mRNA_M-pyrifera_M_contig76045.17937.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig76045.17937.1
Unique NamemRNA_M-pyrifera_M_contig76045.17937.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig76045.17937.1 vs. uniprot
Match: A0A024US55_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024US55_9STRA)

HSP 1 Score: 203 bits (517), Expect = 8.100e-60
Identity = 104/283 (36.75%), Postives = 163/283 (57.60%), Query Frame = 1
Query:   16 TVRLVVVCDVYSQEANAQGSGGYAQLATLVRQLR-----TEHCLVCLCGDFLAGSSLADKFKGENVVAVLNEIGVDVVVFGNHEFDYGDDVLLQRISESSALWLGTNVIDKRTGEPFGGTADRHCFSFTFPPADGSEAATVRLGMFGVCTDDTRVLSYPSDDIEFTNVEDAAKGALDALDEDGADLVVGLTHLALAQDLHLAAALASHRQTLLGGHDHLTHSSLKDGILVMKCGQDAHHVGVIDIHVRASATGKAFHRDWRMVANRHVPADPTVQQLINSYKA 849
            T+  + V DVY    N QG GG A+LATL++  R     T H +  + GDFL+ S   + +KG +++ +LN + +D  V+GNHEFD+G DVL+QR++ES+  W G+NV DK TG   G   D    +  FP    S+   +++GMFG+CT +T  LS+P D +EF  + D +K  +D L   GAD+++ LTH+++A D  LA  +      +LGGHDH   +  +    + K GQ+A+ +G +D  +R           W+M+ N+HV  +  ++ L++ Y A
Sbjct:    8 TLTFLTVNDVYDVVPNEQGRGGMAELATLLQAERSIIPPTHHTITTINGDFLSASQAGEHYKGAHMIDILNRMDIDYAVYGNHEFDFGSDVLVQRVAESNFQWFGSNVRDKVTGNVLGNGLD----TVLFPVGSTSQGGVIQVGMFGICTPETPHLSFPGDKVEFLEIVDTSKRCVDELKARGADVIIALTHVSIAHDKLLAKRVPG-IDVILGGHDHDPFTLYQGKTFIHKSGQNAYWLGRVDFVIRKRGDKVTVSPGWKMLVNQHVTPEAGIEALVHKYMA 285          
BLAST of mRNA_M-pyrifera_M_contig76045.17937.1 vs. uniprot
Match: A0A024UUJ0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UUJ0_9STRA)

HSP 1 Score: 203 bits (517), Expect = 2.390e-58
Identity = 104/283 (36.75%), Postives = 163/283 (57.60%), Query Frame = 1
Query:   16 TVRLVVVCDVYSQEANAQGSGGYAQLATLVRQLR-----TEHCLVCLCGDFLAGSSLADKFKGENVVAVLNEIGVDVVVFGNHEFDYGDDVLLQRISESSALWLGTNVIDKRTGEPFGGTADRHCFSFTFPPADGSEAATVRLGMFGVCTDDTRVLSYPSDDIEFTNVEDAAKGALDALDEDGADLVVGLTHLALAQDLHLAAALASHRQTLLGGHDHLTHSSLKDGILVMKCGQDAHHVGVIDIHVRASATGKAFHRDWRMVANRHVPADPTVQQLINSYKA 849
            T+  + V DVY    N QG GG A+LATL++  R     T H +  + GDFL+ S   + +KG +++ +LN + +D  V+GNHEFD+G DVL+QR++ES+  W G+NV DK TG   G   D    +  FP    S+   +++GMFG+CT +T  LS+P D +EF  + D +K  +D L   GAD+++ LTH+++A D  LA  +      +LGGHDH   +  +    + K GQ+A+ +G +D  +R           W+M+ N+HV  +  ++ L++ Y A
Sbjct:    8 TLTFLTVNDVYDVVPNEQGRGGMAELATLLQAERSIIPPTHHTITTINGDFLSASQAGEHYKGAHMIDILNRMDIDYAVYGNHEFDFGSDVLVQRVAESNFQWFGSNVRDKVTGNVLGNGLD----TVLFPVGSTSQGGVIQVGMFGICTPETPHLSFPGDKVEFLEIVDTSKRCVDELKARGADVIIALTHVSIAHDKLLAKRVPG-IDVILGGHDHDPFTLYQGKTFIHKSGQNAYWLGRVDFVIRKRGDKVTVSPGWKMLVNQHVTPEAGIEALVHKYMA 285          
