mRNA_M-pyrifera_M_contig76058.17943.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig76058.17943.1 vs. uniprot
Match: UPI0019F10434 (Cadherin domain-containing protein n=1 Tax=Leptolyngbyaceae cyanobacterium T60_A2020_046 TaxID=2747813 RepID=UPI0019F10434) HSP 1 Score: 89.0 bits (219), Expect = 3.070e-17 Identity = 62/184 (33.70%), Postives = 98/184 (53.26%), Query Frame = 1 Query: 7 IRTTGPIDYEEHANFTLLVTVTDDHPTDPRNSTGTVYVSIINLNDPPRMEDHTIYIKENVGVGKKIGTPVDAVDDDGDPLLFELLTGDDRSQFFLDNSTGQFYVAREGFLDFEADPEEFLSIFTLLVAVSD---AEFSIIASVTLEVVDAQDPPFISSSDTVLVVPELSAPGTSVGTVATSDQD 549 + + +D+E A FTL V V++ T + TV + ++++N+PP +ED + + EN + +GT + D G L +E+++G++ F +D +TG+ VA LDFE FTL + V+D S A+VT+E++D + P I D L VPE S GTSVG V +D D Sbjct: 577 VNNSAALDFETVALFTLTVQVSNGSETRSK----TVSIQLLDVNEPPIIEDQVLSVPENSPLDTVVGTVSVSDPDAGQTLTYEIISGNESGAFAIDPATGEITVANSALLDFETQDT-----FTLEIQVTDDADEPLSSTATVTIEILDGNEAPIIR--DQALAVPENSPLGTSVGFVEAADPD 749
BLAST of mRNA_M-pyrifera_M_contig76058.17943.1 vs. uniprot
Match: A0A5A8DVV5_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DVV5_CAFRO) HSP 1 Score: 78.2 bits (191), Expect = 1.750e-13 Identity = 58/179 (32.40%), Postives = 94/179 (52.51%), Query Frame = 1 Query: 25 IDYEEHANFTLLVTVTDDHPTDPR----NSTGTVYVSIINLNDPPRMEDHTIYIKENVGVGKKIGTPVDAVDDDGDPLLFELLTGDDRSQFFLDNSTGQFYVAREGFLDFEADPEEFLSIFTLLVAVSD-------AEFSIIASVTLEVVDAQDPP-FISSSDTVLVVPELSAPGTSVG 525 +D+E +++TL V V DD +P T TV +S+I++N+PP ++D I EN G +G V D + L + ++ G+ S F +D+++GQ VA LDFE+ + FTL V +D A F A V + V+D +PP F++ ++L E SA G+++G Sbjct: 1506 LDFETKSSYTLTVQVQDDGAAEPGPARLTDTATVTISVIDVNEPPTLQDAAASIAENSAQGTPVGAAVTGTDPERSVLAYSIVGGNTGSAFAIDSTSGQISVASSAALDFES-----VKAFTLRVRATDDGKPKGPALFGE-ADVVVSVLDVNEPPVFLAQQRSIL---ENSAAGSAIG 1675
BLAST of mRNA_M-pyrifera_M_contig76058.17943.1 vs. uniprot
Match: A0A5A8CG85_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CG85_CAFRO) HSP 1 Score: 78.2 bits (191), Expect = 1.760e-13 Identity = 57/178 (32.02%), Postives = 93/178 (52.25%), Query Frame = 1 Query: 25 IDYEEHANFTLLVTVTDDHPTDPRNS----TGTVYVSIINLNDPPRMEDHTIYIKENVGVGKKIGTPVDAVDDDGDPLLFELLTGDDRSQFFLDNSTGQFYVAREGFLDFEADPEEFLSIFTLLVAVSD------AEFSIIASVTLEVVDAQDPP-FISSSDTVLVVPELSAPGTSVG 525 +D+E +++TL V V DD +P + T TV +S+I++N+PP ++D I EN G +G V D + L + ++ G+ S F +D++TGQ VA LDFE+ + FTL V +D A V + V+D +PP F++ ++L E SA G+++G Sbjct: 1469 LDFETKSSYTLTVQVQDDGAAEPGPARLADTATVTISVIDVNEPPTLQDAAASIAENSAQGTPVGAAVTGTDPERSVLAYSIVGGNTGSAFAIDSTTGQISVASSAALDFES-----VKAFTLRVRATDDGKPNGPHLFGEADVEVSVLDVNEPPVFLAQQRSIL---ENSAAGSAIG 1638
