mRNA_M-pyrifera_M_contig7604.17936.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig7604.17936.1
Unique NamemRNA_M-pyrifera_M_contig7604.17936.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig7604.17936.1 vs. uniprot
Match: D8LD57_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD57_ECTSI)

HSP 1 Score: 402 bits (1032), Expect = 2.390e-127
Identity = 259/444 (58.33%), Postives = 295/444 (66.44%), Query Frame = 1
Query:    1 MRTKASRQGDG-----QASPPEVRAGLVLVKPKGNHNAARSRWVTTGGRTWVLPLMRVVALTVSMLCLTPPGGMGTGLSNLDVWRGGTDSEP-HQDQRSQG--GQQREHVVFVGVPEESAILPLKALAQEMVARGYRASLALPHGFQSWVEDVPGLAFLSLK-SDAATSANASFPDGSTALQPPP--------------GSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFRGSLVGAREFLGHLKAYLGFYHREEAVTYAPLVEALRRDPPVLVIADRRALAAFRACLALDLRCVVNSAGLLGDLDRPPNSIPAPFTGFPMEGQSVGQRIHSILVRLVLALSRVQAAREAD-DLAALRGEPPPPAPVHGVEYRS------------RSSSVLALGNSCFGSLEYPRELPARVHM 1224
            MRTK +R+  G     + + PEVRAGLVLVK K    + R R      RTWVLP++RV+AL  SMLCLTP GGM TG+S +D W  G+  E  H+D+R  G  GQQ+EHVVFVGVPEE+A+LPLKALAQEM+ RGYRASLALPHGFQ+WVED+PGL+FLSLK +  A ++NA+     T    P                 XXXXXXX                                    XXXXXXXXXXX   G RGSLVGAR+F GHLK YLGFY REEAV YAPL+EALRRDPP LVIADRRA AAFRAC  L LRCVVNSAGLLGDLDRPPNSIPAP+TGFP+EGQ++GQR+HS L RLVLALSR+QAAREAD DLA+   + P      G                 RSS+V+ALGNSCFGSLEYPRELPARVHM
Sbjct:    1 MRTKIARKDGGGKHQRREALPEVRAGLVLVKSKDVGRSRRPR------RTWVLPVLRVLALAASMLCLTPTGGMVTGMSKMDAWSAGSGPEQQHEDRRPTGVWGQQQEHVVFVGVPEETAVLPLKALAQEMIGRGYRASLALPHGFQAWVEDIPGLSFLSLKPTGGAPNSNATTHSHGTPATTPQHXXXXXXXXXXXXXXXXXXXXXXHAPSPYVAHPCPARPPPTNGRRRPCSGEGLGDAWGGXXXXXXXXXXXIWRGVRGSLVGARDFFGHLKTYLGFYLREEAVMYAPLLEALRRDPPALVIADRRASAAFRACSRLGLRCVVNSAGLLGDLDRPPNSIPAPYTGFPLEGQTIGQRVHSSLFRLVLALSRMQAAREADHDLASWANDRPVLGSEEGPHXXXXXXXXXXXXXDPRSSTVMALGNSCFGSLEYPRELPARVHM 438          
BLAST of mRNA_M-pyrifera_M_contig7604.17936.1 vs. uniprot
Match: A0A6H5K4N1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4N1_9PHAE)

HSP 1 Score: 326 bits (836), Expect = 6.820e-99
Identity = 247/439 (56.26%), Postives = 284/439 (64.69%), Query Frame = 1
Query:    1 MRTK-ASRQGDGQASP----PEVRAGLVLVKPKGNHNAARSRWVTTGGRTWVLPLMRVVALTVSMLCLTPPGGMGTGLSNLDVWRGGTDSEP-HQDQRSQG--GQQREHVVFVGVPEESAILPLKALAQEMVARGYRASLALPHGFQSWVEDVPGLAFLSLK-SDAATSANASFPDGSTALQPPPGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFRGSLVGAREFLGHLKAYLGFYHREEAVTYAPLVE--ALRRDPPVLVIADRRALAAFRACLALDLRCVVNSAGLLGDLDRPPNSIPAPFTGFPMEGQSVGQRIHSILVRLVLALSRVQA---AREAD-DLAALRGEPPPPAPVHGVEYRS----------------RSSSVLALGNSCFGSLEYPRELPARVHM 1224
            MRTK A + G G+       PEVRAGLVLVK K    + R R      RTWVLP++RV+AL  SMLCL+P GGM TG+S +D W   ++ E  H+D+R  G  G ++EHVVFVGVPEE+A+LPLKALAQEM+ RGYRASLALPHGFQ+WVED+PGL+FLSLK +  A ++NA+          PP         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                   G R    G     G   A+ G                 ALRRDPP LVIADRRA AAFRAC  L LRCVVNSAGLLGDLDRPPNSIPAP+TGFP+EGQ++GQR+HS L RLVLALSR+QA   AREAD DLA+   + P      G  +R                 RSS+V+ALGNSCFGSLEYPRELPARVHM