BLAST of mRNA_M-pyrifera_M_contig76045.17937.1 vs. uniprot
Match: A0A425BXC0_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A425BXC0_9STRA)

HSP 1 Score: 199 bits (505), Expect = 2.670e-56
Identity = 111/297 (37.37%), Postives = 167/297 (56.23%), Query Frame = 1
Query:   16 TVRLVV--VCDVYSQEANAQGSGGYAQLATLVRQLRTE-----HCLVCLCGDFLAGSSLADKFKGENVVAVLNEIGVDVVVFGNHEFDYGDDVLLQRISESSALWLGTNVIDKRTGEPFGGTADRHCFSFTFPPADGSEAATVRLGMFGVCTDDTRVLSYPSDDIEFTNVEDAAKGALDALDEDGADLVVGLTHLALAQDLHLAAALASHRQTLLGGHDHLTHSSLKDGILVMKCGQDAHHVGVIDIHVRASAT----GKAFHRDWRMVANRHVPADPTVQQLINSYKAAVHSEHDP 873
            + +LV+  V DVY    N  G GG A+ ATL+ Q +         LV L GDFL+GS +A++FKGE+++ ++N + +D VV GNHEFD+G D L  R+  SSA W G+NV+D  +G  F G  D           DG     ++LG+FGVCT++T  LS+P D ++F N+   ++  +DAL   GAD ++ LTHL++ QD  LA  +      +LGGHDH   +  +    + K GQ+A  +  ++  ++ SA     G      W M+AN ++P  P  QQ++  Y   + SE+DP
Sbjct:   38 SAKLVILSVNDVYDLVPNDHGHGGIAEFATLLEQHKATVPQDVTLLVTLNGDFLSGSEIAERFKGEHIIELMNHLNIDYVVLGNHEFDFGTDELKARMRNSSAKWFGSNVLDSTSGALFEGVVDTEIVDLK----DG-----LKLGVFGVCTEETPTLSFPGDSVKFENIFSTSRRCVDALKVKGADFILALTHLSITQDKRLARQVPG-IDLVLGGHDHDPFTMYEGNTFIHKSGQNALWLAKLEFELKRSAKYPERGLVVLPQWSMIANAYLPPQPACQQILYKYMRQMESENDP 324          
BLAST of mRNA_M-pyrifera_M_contig76045.17937.1 vs. uniprot
Match: A0A0G4IWY2_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IWY2_PLABS)

HSP 1 Score: 197 bits (500), Expect = 1.040e-55
Identity = 125/298 (41.95%), Postives = 162/298 (54.36%), Query Frame = 1
Query:   16 TVRLVVVCDVYSQEANAQGSGGYAQLATLVRQLRTEH---CLVCLCGDFLAGSSLADKFKGENVVAVLNEIGVDVVVFGNHEFDYGDDVLLQRISESSALWLGTNVIDKRTGEPFGGTADRHCFSFTFPPADGSEAATVRLGMFGVCTDDTRVLSYPSDDIEFTNVEDAAKGALDALDEDGADLVVGLTHLALAQDLHLAAALASHRQTLLGGHDHLTHSSLKDGILVMKCGQDAHHVGVIDIHVRAS--ATGKAFHRDWRMVANRHVPADPTVQQLINSYKAAVHSEHDPAYLQEVL 894
            T RLV + DVY+ E  A G GG+A  +TL+ +LR  H   CLV + GDFL GS LA++ KGE V+ +LN IG+D  V GNHEFD+   VL +RI ES   W G NV          G  DR               + +RLG+FGVCT  T  LSYP D   F +V   AK A+ AL ++GADL++ LTHL LA D+ LA         +LGGHDH   S L++G LV+KCGQ+A+ VGV+DIH R    A G  F   + M +  +   DP    ++   +           L EVL
Sbjct:   12 TSRLVTINDVYTFE-KASGHGGFAAASTLINELRRGHQGDCLVTVNGDFLGGSLLAEQSKGEVVIEILNHIGIDACVLGNHEFDFSTSVLERRIGESKFDWYGANVTKLPENRMLPGCIDRKVVV---------TRSGLRLGVFGVCTPATPKLSYPCDLTRFHDVIATAKQAVAALQQEGADLIIALTHLRLAADVDLAKECPE-IHIVLGGHDHDPFSQLQNGQLVLKCGQNAYWVGVVDIHWRRKDGADGIEFFLSYSMHSTCNTDEDPACIDIVRRCQEKFEPVDPDVDLDEVL 298          
