prot_M-pyrifera_M_contig76012.17929.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig76012.17929.1
Unique Nameprot_M-pyrifera_M_contig76012.17929.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length176
Homology
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BLAST of mRNA_M-pyrifera_M_contig76012.17929.1 vs. uniprot
Match: A0A0S8DZM1_9BACT (Glyco_transf_64 domain-containing protein n=1 Tax=Phycisphaerae bacterium SG8_4 TaxID=1703409 RepID=A0A0S8DZM1_9BACT)

HSP 1 Score: 66.2 bits (160), Expect = 4.130e-10
Identity = 49/172 (28.49%), Postives = 86/172 (50.00%), Query Frame = 0 
Query:    1 MSFKRPQEVEKIVKHYAGLDMVGELIVFNNNLLETDLTPLAESIPKLLVLQTANDLGVHTRFSAGTLATHEAILFQDDDVLLSAEAIHKLLSEFHRHPLSIHGIWGRWPTRSNPYRPGEIPPDFTRAPIVLTRAFVVNKAHMGTFWVAAPHLDFLAASATPRWNGEDILFSL 172
            +S++RP  +E IV+      ++ E++V+NNN    ++    +     +V+ ++++     R+    L  H  I FQDDD+L+S E + K++S +   P  I+G  GR   R   Y P  +   +    I+L ++ + +K     F+  AP  + LA    P   G+DI FSL
Sbjct:    8 LSWRRPTNIEPIVRTLRKHPLIKEVLVWNNN---PEINLKGDGA---IVINSSHNFFPFVRYCLVPLTKHPLIWFQDDDLLISPEQLDKIVSAYSTAPNRIYGCRGRNIVRGR-YAPAIV---YGECDIILGQSMLFHKK---LFYEVAPEFNALA----PNERGDDIAFSL 162
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BLAST of mRNA_M-pyrifera_M_contig76012.17929.1 vs. uniprot
Match: A0A525KGT8_BRASZ (Uncharacterized protein (Fragment) n=1 Tax=Bradyrhizobium sp. TaxID=376 RepID=A0A525KGT8_BRASZ)

HSP 1 Score: 54.3 bits (129), Expect = 1.510e-6
Identity = 30/103 (29.13%), Postives = 56/103 (54.37%), Query Frame = 0 
Query:    1 MSFKRPQEVEKIVKHYAGLDMVGELIVFNNNLLETDLTPLAESIPKLLVLQTANDLGVHTRFSAGTLATHEAILFQDDDVLLSAEAIHKLLSEFHRHPLSIHG 103
            +S++RP+ + +IV        +GE++V+NNN  + +LT     +P   ++ +  + G   R+    LA ++ I FQDDD+L+S     KL + + +    I+G
Sbjct:    6 LSWRRPENIARIVAELRTWKRIGEIMVWNNNP-DQNLT-----LPGATIINSGRNFGCLARYGLVALADNDTIWFQDDDLLVSEAQFEKLFASYLKDAGRIYG 102
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76012.17929.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A0S8DZM1_9BACT4.130e-1028.49Glyco_transf_64 domain-containing protein n=1 Tax=... [more]
A0A525KGT8_BRASZ1.510e-629.13Uncharacterized protein (Fragment) n=1 Tax=Bradyrh... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015338Glycosyl transferase 64 domainPFAMPF09258Glyco_transf_64coord: 4..172
e-value: 5.6E-8
score: 32.4
IPR029044Nucleotide-diphospho-sugar transferasesGENE3D3.90.550.10coord: 1..175
e-value: 3.6E-14
score: 54.1
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILY53448Nucleotide-diphospho-sugar transferasescoord: 3..118

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig76012contigM-pyrifera_M_contig76012:149..676 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig76012.17929.1mRNA_M-pyrifera_M_contig76012.17929.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig76012 149..694 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig76012.17929.1 ID=prot_M-pyrifera_M_contig76012.17929.1|Name=mRNA_M-pyrifera_M_contig76012.17929.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=176bp
MSFKRPQEVEKIVKHYAGLDMVGELIVFNNNLLETDLTPLAESIPKLLVL
QTANDLGVHTRFSAGTLATHEAILFQDDDVLLSAEAIHKLLSEFHRHPLS
IHGIWGRWPTRSNPYRPGEIPPDFTRAPIVLTRAFVVNKAHMGTFWVAAP
HLDFLAASATPRWNGEDILFSLSICA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015338GT64
IPR029044Nucleotide-diphossugar_trans