Sbjct:    1 MRTKIAQKDGGGKQQRRENLPEVRAGLVLVKSKDVGRSRRPR------RTWVLPVLRVLALAASMLCLSPTGGMVTGMSKMDTWSAVSEPEQQHEDRRPTGAWGHRQEHVVFVGVPEENAVLPLKALAQEMIGRGYRASLALPHGFQAWVEDIPGLSFLSLKPTGEAPNSNAT-----AHSHGPPAKTPQHHLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYAPSPHFAHPCPARPPPANGRRRPCSGK----GLGDAWGGGVXXXXXXXXXXXAPGWALRRDPPALVIADRRASAAFRACSRLGLRCVVNSAGLLGDLDRPPNSIPAPYTGFPLEGQTIGQRVHSSLFRLVLALSRMQARSAAREADHDLASWADDRPVLGSEEGPHHRHHQDXXXXXXXXXXHDPRSSTVMALGNSCFGSLEYPRELPARVHM 424          
BLAST of mRNA_M-pyrifera_M_contig7604.17936.1 vs. uniprot
Match: A0A024UVN0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UVN0_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 1.450e-6
Identity = 29/60 (48.33%), Postives = 42/60 (70.00%), Query Frame = 1
Query:  301 HVVFVGVPEESAILPLKALAQEMVARGYRASLALPHGFQSWVEDVPGLAFLSLKSDAATS 480
            +V  V +P    +LPLK LA+E++ RGYR S+A+P   +SWV DVPGL F+SL + + +S
Sbjct:  128 YVSMVSIPVMERVLPLKHLAEELLQRGYRVSVAMPEICRSWVSDVPGLEFISLGTMSVSS 187          
BLAST of mRNA_M-pyrifera_M_contig7604.17936.1 vs. uniprot
Match: W4H5Z0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H5Z0_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 2.000e-6
Identity = 28/53 (52.83%), Postives = 38/53 (71.70%), Query Frame = 1
Query:  301 HVVFVGVPEESAILPLKALAQEMVARGYRASLALPHGFQSWVEDVPGLAFLSL 459
            +V  V +P    +LPLK LA+E++ RGYR S+A+P   +SWV DVPGL F+SL
Sbjct:  137 YVSMVSIPIMERVLPLKHLAEELLHRGYRVSIAMPEICRSWVSDVPGLEFISL 189          
BLAST of mRNA_M-pyrifera_M_contig7604.17936.1 vs. uniprot
Match: W4H8I9_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H8I9_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 2.560e-6
Identity = 28/53 (52.83%), Postives = 38/53 (71.70%), Query Frame = 1
Query:  301 HVVFVGVPEESAILPLKALAQEMVARGYRASLALPHGFQSWVEDVPGLAFLSL 459
            +V  V +P    +LPLK LA+E++ RGYR S+A+P   +SWV DVPGL F+SL
Sbjct:  137 YVSMVSIPIMERVLPLKHLAEELLHRGYRVSIAMPEICRSWVSDVPGLEFISL 189          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7604.17936.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LD57_ECTSI2.390e-12758.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K4N1_9PHAE6.820e-9956.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A024UVN0_9STRA1.450e-648.33Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
W4H5Z0_9STRA2.000e-652.83Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
W4H8I9_9STRA2.560e-652.83Uncharacterized protein n=5 Tax=Aphanomyces astaci... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7604contigM-pyrifera_M_contig7604:869..11386 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score91.7
Seed ortholog evalue8.8e-16
Seed eggNOG ortholog67593.Physo132514
KEGG rclassRC00005,RC00033,RC00049,RC00059,RC00078,RC00171,RC00397,RC00523,RC00529,RC00708,RC02748
KEGG koko:K00699,ko:K04628
KEGG ReactionR01383,R01500,R02358,R02389,R02478,R02502,R02902,R03091,R04322,R04352,R04353,R04354,R04683,R06277,R07106,R08259,R08261,R08262,R08263,R08615,R09426,R09427,R09428,R10804