BLAST of mRNA_M-pyrifera_M_contig76045.17937.1 vs. uniprot
Match: A0A8K1C2N1_PYTOL (Uncharacterized protein n=2 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C2N1_PYTOL)

HSP 1 Score: 195 bits (496), Expect = 4.930e-55
Identity = 115/305 (37.70%), Postives = 173/305 (56.72%), Query Frame = 1
Query:    7 QVGTVRLVVVCDVYSQEANAQGSGGYAQLATLVRQLRTE-----HCLVCLCGDFLAGSSLADKFKGENVVAVLNEIGVDVVVFGNHEFDYGDDVLLQRISESSALWLGTNVIDKRTGEPFGGTADRHCFSFTFPPADGSEAATVRLGMFGVCTDDTRVLSYPSDDIEFTNVEDAAKGALDALDEDGADLVVGLTHLALAQDLHLAAALASHRQTLLGGHDHLTHSSLKDGILVMKCGQDAHHVGVIDIHVRASATGK----AFHRDWRMVANRHVPADPTVQQLINSYKAAVHSEHDPAYLQEVL 894
            Q   V ++ V DVY    + QG GG A+ ATL+ + R +       LV L GDFL+GS +A++ KG +++ +LN +G++ VV GNHEFD+GD VL +R++ES + W G+NVI+  TG+ F G  D      T    DG     ++LG+FGVCT +T  LSYP D+I F +V   +K  +  L + GAD ++ LTHL++AQD  LA  +      +LGGHDH   +  +   LV K GQ+A  +  ++ H+  S        A    W M+AN+++P   + Q+++  Y  A+    D A  + VL
Sbjct:   29 QNALVVVLSVNDVYDMYPDQQGRGGMAEFATLLERERAKIPAHAKLLVTLNGDFLSGSQVAERHKGAHMIELLNHLGIEYVVLGNHEFDFGDVVLRERMAESRSKWFGSNVIETATGKLFPGVIDTEIVELT----DG-----LKLGVFGVCTQETPNLSYPGDNIVFDDVFATSKRCVRELQDQGADFIIALTHLSIAQDKLLARKVPG-IDVMLGGHDHEPFTLYEGKTLVHKSGQNAFWLARMEFHLSKSGLQPERPLAITPQWTMIANQNIPPQASTQEIVAKYMKALADAEDEADAKRVL 323          
BLAST of mRNA_M-pyrifera_M_contig76045.17937.1 vs. uniprot
Match: A0A2P4X3V3_9STRA (Calcineurin-like phosphoesterase n=12 Tax=Phytophthora TaxID=4783 RepID=A0A2P4X3V3_9STRA)

HSP 1 Score: 191 bits (485), Expect = 2.210e-53
Identity = 107/305 (35.08%), Postives = 167/305 (54.75%), Query Frame = 1
Query:    7 QVGTVRLVVVCDVYSQEANAQGSGGYAQLATLVRQLRTE-----HCLVCLCGDFLAGSSLADKFKGENVVAVLNEIGVDVVVFGNHEFDYGDDVLLQRISESSALWLGTNVIDKRTGEPFGGTADRHCFSFTFPPADGSEAATVRLGMFGVCTDDTRVLSYPSDDIEFTNVEDAAKGALDALDEDGADLVVGLTHLALAQDLHLAAALASHRQTLLGGHDHLTHSSLKDGILVMKCGQDAHHVGVIDIHVRASAT----GKAFHRDWRMVANRHVPADPTVQQLINSYKAAVHSEHDPAYLQEVL 894
            Q   + ++ V DVY    N  G GG A+ ATL+ + +         LV L GDFL+GS +A++FKG +++ ++N +G++ VV GNHEFD+G D L  R+ ES+A W G+NV+D  +G  F    D    +      DG     ++LG+FGVCT++T  LS+P   + F +V   ++  +D L   GAD ++ LTHL+++QD  LA  +      +LGGHDH   +  +    + K GQ+A  +  ++  ++ SA     G      W M+AN ++P  P  QQ++  Y   + SE DP   + VL
