|
Homology
BLAST of mRNA_M-pyrifera_M_contig7595.17918.1 vs. uniprot
Match: D7FRD4_ECTSI (Retinitis pigmentosa 2 (X-linked recessive) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRD4_ECTSI) HSP 1 Score: 385 bits (990), Expect = 1.050e-128 Identity = 245/398 (61.56%), Postives = 276/398 (69.35%), Query Frame = 1
Query: 1 KVLIKEPGSIGGQQFIVEECSGSEVYLLDHTAALTIDVCVDCRIFAGPCESSVFIRDCKDCTIVVACQQFRTRDCSGCTFFLFSATQPVIESSVDLRFACYTLDYFSLAGQFAAANLSVWNNKWSQIFNFTGG-EGDWSCLPPGSHHSRDFATNCLPEAARQRVGYTDRTNGAVVPLTAGVRGLTPSEETCFVVVMPKHVDAVLGKLLASGXXXXXXXXXXXXXXXXXXXXXXXDGAAKEVTPRLVRTKLFRPQLAQSKPFFAGSPDALIALAASSAVLGMQWAGRGSKTAAMELLVASGAAATNPAVAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXDNDNSNDASAEVMCGESSENTVPPK-EGGGQGKGRGNSKASATKAKIFFEQWGEDKGTSL 1188
+V+++EPGSIGGQQFIVEECS EVYLLDHTAALTID+C GPC T+VVACQQFR RD TFFLFSATQPVIESSV LRF CYTLDYFSLAGQFAAA LSVWNN+WSQI NFTGG +GDWSCLP GSHH RDF T LPEA+RQRVGYT+ T+GAVVP+TAG+RG T +EETCF+VVMP H+DAVLGKLLA G D T RL+RTKLFRPQ+AQSK FF+G+P ++ LA+S VLGMQWAG GS AA+ LL A+G XXXXXXXXXXXXXXXXXXXXXXXXXX N A G S V + +GGG GR S++SA KA++FFEQW EDKGT L
Sbjct: 52 EVIVREPGSIGGQQFIVEECSECEVYLLDHTAALTIDLCXXXXXXXGPCXXXXXXXXXXXXTVVVACQQFRARDXXXXTFFLFSATQPVIESSVGLRFGCYTLDYFSLAGQFAAAKLSVWNNRWSQIHNFTGGGDGDWSCLPEGSHH-RDFTTRSLPEASRQRVGYTENTHGAVVPITAGMRGFTEAEETCFIVVMPGHIDAVLGKLLAVGGGG--------------------DSPISATTSRLLRTKLFRPQMAQSKTFFSGAPSSMAELASSFPVLGMQWAGPGSAEAAVSLLAAAG------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSADIGAGNGTSEYYMVAGRGDGGGNDDGRSGSESSAAKARVFFEQWDEDKGTPL 416
BLAST of mRNA_M-pyrifera_M_contig7595.17918.1 vs. uniprot
Match: G4ZD48_PHYSP (Protein XRP2 n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZD48_PHYSP) HSP 1 Score: 192 bits (487), Expect = 8.190e-54 Identity = 96/202 (47.52%), Postives = 125/202 (61.88%), Query Frame = 1
Query: 7 LIKEPGSIGGQQFIVEECSGSEVYLLDHTAALTIDVCVDCRIFAGPCESSVFIRDCKDCTIVVACQQFRTRDCSGCTFFLFSATQPVIESSVDLRFACYTLDYFSLAGQFAAANLSVWNNKWSQIFNFTGGEGDWSCLPPGSHHS----------RDFATNC--LPEAARQRVGYTDRTNGAVVPLTAGVRGLTPSEETCFV 576
L K PGSI GQQF++E+C +++LLDH ++ ID CV+CRI GPCESSVF+RDCK CT+V A QQFRTRDC +L+SAT+P+IE+S LRFAC+ L YFSL QF A S WNNKWS+IF+FT G W+ LP H S + A + +P + +G + VVP+T+G+ T FV
Sbjct: 63 LAKLPGSINGQQFLIEDCHNCDIFLLDHCTSVQIDACVNCRIVVGPCESSVFLRDCKKCTVVCAAQQFRTRDCEDLDVYLYSATEPIIETSSRLRFACFPLTYFSLQQQFRQAKFSAWNNKWSEIFDFTPDHGGWTPLPMHPHESPLAEMMPEKENNGARSLWKMPSWTAEELGLSVDLPQLVVPITSGLCARKEDAPTVFV 264