KEGG Pathwayko00040,ko00053,ko00140,ko00565,ko00600,ko00830,ko00860,ko00980,ko00982,ko00983,ko01100,ko01110,ko05204,map00040,map00053,map00140,map00565,map00600,map00830,map00860,map00980,map00982,map00983,map01100,map01110,map05204
KEGG ModuleM00014,M00067,M00129
Hectar predicted targeting categoryother localisation
EggNOG free text desc.UDP-glucoronosyl and UDP-glucosyl transferase
EggNOG OGs3Q7W2@4776,KOG1192@1,KOG1192@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-11_000540.1
EC2.4.1.17,2.4.1.47
COG Functional cat.CG
CAZyGT1
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01003
Exons6
Model size1224
Cds size1224
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7604.17936.1prot_M-pyrifera_M_contig7604.17936.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig7604 869..11386 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816659.4926696-CDS-M-pyrifera_M_contig7604:868..11521622816659.4926696-CDS-M-pyrifera_M_contig7604:868..1152Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7604 869..1152 +
1692278103.73251-CDS-M-pyrifera_M_contig7604:868..11521692278103.73251-CDS-M-pyrifera_M_contig7604:868..1152Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7604 869..1152 +
1622816659.5079918-CDS-M-pyrifera_M_contig7604:5107..52451622816659.5079918-CDS-M-pyrifera_M_contig7604:5107..5245Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7604 5108..5245 +
1692278103.7447193-CDS-M-pyrifera_M_contig7604:5107..52451692278103.7447193-CDS-M-pyrifera_M_contig7604:5107..5245Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7604 5108..5245 +
1622816659.5205364-CDS-M-pyrifera_M_contig7604:6595..69861622816659.5205364-CDS-M-pyrifera_M_contig7604:6595..6986Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7604 6596..6986 +
1692278103.7548234-CDS-M-pyrifera_M_contig7604:6595..69861692278103.7548234-CDS-M-pyrifera_M_contig7604:6595..6986Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7604 6596..6986 +
1622816659.5310478-CDS-M-pyrifera_M_contig7604:7991..81511622816659.5310478-CDS-M-pyrifera_M_contig7604:7991..8151Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7604 7992..8151 +
1692278103.7644262-CDS-M-pyrifera_M_contig7604:7991..81511692278103.7644262-CDS-M-pyrifera_M_contig7604:7991..8151Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7604 7992..8151 +
1622816659.5413888-CDS-M-pyrifera_M_contig7604:9567..96501622816659.5413888-CDS-M-pyrifera_M_contig7604:9567..9650Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7604 9568..9650 +
1692278103.7742434-CDS-M-pyrifera_M_contig7604:9567..96501692278103.7742434-CDS-M-pyrifera_M_contig7604:9567..9650Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7604 9568..9650 +
1622816659.5520108-CDS-M-pyrifera_M_contig7604:11218..113861622816659.5520108-CDS-M-pyrifera_M_contig7604:11218..11386Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7604 11219..11386 +