Sbjct:   36 QSAKIVILSVNDVYDMVPNEHGHGGIAEFATLLERQKASLPDDVTLLVTLNGDFLSGSEIAERFKGAHMIELMNHLGIEYVVLGNHEFDFGADELKARMQESTAKWFGSNVLDAASGALFDRVVDTEIITLK----DG-----LKLGVFGVCTEETPTLSFPGSSVRFDDVFSTSRRCVDQLRAQGADFILALTHLSISQDKKLARQVPG-IDLMLGGHDHEPFTMYEGKTFIHKSGQNAFWLAKLEFELKRSADHPERGLVILPQWSMIANAYLPPQPACQQILYKYMQQMASEDDPEKNERVL 330          
BLAST of mRNA_M-pyrifera_M_contig76045.17937.1 vs. uniprot
Match: A0A6G0WD55_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WD55_9STRA)

HSP 1 Score: 190 bits (482), Expect = 3.290e-53
Identity = 103/285 (36.14%), Postives = 164/285 (57.54%), Query Frame = 1
Query:   16 TVRLVVVCDVYSQEANAQGSGGYAQLATLVRQLR-----TEHCLVCLCGDFLAGSSLADKFKGENVVAVLNEIGVDVVVFGNHEFDYGDDVLLQRISESSALWLGTNVIDKRTGEPFGGTADRHCFSFTFPPADGSEAATVRLGMFGVCTDDTRVLSYPSDDIEFTNVEDAAKGALDALDEDGADLVVGLTHLALAQDLHLAAALASHRQTLLGGHDHLTHSSLKDGILVMKCGQDAHHVGVIDIHVRA-SATGKA-FHRDWRMVANRHVPADPTVQQLINSYKA 849
            T+  + V DVY    N QG GG A+LA L+   +     T H LV + GDFL+ S   + +KG +++ +LN +  D  V+GNHEFD+G DVL++R+ ES   W G+NV +K TG       D    +   P        +++LGMFGVCT +T  LS+P D + F ++ + +K  ++ L   GAD++V LTH+++A D  LA  +      ++GGHDH   +  +    + K GQ+A+ +G +D  +R  +ATGK     +W+M++NR+V  D +++ L++ Y A
Sbjct:    8 TLTFLTVNDVYDVVPNEQGRGGMAELAALIHHEQLLIPPTNHTLVTINGDFLSASQAGEHYKGAHMIDILNNMKFDYAVYGNHEFDFGSDVLVERVKESKFKWFGSNVREKDTGNTLANALD----TVILPIGPNG---SIKLGMFGVCTQETPQLSFPGDKVIFQDIFETSKRCIEDLKGKGADVIVALTHVSIAHDKLLAKRVPG-IDIIIGGHDHEPFTLYQGNTFIHKSGQNAYWLGRLDFDIRKKAATGKVEIFPEWKMISNRNVTPDASIEALVHKYMA 284          
BLAST of mRNA_M-pyrifera_M_contig76045.17937.1 vs. uniprot
Match: A0A662YCK2_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YCK2_9STRA)

HSP 1 Score: 189 bits (481), Expect = 4.520e-53
Identity = 115/294 (39.12%), Postives = 165/294 (56.12%), Query Frame = 1
Query:    1 GMQVGTVRLVVVCDVYSQEANAQGSGGYAQLATLVRQLRT---EHC--LVCLCGDFLAGSSLADKFKGENVVAVLNEIGVDVVVFGNHEFDYGDDVLLQRISESSALWLGTNVIDKRTGEPFGGTADRHCFSFTFPPADGSEAATVRLGMFGVCTDDTRVLSYPSDDIEFTNVEDAAKGALDALDEDGADLVVGLTHLALAQDLHLAAALASHRQTLLGGHDHLTHSSLKDGILVMKCGQDAHHVGVIDIHV-RASATGKAFHRDWRMVANRHVPADPTVQQLINSYKAAVHSE 864
            G    T+ ++ V DVY    N  G GG A+LATL+ + R    EH   LV L GDFL+GS++++ F+G +++ +LN + V  VV GNHEFD+G  VL QRI ES+A W G+NV D  TG  F G  D          A+G       LG+FGVCT++T  LS+P D + F +V  +A   +  L   GAD ++ LTHL++AQD  LA  +A     +LGGHDH   +  +    + K GQ+A  +  ++I + R    G      W M+AN H+PA P  Q+++  Y  A+ S+
Sbjct:    5 GDHAATLVILSVNDVYDLVPNEHGHGGVAELATLLERERAALPEHATLLVTLNGDFLSGSAMSEHFQGAHMIELLNHLDVGYVVLGNHEFDFGVHVLQQRILESTAKWFGSNVRDAGTGALFSGVVDTEVIQL----ANG-----FTLGVFGVCTEETPSLSFPGDSVVFEDVYTSANRCVVDLQSRGADFILALTHLSIAQDRQLARRVAG-IDVVLGGHDHEPFTLYEGKTFIHKSGQNAFWLAKLEIQLARDPERGLVVLPQWSMLANAHLPAQPACQKILAKYLQAMDSD 288          