BLAST of mRNA_M-pyrifera_M_contig76058.17943.1 vs. uniprot
Match: A0A5A8DQT2_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DQT2_CAFRO) HSP 1 Score: 77.8 bits (190), Expect = 2.410e-13 Identity = 58/179 (32.40%), Postives = 95/179 (53.07%), Query Frame = 1 Query: 25 IDYEEHANFTLLVTVTDDHPTDPRNS----TGTVYVSIINLNDPPRMEDHTIYIKENVGVGKKIGTPVDAVDDDGDPLLFELLTGDDRSQFFLDNSTGQFYVAREGFLDFEADPEEFLSIFTLLVAVSD-------AEFSIIASVTLEVVDAQDPP-FISSSDTVLVVPELSAPGTSVG 525 +D+E +++TL V V DD +P + T TV +S+I++N+PP ++D I EN G +G V D + L + ++ G+ S F +D+++GQ VA LDFE+ + FTL V +D A F A V + V+D +PP F++ ++L E SA G+++G Sbjct: 1299 LDFETKSSYTLTVQVQDDGAAEPGPARLADTATVTISVIDVNEPPTLQDAAASIAENSAQGTPVGAAVTGTDPERSVLAYSIVGGNTGSAFAIDSTSGQISVASSAALDFES-----VKAFTLRVRATDDGKPNGPALFGE-ADVVVSVLDVNEPPVFLAQQRSIL---ENSAAGSAIG 1468
BLAST of mRNA_M-pyrifera_M_contig76058.17943.1 vs. uniprot
Match: A0A5A8C299_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C299_CAFRO) HSP 1 Score: 77.4 bits (189), Expect = 3.280e-13 Identity = 59/179 (32.96%), Postives = 94/179 (52.51%), Query Frame = 1 Query: 25 IDYEEHANFTLLVTVTDDHPTDPR----NSTGTVYVSIINLNDPPRMEDHTIYIKENVGVGKKIGTPVDAVDDDGDPLLFELLTGDDRSQFFLDNSTGQFYVAREGFLDFEADPEEFLSIFTLLVAVSD-------AEFSIIASVTLEVVDAQDPP-FISSSDTVLVVPELSAPGTSVG 525 +D+E +++TL V V DD +P T TV +S+I++N+PP ++D I EN G +G V D + L + L+ G+ S F +D+++GQ VA LDFE+ + FTL V +D A F A V + V+D +PP F++ ++L E SA G+++G Sbjct: 1420 LDFETTSSYTLTVQVQDDGAAEPGPARLTDTATVTISVIDVNEPPTLQDAAASIAENSAQGTPVGAAVTGTDPEHSVLAYSLVGGNTGSAFAIDSASGQISVASSVALDFES-----VKAFTLRVRATDDGKPNGPALFGE-ADVVVSVLDVNEPPAFLAQQRSIL---ENSAAGSAIG 1589
BLAST of mRNA_M-pyrifera_M_contig76058.17943.1 vs. uniprot
Match: A0A5A8CAH2_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CAH2_CAFRO) HSP 1 Score: 77.0 bits (188), Expect = 4.350e-13 Identity = 58/179 (32.40%), Postives = 94/179 (52.51%), Query Frame = 1 Query: 25 IDYEEHANFTLLVTVTDDHPTDPR----NSTGTVYVSIINLNDPPRMEDHTIYIKENVGVGKKIGTPVDAVDDDGDPLLFELLTGDDRSQFFLDNSTGQFYVAREGFLDFEADPEEFLSIFTLLVAVSD-------AEFSIIASVTLEVVDAQDPP-FISSSDTVLVVPELSAPGTSVG 525 +D+E +++TL V V DD +P T TV +S+I++N+PP ++D I EN G +G V D + L + ++ G+ S F +D+++GQ VA LDFE+ + FTL V +D A F A V + V+D +PP F++ ++L E SA G+++G Sbjct: 1362 LDFETKSSYTLTVQVQDDGAAEPGPARLTDTATVTISVIDVNEPPTLQDAAASIAENSAQGTPVGAAVTGTDPERSVLAYSIVGGNTGSAFAIDSASGQISVASSVALDFES-----VKAFTLRVRATDDGKPNGPALFGE-ADVVVSVLDVNEPPVFLAQQRSIL---ENSAAGSAIG 1531