1692278103.7840188-CDS-M-pyrifera_M_contig7604:11218..113861692278103.7840188-CDS-M-pyrifera_M_contig7604:11218..11386Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7604 11219..11386 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig7604.17936.1

>prot_M-pyrifera_M_contig7604.17936.1 ID=prot_M-pyrifera_M_contig7604.17936.1|Name=mRNA_M-pyrifera_M_contig7604.17936.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=408bp
MRTKASRQGDGQASPPEVRAGLVLVKPKGNHNAARSRWVTTGGRTWVLPL
MRVVALTVSMLCLTPPGGMGTGLSNLDVWRGGTDSEPHQDQRSQGGQQRE
HVVFVGVPEESAILPLKALAQEMVARGYRASLALPHGFQSWVEDVPGLAF
LSLKSDAATSANASFPDGSTALQPPPGSSTESDPQMPSARPPPPMSPCPA
RPPGVGRPVCSGEGLGDAWGGGVGGGWATGLGVWRGFRGSLVGAREFLGH
LKAYLGFYHREEAVTYAPLVEALRRDPPVLVIADRRALAAFRACLALDLR
CVVNSAGLLGDLDRPPNSIPAPFTGFPMEGQSVGQRIHSILVRLVLALSR
VQAAREADDLAALRGEPPPPAPVHGVEYRSRSSSVLALGNSCFGSLEYPR
ELPARVHM
back to top

mRNA from alignment at M-pyrifera_M_contig7604:869..11386+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig7604.17936.1 ID=mRNA_M-pyrifera_M_contig7604.17936.1|Name=mRNA_M-pyrifera_M_contig7604.17936.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=10518bp|location=Sequence derived from alignment at M-pyrifera_M_contig7604:869..11386+ (Macrocystis pyrifera P11B4 male)
ATGCGCACGAAGGCGAGCCGCCAGGGAGACGGGCAGGCGTCCCCTCCTGA GGTTCGGGCGGGATTGGTCTTGGTCAAGCCGAAGGGAAATCACAATGCAG CTCGATCCCGGTGGGTCACCACTGGGGGCAGAACGTGGGTGCTTCCTCTG ATGCGGGTGGTTGCCTTGACCGTCTCGATGCTCTGCCTCACTCCGCCCGG CGGGATGGGTACGGGGCTGTCCAACTTGGATGTGTGGCGTGGAGGGACTG ATTCCGAGCCGCACCAAGATCAACGGTCCCAAGGGTAAGTTTGCGTGCGG GACCAAGGTGTTTCGTTATTCACGCGACACACAAGATGGAACCCCATTGT TAGACAGCGCCGCCAGTTCGCCTGCTGGTTGGCGGCCTCTTGACTGACCT ATGAAACGACGTAGAGCAGTGATTGTGTGTATAAGATATACCCCTCTGGT ACTCCGTATACTTGGGCAGCAAGCCGTATATACTATTAATAGGCGGTGCA CTCGGGCAGCAACAAAGATGCCCGTACGTGTCATTCCGGCCTTGATTGCC GCGTACCTCCGCTGTGCGCGTGCTTCAGGAATCGCCGCGTACCATAAACC GCGTGAATTTGTAAAGCCTCTTGGGTCTTGATCTCTATATTCACATGTAC TCGTGCAACAGGATATTGCGCCTGTCCGTTTTATTTGCTAAGCTCGTCGC TCGTTGTTGAGCGTTGATTGAAACCACTCTCATTTGGTATTGTGGCAAGC ATACGACTGCAGCTGCTGTTGTTGTGCTCGGGCATGCGTGTATGCACCAG CTGTTCATGATGGCATGGCTGTTGCACTGCCGCTGTTGCTCGCACAGCCG TGGGTACCCCGCAATGTGGGTCTTTACCAACTGCTTTTCCTTTTTTTTTT CGTTTCGCTGAAAATTCCCACCAACGCGAAAAAAATGCGGTGGGTCCTAA TATGGTCTGTTATCATGTTTCATGAGGTTGCGACGCTCGTCCATCTGATC GAATTGTCAAAACCAGCGGCGCACGCGTAGGCCGTCCGCTTAACCGGGCC GTTAGAGGTGCCCCGACTCCTAGAGAGGCGACCGTACCTTGCCGAACCTC GCGAGAGTAGTTTTGATCAACCTCTGGCGCTATAAAGCCCTCCATGACTT GAAAATCGCTGGCGATTTCGTGTTGATCTCGGCTATGTCGGTGAGTCGGC TCTGTGGACTGGACGAATAGAGCTCTCGTGGTCCACGGCGCTTTCTGCGT CCAGCCACGGCCTGAGAATGACCCTGGGGACGACACTGATCTGTCATGTA CAGCAGTGCCGAGTGACTACACGGCTCACACCATACGCCTGCCCGATGTT CTTCGACGACACGACTTTTTTCCGCGATCCGGGAAATTATTTTTCAGGAA TTTTGCAGGGGCTGGCTGAATTTTTCCCGCGAAACGCGAAATAGATCCTT CGATCCGGATTTTTTCCTCGAAACAAGAAAAAAACGTCCAGTTAATAGCG ACCCCAAGGCAGGCATTGATAAGGCAAAGGTAGAGATGCGCCAGGCCCAA TCGGATTGTCTCGATTCAAAAACTCAATATAGCCGGTTTCTTACTGTATA CTCCAACCCGGCCTTATTAACGACTGCGAAACATGAAAACCCTGCGGTGG TAGGGTTCAAAGACGGGCAGAAAGCGCGCGCGAGGACAGTATCACGAGAT