BLAST of mRNA_M-pyrifera_M_contig76045.17937.1 vs. uniprot
Match: G5ADQ9_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G5ADQ9_PHYSP)

HSP 1 Score: 190 bits (482), Expect = 6.080e-53
Identity = 108/307 (35.18%), Postives = 168/307 (54.72%), Query Frame = 1
Query:    1 GMQVGTVRLVVVCDVYSQEANAQGSGGYAQLATLVRQLRTE-----HCLVCLCGDFLAGSSLADKFKGENVVAVLNEIGVDVVVFGNHEFDYGDDVLLQRISESSALWLGTNVIDKRTGEPFGGTADRHCFSFTFPPADGSEAATVRLGMFGVCTDDTRVLSYPSDDIEFTNVEDAAKGALDALDEDGADLVVGLTHLALAQDLHLAAALASHRQTLLGGHDHLTHSSLKDGILVMKCGQDAHHVGVIDIHVRASAT----GKAFHRDWRMVANRHVPADPTVQQLINSYKAAVHSEHDPAYLQEVL 894
            G Q   + ++ V DVY    N  G GG A+ ATL+ + +         LV L GDFL+GS + + FKG +++ ++N +G++ VV GNHEFD+G D L  R+ +S+A W G+NV++  TG  F G  D    +      DG     ++LG+FGVCT++T  LS+P   ++F +V   ++  +D L   GAD +V LTHL+++QD  LA ++      +LGGHDH   +  +    + K GQ+A  +  ++  +  SA     G +    W M+AN  +P  P  QQ+I  Y   + S +DP   + VL
Sbjct:   34 GDQRAKLVILSVNDVYDMTPNEHGHGGMAEFATLLERQKAALPEDVTLLVTLNGDFLSGSEMGEHFKGAHMIELMNHLGIEYVVLGNHEFDFGADELKARMRDSTAKWFGSNVLNAATGALFDGVVDTELITLK----DG-----LKLGVFGVCTEETPTLSFPGSTVKFDDVFSTSRRCVDELRAQGADFIVALTHLSISQDKKLARSVPG-IDVMLGGHDHEPFTMYEGKTFIHKSGQNAFWLAKLEFELYRSADHPERGLSVLPQWSMIANARMPPQPACQQIIYKYMREMESANDPEQNERVL 330          
BLAST of mRNA_M-pyrifera_M_contig76045.17937.1 vs. uniprot
Match: H3H1Q6_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H1Q6_PHYRM)

HSP 1 Score: 189 bits (480), Expect = 1.190e-52
Identity = 107/300 (35.67%), Postives = 164/300 (54.67%), Query Frame = 1
Query:    1 GMQVGTVRLVVVCDVYSQEANAQGSGGYAQLATLVRQLRTE-----HCLVCLCGDFLAGSSLADKFKGENVVAVLNEIGVDVVVFGNHEFDYGDDVLLQRISESSALWLGTNVIDKRTGEPFGGTADRHCFSFTFPPADGSEAATVRLGMFGVCTDDTRVLSYPSDDIEFTNVEDAAKGALDALDEDGADLVVGLTHLALAQDLHLAAALASHRQTLLGGHDHLTHSSLKDGILVMKCGQDAHHVGVIDIHVRASAT----GKAFHRDWRMVANRHVPADPTVQQLINSYKAAVHSEHDP 873
            G Q   + ++ V DVY    N  G GG A+ ATL+ + +         LV L GDFL+GS +A+ FKG +++ ++N +G+D VV GNHEFD+G D L  R+ ES A W G+NV+D  +G  F    D    +      DG     ++LG+FGVCT++T  LS+P   ++F +V   ++  ++AL   GAD ++ LTHL+++QD  LA  +      +LGGHDH   + ++    + K GQ+A  +  ++  +  SA     G      W M+AN H+P  P  QQ++  Y   + S  DP
