+  KE  RR  VT+  R SF V +G  +A  R K++AD+T EM+ +G W+   FK YNF+  G P+ GG LH LLKVRAEFR +L++MGF EMPT RW+ESSFWNFDALFQPQSHPARDAHDTFF+K+P ++     +Y++ V++MHE+GGSGSIGYRY+W  EE+ +N+LRTHTTA+SS+MLY +ANQ GGF+P + FSIDRVFRNE++DATHL EFHQVEG+VAD  LSLG LI
Sbjct:  131 GSDDVRDTTQDKLRALEAAGGALESLSAEDAKELKRRKMVTQIMRKSFKVTRGAQYALERKKKTADLTREMLESGEWKTTSFKEYNFNTLGAPTGGGYLHPLLKVRAEFRNVLMQMGFEEMPTNRWVESSFWNFDALFQPQSHPARDAHDTFFVKDPAQAVSVPADYLKVVQEMHENGGSGSIGYRYKWKREEAMKNLLRTHTTAISSQMLYKLANQEGGFQPKRYFSIDRVFRNESMDATHLCEFHQVEGLVADRNLSLGDLI 394          
BLAST of mRNA_M-pyrifera_M_contig76066.17945.1 vs. uniprot
Match: A0A1Z5KBW2_FISSO (Phenylalanine--tRNA ligase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBW2_FISSO)

HSP 1 Score: 321 bits (822), Expect = 2.980e-104
Identity = 158/239 (66.11%), Postives = 187/239 (78.24%), Query Frame = 1
Query:   85 IPAKVLKEFLRRDFVTKSKRPSFSVVKGPSFAPSRVKESADMTAEMIATGSWRDVKFKAYNFDAEGIPSDGGRLHTLLKVRAEFRRILLEMGFCEMPTARWLESSFWNFDALFQPQSHPARDAHDTFFIKEPEKSSLPDGEYVERVKKMHESGGSGSIGYRYRWSLEESRRNILRTHTTAVSSRMLYAIANQPGGFKPAKLFSIDRVFRNEALDATHLAEFHQVEGVVADYGLSLGHLI 801
            I ++V K   +R  +  + R S  V +GPS+AP R +++AD+T EM+ TG+W+  +FK YNF A G    GG LH LLKVRAEFR+ILLEMGF EMPT +W+ESSFWNFD+LFQPQSHPARDAHDTFFIKEP  +     EY ERVK MHE GGSGSIGYRY +  EE+ +N+LRTHTTAVSS+MLY +ANQ GGFKPA+ FSIDRVFRNE +DATHL EFHQVEG+VADY LSLG LI
Sbjct:  157 ISSEVSKALKKRKLINLTIRKSMKVARGPSYAPVRKRKAADLTKEMLETGAWQTTEFKPYNFQAFGEKVGGGYLHPLLKVRAEFRKILLEMGFAEMPTNKWVESSFWNFDSLFQPQSHPARDAHDTFFIKEPASTVSVPEEYYERVKTMHEVGGSGSIGYRYDFKREEAFKNLLRTHTTAVSSQMLYKLANQEGGFKPARYFSIDRVFRNETMDATHLCEFHQVEGLVADYDLSLGDLI 395          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76066.17945.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00187D7CC89.990e-10861.15phenylalanine--tRNA ligase alpha subunit n=1 Tax=B... [more]
A0A7S1UU01_9STRA1.690e-10663.88Phenylalanine--tRNA ligase (Fragment) n=1 Tax=Gram... [more]
U5EMI8_9DIPT3.560e-10662.69Phenylalanine--tRNA ligase n=1 Tax=Corethrella app... [more]
B8C1R3_THAPS1.310e-10561.92Phenylalanine--tRNA ligase n=1 Tax=Thalassiosira p... [more]
T1PEK3_MUSDO1.380e-10561.78Phenylalanine--tRNA ligase n=4 Tax=Calyptratae Tax... [more]
A0A8J5AG18_9DIPT1.960e-10561.15Phenylalanine--tRNA ligase n=1 Tax=Bradysia odorip... [more]
B7T4R5_DROAI2.180e-10560.70Phenylalanine--tRNA ligase (Fragment) n=1 Tax=Dros... [more]
A0A7S1ZTN3_TRICV7.660e-10568.56Phenylalanine--tRNA ligase n=1 Tax=Trieres chinens... [more]
A0A835YKG3_9STRA1.360e-10459.47Phenylalanine--tRNA ligase n=2 Tax=Tribonema minus... [more]
A0A1Z5KBW2_FISSO2.980e-10466.11Phenylalanine--tRNA ligase n=2 Tax=Fistulifera sol... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig76066contigM-pyrifera_M_contig76066:3..803 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score328.6