ACGCAAGCGCACCCTGCGCGGCCGGTGAAACTGCGAGTTCAACCACAACA CGCCCAGCCCTCCACGATGCACGTGCCATAAGTGCCGCGTGTGCTGTGGG TACCTACATGGTGCATGTCGTGCGCAAGACCCCCCGGGAAGCAGCGAAAT GAAGCCCGTTTTTCACATGATGTTAGACAAGTAGCAGCAGCGGTACCACG AGCGCGCCTACCAGTGCCAGGCGACCTGTATTCAAGCCCGCTGCGTCCAA ACGCAAGCCAGTTGTGCTCAAGCTGGCGTCTCCCAAAACCCCGACTCGCG GGACTGACATACGTGAAAGGCTGTATATTTTCTTTGCAGAAGCCGGTACG GTACAATACAAGTAGAAGAACTACAGCAGTAGCTCAACAGAGAGCTCAAA TGTATGCATTGTGTTTGCATGTTGACATGGTCAATGACATCATATGTGTG GCGGTACTCTAAATGCCGTGCCTCCTCGGGGCACCTGCAGTAAGACAGTA TTGTGCCCAAGCGAATTATCCCACTTTGAATTCGTTTTTTGGTCGGGATA AGACAAAGTAGGAATAAGGCAGCTTCAACTGCCTTGTCCCATGCCTGCAT TATTGCGGGGTACCCACCGCTGTATTGGTATTTACAGCTCAGCTCCGTCC CAGCAGAGGCAGAACTGCCCATTTGGTTTTGTTCATACGCTCGTGCTGTG AACCCAGATTTTGTCTCCGCACCCCGCACCCATTGACGGTGGCACTCGTT ATCGGGTGTATACCAGTACTAAGATGCAAGGCGTATGATAGCAAGGCTCA CGAGTGATGTACTCTTGTGCCACAGGTATCACGCACGATCGTACTGCGGC AGTACACGAGCAGCAGCACTCGTACAGCAGCGGTATATCATACAGCAGGC GCAAAATAATAGCACCTACGCCCCGACCAACTACTGCTGTTGTACCGATG TACCTGGTACCTGGTGTATAGTTGAGAAGGATTAGGGTTGAGAGGCGCAT CTCTGTCGCTCATCGTGTCCATCCACAGCGTTAACGTTGCTATAAGGATT TAATATTCATCAATGGCATTGCTTTTTTCATCACTAGTCCTCCTTACGTA GCTGTCGGGATTGTGAACTGTGCTTGTTAGAGCAGTACTGCCGCTGTGTC TGTACACCAAGATGCCCCCTCAGGTTGCCGGCAGATTGCACTGACAGTTG ACAATACTACTATTACGGGGGACCATAGTAAATAGGACCAAATATTGTAA GTAAAAATGGGTAATAATATAGGTTTTTATTTATACAATAGNNNNNNNNN NGGACCAGAGTAAATAGCACCAAAAATAAAAAAAAAAAATAGGTAATTAT ATAGGTTTTTATGTATACCATAGGTACTATCAACTATGGACCCCCGTAAG AGACTACCACTACGTAGAGAAACAACAATGTAACGCCCTTTGTGACTGCC CTTTCGTTTTGGAGACGCGTTACGTGGAAATTGTAGCGGTTGCATCACGA ATACTGTAGTCGGTTTGCAAAAGGACGAAATGCCTGGCCCAGCAACTGCC GACCAGCTACTGCTATGTTGTTCGCATGTTGCACGAGTCTGTCAGCAGCG TCCCGTGCTGTACCCGCTAGGTAGTGCCACTCGTCCCGATATTCCAAGCA TTGCCACTTGCCTCCATCAAGGTCAAATCATTTATTAGCAATTCTTCACT CCCTTAATGTGAACCGAAACGCCTACTTAATGGTCTCCATCTTGAAGCTG GAGGTAGTGGCGCTGCTGCTTTGCTTGTGGAACTGCTGTTGTCTTGACAC CGTAATCCCTCCCCGACCTCATCCCACCCGAACGTGAGCCCCCCGAACAA GCAGTAGAGCGTACCACTTCTTCGGGGACCCAAATAGCATGTATTGATGT TCCCTAGGTCAAGTGTTACGGGAGGGCATTGTATCCAGAACCCACGGTGG ACCCCAAGAACACACTATTCCCCTTTGGTTACCAACCATATTTCGTTTTG ATTACTCCCTGGTACATATTGTGTTCCTCCGTTATGCATAGTGATGTTTG ATCGGGTTGGCGTTAGGGTTGGTTTGCTTTGCTTCGTACGCAGGTTCCGT CAACCATAGTGCCGAATGGCTGGTAAGCCGCCCAGTAGAGCTTGCCAGTT ATTGAGAGACCTAAATACTGGAGTTTCATCGGGCATGTGTAACGGTGTCT GGTTGGGTTACTGTTATTATATGTACTCTAAGTGTTGAGGTGTACGGTTT GTTCGTTTTTGGTCAGAAAGTCCAGGTAGAAAATCCGTCGACCAATCCTC ATAGTGTCGAACAAGCGGTAAACTACGCTCCGAACTGAACTGCTGTCGAC CGAATAAGCGCTACCCTTCGCTCCAAACTGAACTGCTGCCAACCGAATAG GCCGTAAACTACGCTCCATACTGAACTGCTGCCGATCGAATATGCAGTAA TCTAGGCTCCAAAATGATTGCTGCCGACCGCTTCTGCTCCGGTCCTTGCA CACTACGCCTCGTTTGAATTGACTTATTGGCTGCCACAGGGGCCAGCAGC GGGAGCACGTGGTCTTCGTCGGCGTGCCGGAGGAGAGCGCGATCCTGCCT TTGAAGGCGCTGGCGCAGGAGATGGTAGCGCGGGGGTATCGGGCGAGCCT CGCTTTGCCTCACGGCTTCCAGAGTTGGTGAGCATTTATCCCTTGTCTTT CTCGGTGTAATCCCGAACATGTATGCAGACCCGGGCTCGGAACATGTGGG CAGAGGTCGAGACCAAAAGTGGACGGGAGTCGGGGCAGGGGCAGGGGCAG GGGCAGGGGACAGACAGGGATCTCGACAAGGGCCGGAACAGGGGTCAGGA AAGGGATAATAGGGACAGGGACAGCTGTCCGGACAATGGCACGGGTTGCG