Sbjct:   34 GDQSAKIVVLSVNDVYDMTPNEHGHGGIAEFATLLERQKAALPEDVTLLVTLNGDFLSGSEMAEHFKGAHMIELMNHLGIDYVVLGNHEFDFGADELKTRMRESKAKWFGSNVLDAASGAIFDDVVDTEIITLK----DG-----LKLGVFGVCTEETPTLSFPGSTVKFGDVFSTSRRCVEALKAQGADFILALTHLSISQDKKLARQVPG-IDLVLGGHDHEPFTMVEGKTFIHKSGQNAFWLAKLEFQLTRSAEYPERGLTVLPQWSMIANAHLPPQPACQQILFKYMREMASGDDP 323          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76045.17937.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A024US55_9STRA8.100e-6036.75Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A024UUJ0_9STRA2.390e-5836.75Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A425BXC0_9STRA2.670e-5637.37Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
A0A0G4IWY2_PLABS1.040e-5541.95Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]
A0A8K1C2N1_PYTOL4.930e-5537.70Uncharacterized protein n=2 Tax=Pythium oligandrum... [more]
A0A2P4X3V3_9STRA2.210e-5335.08Calcineurin-like phosphoesterase n=12 Tax=Phytopht... [more]
A0A6G0WD55_9STRA3.290e-5336.14Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A662YCK2_9STRA4.520e-5339.12Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
G5ADQ9_PHYSP6.080e-5335.18Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
H3H1Q6_PHYRM1.190e-5235.67Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig76045contigM-pyrifera_M_contig76045:88..1035 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score203.0
Seed ortholog evalue2e-49
Seed eggNOG ortholog157072.XP_008863123.1
KEGG rclassRC00017
KEGG koko:K01081
KEGG ReactionR00183,R00511,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346
KEGG Pathwayko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110
Hectar predicted targeting categoryother localisation
EggNOG free text desc.nucleotide catabolic process
EggNOG OGsCOG0737@1,KOG4419@2759
EC3.1.3.5
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons2
Model size894
Cds size891
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig76045.17937.1prot_M-pyrifera_M_contig76045.17937.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig76045 91..1035 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816659.5897217-UTR-M-pyrifera_M_contig76045:87..901622816659.5897217-UTR-M-pyrifera_M_contig76045:87..90Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig76045 88..90 +
1692278103.7977636-UTR-M-pyrifera_M_contig76045:87..901692278103.7977636-UTR-M-pyrifera_M_contig76045:87..90Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig76045 88..90 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816659.6041348-CDS-M-pyrifera_M_contig76045:90..7181622816659.6041348-CDS-M-pyrifera_M_contig76045:90..718Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76045 91..718 +