BLAST of mRNA_M-pyrifera_M_contig76058.17943.1 vs. uniprot
Match: A0A5A8C3A3_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C3A3_CAFRO) HSP 1 Score: 76.3 bits (186), Expect = 8.050e-13 Identity = 56/178 (31.46%), Postives = 92/178 (51.69%), Query Frame = 1 Query: 25 IDYEEHANFTLLVTVTDDHPTDPRNS----TGTVYVSIINLNDPPRMEDHTIYIKENVGVGKKIGTPVDAVDDDGDPLLFELLTGDDRSQFFLDNSTGQFYVAREGFLDFEADPEEFLSIFTLLVAVSD------AEFSIIASVTLEVVDAQDPP-FISSSDTVLVVPELSAPGTSVG 525 +D+E +++TL V V DD +P + T TV +S+I++N+PP ++D I EN G +G V D + L + + G+ S F +D+++GQ VA LDFE+ + FTL V +D A V + V+D +PP F++ ++L E SA G+++G Sbjct: 1299 LDFETKSSYTLTVQVQDDGAAEPGPARLADTATVTISVIDVNEPPTLQDAAASIAENSAQGTPVGAAVTGTDPERSVLAYSIAGGNTGSAFAIDSTSGQISVASSAALDFES-----VKAFTLRVRATDDGKPNGPHLFGEADVVVSVLDVNEPPVFLAQQRSIL---ENSAAGSAIG 1468
BLAST of mRNA_M-pyrifera_M_contig76058.17943.1 vs. uniprot
Match: A0A5A8D0F5_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D0F5_CAFRO) HSP 1 Score: 75.1 bits (183), Expect = 1.990e-12 Identity = 62/186 (33.33%), Postives = 93/186 (50.00%), Query Frame = 1 Query: 25 IDYEEHANFTLLVTVTDDHPTDPRNS----TGTVYVSIINLNDPPRMEDHTIYIKENVGVGKKIGTPVDAVDDDGDPLLFELLTGDDRSQFFLDNSTGQFYVAREGFLDFEADPEEFLSIFTLLVAVSD-------AEFSIIASVTLEVVDAQDPPFISSSDTVLVVPELSAPGTSVGTVATSDQD 549 +D+E +++TL V V DD +P + T TV +S+I++N+PP ++D I EN G +G V D + L + ++ G+ S F +D+++GQ VA LDFE+ + FTL V +D A F A V + V+D +PP +V E S GTS G A S QD Sbjct: 1435 LDFETKSSYTLTVQVQDDGAAEPGPARLADTATVTISVIDVNEPPTLQDAAASIAENSAQGTPVGAAVTGTDPERSVLAYSIVGGNTGSAFAIDSTSGQISVASSVALDFES-----VKAFTLRVRATDDGKPNGPALFGE-ADVVVSVLDVNEPPVFPPQTREVV--ENSRGGTSFG-AALSAQD 1611
BLAST of mRNA_M-pyrifera_M_contig76058.17943.1 vs. uniprot