ACGTGGGCAGGGGTCCGGACAGAGGTAGGGGTAGGGATATAAGGGCAGGG GTCGGGATGTTTGCAGATGTCGAGAAATGGACAGACGTCGAGACAGAAGC TGGGGGTCGGGATAAGGTTCGTGACAAGAGCCGAAGCAGGGGTCCGTGTA GGGACAGTTATCGGGACAGGGATAGGGGTTGTGGCATGGACTGGGGTCGG GACAAAAACCAGGACATGTACAGAGATTGGGACACAGACGGGGTCGGGAA AGGAGTCGGGGCATGGACAAGTGTCGAGACAGGATTCTGGATAGGCGTTG CGACAAGGGCTGGAACAGGGGCCGGGATAGAGAGAAGGAAAATTGTCGGG AAAATGACAGTGGTTGCGACATGGACAGGGGTCGAGACAGGGATATATAT AAGGATAGGGACATGAGTCGGGACCTATCCCGAGATGGAAGCACGGGTAG GCTCGGGACAAGGGTCGAGATGTGGACAGGTGTCGGGACGGGGTCGCGAC AAGGGCCGGCACAGAGGTCGGGATAGGGGCAATGGCAATTATCGGGACGT TGACGGGTTACGACGTGGACAGGGGTCGGGACAGAGGTAGGGACAGGAGT CGGGACATGTTCAGAGATCGAGGCATGGACAGGGCCGGGAAGGGGGCAGG GGTCAGGACAAGGGGTTGGGAAAGGGGTCAGGACGTCAGGACAAGGATCA GGATAGACATGGAAGAAAAGGAACTGGGTTGGAACAGAGACAGAGGTCGA TATATGCGACAGGGAAGGGGTCGGCAAATATGCCGGGATAGAGGTCGAGA TAGGGATCCGGACGGGGACATGGGTTGGAACGTAAGTTCATTATTTAGCC CACTTGCTGCATGATTTCACGCGTTCGTTCGTTAGCTCCATGGTTTCGTT TGTTTGTTCGTTTCATGATCTCGTTCTTTCATCGGTCAGTTCGTCCCAGC CCTCCCTCATTGCAGTCGAAACGAGGTGTCATTTCGTTTTTTTTGTTAGT TCTTGCGCCAACCTCCTCCCTCCTGGTGCTGCGCTCATTTCCTCCCTTCT GCTGCTGCTGCTGTTGCGCTCATCATCCCCGCTGCTGGTGCCACCTTTTT CTGAACGTCGCCTTCCCATCTCATCAGGGTGGAGGACGTTCCCGGCCTAG CTTTCCTCTCTCTTAAGAGCGACGCCGCGACTTCTGCTAACGCTAGCTTC CCCGACGGGTCAACGGCGTTACAGCCGCCGCCTGGTTCTTCAACCGAAAG CGATCCGCAAATGCCCTCTGCCCGCCCCCCGCCCCCCATGTCCCCGTGTC CCGCCCGCCCTCCCGGCGTTGGGAGACCCGTGTGCTCGGGGGAAGGGTTG GGGGACGCTTGGGGAGGAGGTGTGGGCGGAGGGTGGGCGACAGGCCTGGG CGTGTGGAGGGGGTTTAGAGGGAGCCTGGTGGGAGCGAGGGAGTTCTTGG GACACTTGAAGGCGTACCTAGGGTTTTATCATCGGGAGGAAGCGGTTACG TACGCTCCTCTCGTGGAGGTGAGAGAACGATGCCACTAGTAGTCAAGGAC GCGTCAAGGCCTATGTTGACGGTTTTCTTTTGGCTTTAGTGTGGGGTCTG TCAGCCAAGGGATCAAATCGCGGTCTCCTAGAATCTTTATTCAATAGTGC GCTCACGTCGTAGGCGTAAACTACTTAGGGAAGTAGAGTGAGGTCATGTT CGCAGTCCGCAGTAGAAGGGTCAATAAGCACTGCACGTATTACGGAGGAC AATAGTACCAGGTAAATAACACCTACGGTACACACAAAAACCTGTATATT TCCCTATTTTTACTAACAAAGTTTTCGTCCCATTTACTATGGTCCTCCGT AATAGTACTATTTGAGGTTTAGCGGACTCATGGCTGGCTGTATGCCCCCG CTTGGCATCGCATTGTCTGCTCTGCTCAATGTAATGCAGGACAATGTAGT ATCTCGGAGTCGTAGTTTTGTGACCACAGAGACAGCTTGTAACTCTCTAG GATTGAAGAATCGGCAGGGACGCTGGTTGTGCTGGATGTCGACGCGTTGA AAGAACGGTTTCGTGTCAAGAATACACACACCTCGTCGCTCGCAATCGGC GTGGTCGTGCTGCTGCGTCGTCTGTACCTCATCGCTCACAATCAGCGTGC GCGTGCTGCGTTATCTGTGCCCCATCGCTGGCAATCAGCGTGCTCGTGCT GCACCCGTACCTCGTCGCTTGCAGTCAGGTTCTCGTGTTCCGTGGTCTTG AAGACGCGAGCTCGGCGACGACGATTGTTTCTGAAGTCCCCTTATCCATT CTCACTTCCTCCATTCCCCCTGCCCCCCGCCCCCCCTCCCTCCCTTCGCC GCCGCCACCGCCGCCAACACTACACGGACGGCCTATATTTACGTATGTAC GCCCACGCGTGATTCTGTCGGTGTTGTCGGTGTTGTTGTTGGTGTTGGTG TGCTTGTTGATGTTTTTGGTGTAAATTGTTGCGCTTGCCATTTTTTTTTT TTTGTCTTTTGATGGTGCCAAAGGCCCTTCGGCGCGACCCGCCTGTTTTA GTCATCGCGGACCGGCGAGCGCTGGCCGCCTTCCGCGCGTGCCTCGCGCT AGACTTGCGTTGCGTCGTGAACAGCGCAGGGCTGCTGGGGGACCTCGACA GACCGCCAAACTCCATCCCTGCTCCTTTCACCGGTGAGCGAGAAAAGCGG CAAGCTTAACTCCTTCGGGACCGGTTTGGTAGCGACCAAAGCAATGGTAC CTTCGGTGTTTTCGACCATCTACGAGTGTAGCGGCAGCGCACAGCAGTAC GAGTTGGACCATGTTGCGCCATGCCATACGACCCCTTGCAATGCAACTCA GAGACCAATGTGTGTCACACCCCAATGAAAAAACGTCAATCAAGCAGTGC