Seed ortholog evalue2.8e-87
Seed eggNOG ortholog35128.Thaps25960
Preferred nameFARSA
KEGG rclassRC00055,RC00523
KEGG koko:K01889
KEGG ReactionR03660
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
Hectar predicted targeting categoryother localisation
GOsGO:0000122,GO:0002161,GO:0002181,GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006355,GO:0006357,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006450,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016070,GO:0016787,GO:0016788,GO:0016874,GO:0016875,GO:0019219,GO:0019222,GO:0019538,GO:0019752,GO:0022607,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051259,GO:0051262,GO:0051290,GO:0051291,GO:0052689,GO:0060255,GO:0065003,GO:0065007,GO:0065008,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.phenylalanyl-tRNA aminoacylation
EggNOG OGs2XB7H@2836,COG0016@1,KOG2784@2759
EC6.1.1.20
COG Functional cat.J
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016
Exons1
Model size801
Cds size801
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816659.9332085-CDS-M-pyrifera_M_contig76066:2..8031622816659.9332085-CDS-M-pyrifera_M_contig76066:2..803Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76066 3..803 -
1692278103.9510224-CDS-M-pyrifera_M_contig76066:2..8031692278103.9510224-CDS-M-pyrifera_M_contig76066:2..803Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76066 3..803 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig76066.17945.1prot_M-pyrifera_M_contig76066.17945.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig76066 3..803 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig76066.17945.1

>prot_M-pyrifera_M_contig76066.17945.1 ID=prot_M-pyrifera_M_contig76066.17945.1|Name=mRNA_M-pyrifera_M_contig76066.17945.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=267bp
MQAGGGDGGDEVVDTVRDNVGKVEKGEEIPAKVLKEFLRRDFVTKSKRPS
FSVVKGPSFAPSRVKESADMTAEMIATGSWRDVKFKAYNFDAEGIPSDGG
RLHTLLKVRAEFRRILLEMGFCEMPTARWLESSFWNFDALFQPQSHPARD
AHDTFFIKEPEKSSLPDGEYVERVKKMHESGGSGSIGYRYRWSLEESRRN
ILRTHTTAVSSRMLYAIANQPGGFKPAKLFSIDRVFRNEALDATHLAEFH
QVEGVVADYGLSLGHLI
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mRNA from alignment at M-pyrifera_M_contig76066:3..803-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig76066.17945.1 ID=mRNA_M-pyrifera_M_contig76066.17945.1|Name=mRNA_M-pyrifera_M_contig76066.17945.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=801bp|location=Sequence derived from alignment at M-pyrifera_M_contig76066:3..803- (Macrocystis pyrifera P11B4 male)