1692278103.8092616-CDS-M-pyrifera_M_contig76045:90..7181692278103.8092616-CDS-M-pyrifera_M_contig76045:90..718Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76045 91..718 +
1622816659.6181557-CDS-M-pyrifera_M_contig76045:772..10351622816659.6181557-CDS-M-pyrifera_M_contig76045:772..1035Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76045 773..1035 +
1692278103.818672-CDS-M-pyrifera_M_contig76045:772..10351692278103.818672-CDS-M-pyrifera_M_contig76045:772..1035Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76045 773..1035 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig76045.17937.1

>prot_M-pyrifera_M_contig76045.17937.1 ID=prot_M-pyrifera_M_contig76045.17937.1|Name=mRNA_M-pyrifera_M_contig76045.17937.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=297bp
MQVGTVRLVVVCDVYSQEANAQGSGGYAQLATLVRQLRTEHCLVCLCGDF
LAGSSLADKFKGENVVAVLNEIGVDVVVFGNHEFDYGDDVLLQRISESSA
LWLGTNVIDKRTGEPFGGTADRHCFSFTFPPADGSEAATVRLGMFGVCTD
DTRVLSYPSDDIEFTNVEDAAKGALDALDEDGADLVVGLTHLALAQDLHL
AAALASHRQTLLGGHDHLTHSSLKDGILVMKCGQDAHHVGVIDIHVRASA
TGKAFHRDWRMVANRHVPADPTVQQLINSYKAAVHSEHDPAYLQEVL
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mRNA from alignment at M-pyrifera_M_contig76045:88..1035+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig76045.17937.1 ID=mRNA_M-pyrifera_M_contig76045.17937.1|Name=mRNA_M-pyrifera_M_contig76045.17937.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=948bp|location=Sequence derived from alignment at M-pyrifera_M_contig76045:88..1035+ (Macrocystis pyrifera P11B4 male)
GGGATGCAGGTGGGCACCGTGCGGCTAGTGGTCGTGTGCGACGTGTATTC ACAAGAGGCCAACGCACAGGGGAGTGGGGGCTATGCACAGCTGGCGACGC TGGTGCGGCAGCTGCGCACGGAGCACTGCCTCGTGTGCCTCTGTGGAGAC TTCCTGGCAGGCAGCTCACTGGCCGACAAGTTCAAGGGCGAGAATGTGGT GGCAGTGCTCAACGAGATTGGCGTGGACGTGGTCGTCTTCGGCAACCACG AGTTCGACTACGGCGACGACGTTCTCCTCCAGCGCATCTCTGAGTCCTCA GCCCTGTGGCTCGGGACGAACGTGATTGATAAGAGGACAGGAGAGCCCTT TGGAGGGACGGCAGACCGCCACTGCTTCTCCTTTACCTTCCCTCCCGCCG ACGGTTCGGAGGCAGCGACGGTGCGGCTGGGGATGTTCGGCGTCTGCACC GACGACACCAGGGTGCTGTCGTATCCCAGCGATGACATTGAGTTCACAAA CGTGGAGGATGCCGCAAAGGGGGCGCTCGATGCACTCGACGAGGATGGCG CCGACCTGGTGGTGGGCCTGACGCACCTGGCCCTCGCCCAAGACCTCCAT CTTGCCGCTGCTCTGGCCTCTCACCGCCAGAGTCGCAACCGCTTGGCAGA CTCTATGCATGATAAGAGGCGCCAGCCAGTGGCAGCCCTCCTAGGCGGCC ACGACCACCTAACACACTCCTCGCTCAAGGACGGCATTCTGGTGATGAAG TGCGGCCAGGATGCGCATCATGTTGGCGTTATCGATATCCACGTGCGAGC CTCGGCTACTGGCAAGGCATTCCACAGAGACTGGCGCATGGTCGCCAACA GGCACGTGCCGGCCGACCCCACTGTACAGCAGCTGATCAACAGCTACAAG GCTGCAGTGCACTCGGAGCACGACCCTGCCTACTTACAGGAGGTGCTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig76045:88..1035+