CCGTTGCTGTATTCGTCACTTCTTGCCGCCAGTGACTTCACGTCTTGAAG TTCCCAAGAGTCTTGAGCTCAACCATTTCACTGCTGCAAGTTTCCCCCCC CCACTAACACACTACAGTAGTTCCAAGTAGGTTGGCCCCAAATACGGGGG TGCACTCCTGGAAGAGTTTATTGACTCGCTTGGGACTTGAAGGGGAGGAC AAAGTGCCGAAAATAGAAGAAAAATGGTAAATGATGAATGGCGATTGCAT CTTCGGCCGTATAACCCTCACCCAGGAGCTGCTGGGGTAGGCGAGGCGAC CGAAGTGCGGGCAGCATACGGTGGGGAGATTAGATGCACGACACGCGTGT GTTATTAGGGGGGTCCATAGTTAACAGGACCTATGGTGTACATAAAAACC TATATATTTGCCTATTTTTACTAACAAAATTTGGTCCCGTTAACTATGGA CCCCTGTAGTAGTAGCATGGTGATGTTGTCCTGCTGAACGCTCTTCCTAC TGCAGGTTGATGAGGCGGCTTGCTTTTGTTTTTGTGGATTTTTTTATGCT GCAATCAAGCCTTAAGAGCCACTGCCCTCTACCGTTTGGGGGGTATTTTG TATTCTCCGAAGTACCTGAATTAGCGTTGGATTTTTTTTGCACTACGGCG GCAGTAGGAAAAGAGTTAACCCTACCCCCCAGCCCCCTGTCATTCGACGC TGTCATCCATATGCAAGAAGTACGCACAAGATGCCGAAGTCCGCCTCACA AGCGATTTTTGGCAAGTCACCCTTCATGCGACTCGCCGAGTACCTCGCGG CGCTTCGCGCTTGGTGCAAGCAATGTCTGCCTGGGCGGTGAATACCAGAC GTGCTCCGTCCCCGCGTTGTAGGGATGCGAGGGTCTCTATGTATGGTCAT ATGGTCATACGACTACGGGAATGCATGACAATGAATAACCCCCTCTCGCA TACTTAGATTTATTGTTGGAGCGGTTTGGTACTACCGATGGGAGAATGTT ACCATCTATCGCCACCGAGATCAGCAATCGATCGGACTCACACCTAAAGT CGTTATTTCTAACCCTACCCCCCCACCCCCCGTGGTTCGTCTCGAAAGGC ACGCGTGATCAATGGTCAAATATGTCTAAGGCAAGCAACAAATGAGTACG CCCCCCCCCGCCCCCCCCCCCGCGCGCGCGCCTGCCCCGCTATGGCCAGG CTTCCCCATGGAGGGACAATCGGTTGGACAGCGGATACACAGCATCTTGG TTCGCCTGGTTCTGGCCTTATCGCGGGTACAGGTGAGGGGGGGCGGACGG TTACCGTTCGTCTCGTGGAGCTGCGGCATGCGATTGATGCTCCGAAGTTC CGGCGTGTTAGTGATGCAGTGTGGTGTTGCGTGCGTGCGTTGTGTGGTGT TATGCGAATTTTTATGTCTTGTACACGATATTATTGAAGTAGTTTGAAGA CCTTAGTTCAATTATTTTACATGTATTATCTACGAGTGGGACGATACACA TACTGTAGCACCAATGATGGTATCGTTCCATACATACGTATGAGTTGTAG AATTATTACATACCAGGTATTAATCGTACCAGGTATCAATTGGGCTTGTT AGTTGGCTTGACTTCGCGACTAATTGGACTAGTTAGATAAGCTGGATGTC GAACGTACGCCAACTAACAAGCTGACTTAGTCTCTTATCAACATAAGACA CATGCCGAGCCATGAACGCGTCAGTCAGATGCAAAGACGAAAAACTCCAC AAAGTTCCACAGAATTACCGCACGCAACTGACCGCAACACCCAGCCAACT AATGCCAACTATTGCCAACTACGGTCGGCGACTTGTGGTCAACCAGCTCT CAGCCTTAGTGCTAGCTTTAGTGGGTTGAACCTTAAACCATCATGGAGTC GCTTAAAGGGGGCTACCTGTGTTTCATTCGATGTTTCGGTACAAACATGA TGGGTTACGCCTTTAGAAGGTGTACTGAGGACATTTCTGCGCCATTTTCC GGTATACCGGTAAGAGATTTCCGCCGCTTTTCGCCTTGTGGCAACGTTGA TCGAGGACTGCGCCTGTGTCGTCTACCTGGTATACGGTACTCCTGACTTT ACTTGGTAGCCGGTACTGCTACATAGCATCTCATCGGAGTCTTCCACCCC ATCGCGAGTCAATCCCAACTCGTGCTTCGACAGAGGTACAAGTATGGACC CCCGTAATGATGACTCACTAATACTATAGAGCTACTCAAGCGAAGAGCCT CAGAAGGCAAAAATAGGTGCACATCTACCGCAGCATGCGTCCCTTACCTC ACCTCACCCGATCGAGAGTCATTCCCAACCTGAAATAAAAACTCGAGTAC GCGACAGAGAGCACCTGAGAAACCGGGAATGGATACGTTTTGTCTCCGGT GTTTTTTCGCGAGTAAGAATAAGATGACCCTGTTTTTTTACCGAAATTTC TGTGGGGTATACCTGCCTCACGCTAGAATTCGAGCCTGGCCTGACCTGAC CCAAACTTTGTTTCTCTGAAGTGGTGTCGCGTGCTGCACTCCTTCCCTAT GTATGAATAATACCAATCTGGACGTGAATATAGTCTACGTTTGAAGGCTG ATGTTAATACCAAATGACTACTATATTCCCGGCCAGAGTGATCTAGAATA ATGGCAACATATTTGTTGTCGGCTAATGGAGTATTGGAATCCTGTACGTA GCCTTTACGCCACTCCGCATGGAAGAGAGCCTTTTTAGGCGCCGCAGCAG TGGGAGAGGCAAAAAAATAAAACGGCGTTGCGCTTCGCGTTCGGCGTCTT GCCTCATCACAAGAAAACACTGCATGCTTTCCGTGCTTGTTTCGACACAG GCGGCTCGAGAAGCGGATGACTTGGCGGCGTTGAGGGGTGAACCCCCGCC CCCGGCCCCCGTCCACGGTGTGGAGTACCGCTCGCGCTCGTCGTCGGTGT TGGCTCTGGGCAATAGCTGCTTCGGGAGCCTTGAGTACCCTCGAGAGCTT CCGGCGAGGGTCCATATG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig7604:869..11386+