ATGCAGGCCGGAGGTGGTGATGGAGGTGATGAGGTCGTGGACACTGTGCG TGACAATGTTGGGAAAGTGGAGAAAGGAGAAGAGATTCCAGCAAAGGTCT TGAAAGAGTTCCTTCGTCGAGATTTTGTTACAAAGTCAAAAAGGCCATCT TTTTCAGTCGTCAAGGGCCCATCCTTCGCACCATCTCGGGTAAAGGAAAG TGCTGATATGACAGCGGAAATGATTGCAACTGGGTCGTGGCGAGACGTCA AATTCAAGGCATACAACTTTGATGCTGAAGGAATCCCCAGTGATGGTGGA AGGTTGCATACTCTTCTCAAAGTACGTGCAGAATTCCGACGTATTTTGTT GGAAATGGGTTTTTGTGAAATGCCAACAGCACGATGGCTTGAAAGTTCCT TCTGGAATTTTGATGCATTGTTCCAACCACAATCACATCCTGCAAGAGAT GCACATGACACATTTTTCATCAAAGAACCTGAGAAGAGTTCCTTGCCAGA TGGAGAATACGTGGAACGCGTAAAGAAGATGCATGAATCAGGAGGAAGTG GATCCATTGGATATCGGTATCGTTGGTCTCTCGAAGAATCTCGACGCAAC ATTCTCCGAACCCACACAACTGCAGTGTCCAGCCGCATGCTGTATGCTAT TGCAAACCAACCAGGTGGATTCAAACCAGCAAAACTCTTCTCCATTGATC GTGTCTTCCGAAACGAAGCACTTGATGCCACGCACTTGGCAGAATTCCAC CAAGTTGAAGGTGTCGTTGCTGATTATGGCCTCTCTCTTGGTCACTTGAT T
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig76066:3..803-

>mRNA_M-pyrifera_M_contig76066.17945.1 ID=mRNA_M-pyrifera_M_contig76066.17945.1|Name=mRNA_M-pyrifera_M_contig76066.17945.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1602bp|location=Sequence derived from alignment at M-pyrifera_M_contig76066:3..803- (Macrocystis pyrifera P11B4 male)
ATGCAGGCCGGAGGTGGTGATGGAGGTGATGAGGTCGTGGACACTGTGCG
TGACAATGTTGGGAAAGTGGAGAAAGGAGAAGAGATTCCAGCAAAGGTCT
TGAAAGAGTTCCTTCGTCGAGATTTTGTTACAAAGTCAAAAAGGCCATCT
TTTTCAGTCGTCAAGGGCCCATCCTTCGCACCATCTCGGGTAAAGGAAAG
TGCTGATATGACAGCGGAAATGATTGCAACTGGGTCGTGGCGAGACGTCA
AATTCAAGGCATACAACTTTGATGCTGAAGGAATCCCCAGTGATGGTGGA
AGGTTGCATACTCTTCTCAAAGTACGTGCAGAATTCCGACGTATTTTGTT
GGAAATGGGTTTTTGTGAAATGCCAACAGCACGATGGCTTGAAAGTTCCT
TCTGGAATTTTGATGCATTGTTCCAACCACAATCACATCCTGCAAGAGAT
GCACATGACACATTTTTCATCAAAGAACCTGAGAAGAGTTCCTTGCCAGA
TGGAGAATACGTGGAACGCGTAAAGAAGATGCATGAATCAGGAGGAAGTG
GATCCATTGGATATCGGTATCGTTGGTCTCTCGAAGAATCTCGACGCAAC
ATTCTCCGAACCCACACAACTGCAGTGTCCAGCCGCATGCTGTATGCTAT
TGCAAACCAACCAGGTGGATTCAAACCAGCAAAACTCTTCTCCATTGATC
GTGTCTTCCGAAACGAAGCACTTGATGCCACGCACTTGGCAGAATTCCAC
CAAGTTGAAGGTGTCGTTGCTGATTATGGCCTCTCTCTTGGTCACTTGAT
TATGCAGGCCGGAGGTGGTGATGGAGGTGATGAGGTCGTGGACACTGTGC
GTGACAATGTTGGGAAAGTGGAGAAAGGAGAAGAGATTCCAGCAAAGGTC
TTGAAAGAGTTCCTTCGTCGAGATTTTGTTACAAAGTCAAAAAGGCCATC
TTTTTCAGTCGTCAAGGGCCCATCCTTCGCACCATCTCGGGTAAAGGAAA
GTGCTGATATGACAGCGGAAATGATTGCAACTGGGTCGTGGCGAGACGTC
AAATTCAAGGCATACAACTTTGATGCTGAAGGAATCCCCAGTGATGGTGG
AAGGTTGCATACTCTTCTCAAAGTACGTGCAGAATTCCGACGTATTTTGT
TGGAAATGGGTTTTTGTGAAATGCCAACAGCACGATGGCTTGAAAGTTCC
TTCTGGAATTTTGATGCATTGTTCCAACCACAATCACATCCTGCAAGAGA
TGCACATGACACATTTTTCATCAAAGAACCTGAGAAGAGTTCCTTGCCAG
ATGGAGAATACGTGGAACGCGTAAAGAAGATGCATGAATCAGGAGGAAGT
GGATCCATTGGATATCGGTATCGTTGGTCTCTCGAAGAATCTCGACGCAA
CATTCTCCGAACCCACACAACTGCAGTGTCCAGCCGCATGCTGTATGCTA
TTGCAAACCAACCAGGTGGATTCAAACCAGCAAAACTCTTCTCCATTGAT
CGTGTCTTCCGAAACGAAGCACTTGATGCCACGCACTTGGCAGAATTCCA
CCAAGTTGAAGGTGTCGTTGCTGATTATGGCCTCTCTCTTGGTCACTTGA
TT
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