>mRNA_M-pyrifera_M_contig76045.17937.1 ID=mRNA_M-pyrifera_M_contig76045.17937.1|Name=mRNA_M-pyrifera_M_contig76045.17937.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1782bp|location=Sequence derived from alignment at M-pyrifera_M_contig76045:88..1035+ (Macrocystis pyrifera P11B4 male)
ATGCAGGTGGGCACCGTGCGGCTAGTGGTCGTGTGCGACGTGTATTCACA
AGAGGCCAACGCACAGGGGAGTGGGGGCTATGCACAGCTGGCGACGCTGG
TGCGGCAGCTGCGCACGGAGCACTGCCTCGTGTGCCTCTGTGGAGACTTC
CTGGCAGGCAGCTCACTGGCCGACAAGTTCAAGGGCGAGAATGTGGTGGC
AGTGCTCAACGAGATTGGCGTGGACGTGGTCGTCTTCGGCAACCACGAGT
TCGACTACGGCGACGACGTTCTCCTCCAGCGCATCTCTGAGTCCTCAGCC
CTGTGGCTCGGGACGAACGTGATTGATAAGAGGACAGGAGAGCCCTTTGG
AGGGACGGCAGACCGCCACTGCTTCTCCTTTACCTTCCCTCCCGCCGACG
GTTCGGAGGCAGCGACGGTGCGGCTGGGGATGTTCGGCGTCTGCACCGAC
GACACCAGGGTGCTGTCGTATCCCAGCGATGACATTGAGTTCACAAACGT
GGAGGATGCCGCAAAGGGGGCGCTCGATGCACTCGACGAGGATGGCGCCG
ACCTGGTGGTGGGCCTGACGCACCTGGCCCTCGCCCAAGACCTCCATCTT
GCCGCTGCTCTGGCCTCTCACCGCCAGAATGCAGGTGGGCACCGTGCGGC
TAGTGGTCGTGTGCGACGTGTATTCACAAGAGGCCAACGCACAGGGGAGT
GGGGGCTATGCACAGCTGGCGACGCTGGTGCGGCAGCTGCGCACGGAGCA
CTGCCTCGTGTGCCTCTGTGGAGACTTCCTGGCAGGCAGCTCACTGGCCG
ACAAGTTCAAGGGCGAGAATGTGGTGGCAGTGCTCAACGAGATTGGCGTG
GACGTGGTCGTCTTCGGCAACCACGAGTTCGACTACGGCGACGACGTTCT
CCTCCAGCGCATCTCTGAGTCCTCAGCCCTGTGGCTCGGGACGAACGTGA
TTGATAAGAGGACAGGAGAGCCCTTTGGAGGGACGGCAGACCGCCACTGC
TTCTCCTTTACCTTCCCTCCCGCCGACGGTTCGGAGGCAGCGACGGTGCG
GCTGGGGATGTTCGGCGTCTGCACCGACGACACCAGGGTGCTGTCGTATC
CCAGCGATGACATTGAGTTCACAAACGTGGAGGATGCCGCAAAGGGGGCG
CTCGATGCACTCGACGAGGATGGCGCCGACCTGGTGGTGGGCCTGACGCA
CCTGGCCCTCGCCCAAGACCTCCATCTTGCCGCTGCTCTGGCCTCTCACC
GCCAGACCCTCCTAGGCGGCCACGACCACCTAACACACTCCTCGCTCAAG
GACGGCATTCTGGTGATGAAGTGCGGCCAGGATGCGCATCATGTTGGCGT
TATCGATATCCACGTGCGAGCCTCGGCTACTGGCAAGGCATTCCACAGAG
ACTGGCGCATGGTCGCCAACAGGCACGTGCCGGCCGACCCCACTGTACAG
CAGCTGATCAACAGCTACAAGGCTGCAGTGCACTCGGAGCACGACCCTGC
CTACTTACAGGAGGTGCTCCCCTCCTAGGCGGCCACGACCACCTAACACA
CTCCTCGCTCAAGGACGGCATTCTGGTGATGAAGTGCGGCCAGGATGCGC
ATCATGTTGGCGTTATCGATATCCACGTGCGAGCCTCGGCTACTGGCAAG
GCATTCCACAGAGACTGGCGCATGGTCGCCAACAGGCACGTGCCGGCCGA
CCCCACTGTACAGCAGCTGATCAACAGCTACAAGGCTGCAGTGCACTCGG
AGCACGACCCTGCCTACTTACAGGAGGTGCTC
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