>mRNA_M-pyrifera_M_contig7604.17936.1 ID=mRNA_M-pyrifera_M_contig7604.17936.1|Name=mRNA_M-pyrifera_M_contig7604.17936.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2448bp|location=Sequence derived from alignment at M-pyrifera_M_contig7604:869..11386+ (Macrocystis pyrifera P11B4 male)
ATGCGCACGAAGGCGAGCCGCCAGGGAGACGGGCAGGCGTCCCCTCCTGA
GGTTCGGGCGGGATTGGTCTTGGTCAAGCCGAAGGGAAATCACAATGCAG
CTCGATCCCGGTGGGTCACCACTGGGGGCAGAACGTGGGTGCTTCCTCTG
ATGCGGGTGGTTGCCTTGACCGTCTCGATGCTCTGCCTCACTCCGCCCGG
CGGGATGGGTACGGGGCTGTCCAACTTGGATGTGTGGCGTGGAGGGACTG
ATTCCGAGCCGCACCAAGATCAACGGTCCCAAGGATGCGCACGAAGGCGA
GCCGCCAGGGAGACGGGCAGGCGTCCCCTCCTGAGGTTCGGGCGGGATTG
GTCTTGGTCAAGCCGAAGGGAAATCACAATGCAGCTCGATCCCGGTGGGT
CACCACTGGGGGCAGAACGTGGGTGCTTCCTCTGATGCGGGTGGTTGCCT
TGACCGTCTCGATGCTCTGCCTCACTCCGCCCGGCGGGATGGGTACGGGG
CTGTCCAACTTGGATGTGTGGCGTGGAGGGACTGATTCCGAGCCGCACCA
AGATCAACGGTCCCAAGGGGGCCAGCAGCGGGAGCACGTGGTCTTCGTCG
GCGTGCCGGAGGAGAGCGCGATCCTGCCTTTGAAGGCGCTGGCGCAGGAG
ATGGTAGCGCGGGGGTATCGGGCGAGCCTCGCTTTGCCTCACGGCTTCCA
GAGTTGGGGCCAGCAGCGGGAGCACGTGGTCTTCGTCGGCGTGCCGGAGG
AGAGCGCGATCCTGCCTTTGAAGGCGCTGGCGCAGGAGATGGTAGCGCGG
GGGTATCGGGCGAGCCTCGCTTTGCCTCACGGCTTCCAGAGTTGGGTGGA
GGACGTTCCCGGCCTAGCTTTCCTCTCTCTTAAGAGCGACGCCGCGACTT
CTGCTAACGCTAGCTTCCCCGACGGGTCAACGGCGTTACAGCCGCCGCCT
GGTTCTTCAACCGAAAGCGATCCGCAAATGCCCTCTGCCCGCCCCCCGCC
CCCCATGTCCCCGTGTCCCGCCCGCCCTCCCGGCGTTGGGAGACCCGTGT
GCTCGGGGGAAGGGTTGGGGGACGCTTGGGGAGGAGGTGTGGGCGGAGGG
TGGGCGACAGGCCTGGGCGTGTGGAGGGGGTTTAGAGGGAGCCTGGTGGG
AGCGAGGGAGTTCTTGGGACACTTGAAGGCGTACCTAGGGTTTTATCATC
GGGAGGAAGCGGTTACGTACGCTCCTCTCGTGGAGGGTGGAGGACGTTCC
CGGCCTAGCTTTCCTCTCTCTTAAGAGCGACGCCGCGACTTCTGCTAACG
CTAGCTTCCCCGACGGGTCAACGGCGTTACAGCCGCCGCCTGGTTCTTCA
ACCGAAAGCGATCCGCAAATGCCCTCTGCCCGCCCCCCGCCCCCCATGTC
CCCGTGTCCCGCCCGCCCTCCCGGCGTTGGGAGACCCGTGTGCTCGGGGG
AAGGGTTGGGGGACGCTTGGGGAGGAGGTGTGGGCGGAGGGTGGGCGACA
GGCCTGGGCGTGTGGAGGGGGTTTAGAGGGAGCCTGGTGGGAGCGAGGGA
GTTCTTGGGACACTTGAAGGCGTACCTAGGGTTTTATCATCGGGAGGAAG
CGGTTACGTACGCTCCTCTCGTGGAGGCCCTTCGGCGCGACCCGCCTGTT
TTAGTCATCGCGGACCGGCGAGCGCTGGCCGCCTTCCGCGCGTGCCTCGC
GCTAGACTTGCGTTGCGTCGTGAACAGCGCAGGGCTGCTGGGGGACCTCG
ACAGACCGCCAAACTCCATCCCTGCTCCTTTCACCGGCCCTTCGGCGCGA
CCCGCCTGTTTTAGTCATCGCGGACCGGCGAGCGCTGGCCGCCTTCCGCG
CGTGCCTCGCGCTAGACTTGCGTTGCGTCGTGAACAGCGCAGGGCTGCTG
GGGGACCTCGACAGACCGCCAAACTCCATCCCTGCTCCTTTCACCGGCTT
CCCCATGGAGGGACAATCGGTTGGACAGCGGATACACAGCATCTTGGTTC
GCCTGGTTCTGGCCTTATCGCGGGTACAGGCTTCCCCATGGAGGGACAAT
CGGTTGGACAGCGGATACACAGCATCTTGGTTCGCCTGGTTCTGGCCTTA
TCGCGGGTACAGGCGGCTCGAGAAGCGGATGACTTGGCGGCGTTGAGGGG
TGAACCCCCGCCCCCGGCCCCCGTCCACGGTGTGGAGTACCGCTCGCGCT
CGTCGTCGGTGTTGGCTCTGGGCAATAGCTGCTTCGGGAGCCTTGAGTAC
CCTCGAGAGCTTCCGGCGAGGGTCCATATGGCGGCTCGAGAAGCGGATGA
CTTGGCGGCGTTGAGGGGTGAACCCCCGCCCCCGGCCCCCGTCCACGGTG
TGGAGTACCGCTCGCGCTCGTCGTCGGTGTTGGCTCTGGGCAATAGCTGC
TTCGGGAGCCTTGAGTACCCTCGAGAGCTTCCGGCGAGGGTCCATATG
back to top