Match: A0A5A8CC96_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CC96_CAFRO) HSP 1 Score: 75.1 bits (183), Expect = 2.060e-12 Identity = 56/178 (31.46%), Postives = 91/178 (51.12%), Query Frame = 1 Query: 25 IDYEEHANFTLLVTVTDDHPTDPR----NSTGTVYVSIINLNDPPRMEDHTIYIKENVGVGKKIGTPVDAVDDDGDPLLFELLTGDDRSQFFLDNSTGQFYVAREGFLDFEADPEEFLSIFTLLVAVSD------AEFSIIASVTLEVVDAQDPP-FISSSDTVLVVPELSAPGTSVG 525 +D+E +++TL V V DD +P T TV +S+I++N+PP ++D I EN G +G V D + L + + G+ S F +D+++GQ VA LDFE+ + FTL V +D A V + V+D +PP F++ ++L E SA G+++G Sbjct: 1484 LDFETKSSYTLTVQVQDDGAAEPGPARLTDTATVTISVIDVNEPPTLQDAAASIAENSAQGTPVGAAVTGTDPERSVLAYSIAGGNTGSAFAIDSASGQISVASSVALDFES-----VKAFTLRVRATDDGKPKGPTLFGEADVVVSVLDVNEPPVFLAQQRSIL---ENSAAGSAIG 1653
BLAST of mRNA_M-pyrifera_M_contig76058.17943.1 vs. uniprot
Match: A0A5A8E6G2_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E6G2_CAFRO) HSP 1 Score: 75.1 bits (183), Expect = 2.060e-12 Identity = 61/186 (32.80%), Postives = 93/186 (50.00%), Query Frame = 1 Query: 25 IDYEEHANFTLLVTVTDDHPTDPRNS----TGTVYVSIINLNDPPRMEDHTIYIKENVGVGKKIGTPVDAVDDDGDPLLFELLTGDDRSQFFLDNSTGQFYVAREGFLDFEADPEEFLSIFTLLVAVSD-------AEFSIIASVTLEVVDAQDPPFISSSDTVLVVPELSAPGTSVGTVATSDQD 549 +D+E +++TL V V DD +P + T TV +S+I++N+PP ++D I EN G +G V D + L + ++ G+ S F +D+++GQ VA LDFE+ + FTL V +D A F A V + ++D +PP +V E S GTS G A S QD Sbjct: 1448 LDFETKSSYTLTVQVQDDGAAEPGPARLADTATVTISVIDVNEPPTLQDAAASIAENSAQGTPVGAAVTGTDPERSVLAYSIVGGNTGSAFAIDSTSGQISVASSAALDFES-----VKAFTLRVRATDDGKPNGPALFGE-ADVVVSMLDVNEPPVFPPQTREVV--ENSRGGTSFG-AALSAQD 1624 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76058.17943.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig76058.17943.1 >prot_M-pyrifera_M_contig76058.17943.1 ID=prot_M-pyrifera_M_contig76058.17943.1|Name=mRNA_M-pyrifera_M_contig76058.17943.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=183bp GQIRTTGPIDYEEHANFTLLVTVTDDHPTDPRNSTGTVYVSIINLNDPPRback to top mRNA from alignment at M-pyrifera_M_contig76058:280..828- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig76058.17943.1 ID=mRNA_M-pyrifera_M_contig76058.17943.1|Name=mRNA_M-pyrifera_M_contig76058.17943.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=549bp|location=Sequence derived from alignment at M-pyrifera_M_contig76058:280..828- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig76058:280..828- >mRNA_M-pyrifera_M_contig76058.17943.1 ID=mRNA_M-pyrifera_M_contig76058.17943.1|Name=mRNA_M-pyrifera_M_contig76058.17943.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1098bp|location=Sequence derived from alignment at M-pyrifera_M_contig76058:280..828- (Macrocystis pyrifera P11B4 male)back to top |