BLAST of mRNA_M-pyrifera_M_contig7595.17918.1 vs. uniprot
Match: A0A8K1FEW1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FEW1_PYTOL) HSP 1 Score: 191 bits (485), Expect = 1.250e-53 Identity = 91/207 (43.96%), Postives = 128/207 (61.84%), Query Frame = 1
Query: 7 LIKEPGSIGGQQFIVEECSGSEVYLLDHTAALTIDVCVDCRIFAGPCESSVFIRDCKDCTIVVACQQFRTRDCSGCTFFLFSATQPVIESSVDLRFACYTLDYFSLAGQFAAANLSVWNNKWSQIFNFTGGEGDWSCLPPGSHHS---RDFATNCL---PEAARQRVGYTDRTNGAVVPLTAGVRGLTPSEETCFVVVMPKHVDAVL 609
L+K PGS+ GQQF++E C ++++LDH ++ ID CV+CRI GPC +S+F+R+C+DCT+V A QQFRTRDC +L+SAT+P+IE+S +RFAC+ L YF+L QF AA SVWNN+WS+I+NFT G W + +H S +T L P + VG T VVPLT GV + V+ + H ++
Sbjct: 48 LVKLPGSVNGQQFLIEACRDCDIFVLDHCTSVQIDDCVNCRIVIGPCNASLFLRNCRDCTLVCAVQQFRTRDCEKIDVYLYSATEPIIETSSQMRFACFPLAYFNLQQQFDAAKFSVWNNRWSEIYNFTPEHGAWKAISTQTHISPLAEAMSTPTLWGLPTQTAEEVGLTVEAAKLVVPLTGGVSARREDDNLAIVIFVQAHAHLMM 254
BLAST of mRNA_M-pyrifera_M_contig7595.17918.1 vs. uniprot
Match: A0A2D4BH13_PYTIN (XRP2-like protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BH13_PYTIN) HSP 1 Score: 190 bits (483), Expect = 2.950e-53 Identity = 91/192 (47.40%), Postives = 122/192 (63.54%), Query Frame = 1
Query: 7 LIKEPGSIGGQQFIVEECSGSEVYLLDHTAALTIDVCVDCRIFAGPCESSVFIRDCKDCTIVVACQQFRTRDCSGCTFFLFSATQPVIESSVDLRFACYTLDYFSLAGQFAAANLSVWNNKWSQIFNFTGGEGDWSCLPPGSHHS------RDFATNC--------LPEAARQRVGYTDRTNGAVVPLTAGV 540
L K PGSI GQQF++E CS ++++LDH A+ ID CV+CRI GPCESS+F+R+CK CTIV A QQFRTRDC +L+S+T+P+IESS +RFACY + YFSL QF A SVWNN+WS+++NFT G W L H S + C +P + Q +G + + VVPL++G+
Sbjct: 55 LAKLPGSINGQQFLIENCSECDIFVLDHCTAVQIDDCVNCRIVIGPCESSLFLRNCKQCTIVCAVQQFRTRDCEDIDVYLYSSTEPIIESSTRMRFACYPMTYFSLQHQFDQAKFSVWNNRWSEVYNFTPDHGSWKALSTSCHESPLTVCVSASSQGCDDGLALWKMPSWSAQELGLSINVDQLVVPLSSGM 246
BLAST of mRNA_M-pyrifera_M_contig7595.17918.1 vs. uniprot
Match: K3XBN6_GLOUD (C-CAP/cofactor C-like domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XBN6_GLOUD) HSP 1 Score: 185 bits (469), Expect = 1.910e-52 Identity = 92/189 (48.68%), Postives = 120/189 (63.49%), Query Frame = 1
Query: 4 VLIKEPGSIGGQQFIVEECSGSEVYLLDHTAALTIDVCVDCRIFAGPCESSVFIRDCKDCTIVVACQQFRTRDCSGCTFFLFSATQPVIESSVDLRFACYTLDYFSLAGQFAAANLSVWNNKWSQIFNFTGGEGDW---------SCLPPGSHHSRDFATNC--LPEAARQRVGYTDRTNGAVVPLTAG 537
+L K PGSI GQQFI+E C G +++LLD+ ++ ID C+DCRI GPC++S+F+R+CK CTIV A QQFRTRDC +L S T+P+IE+S LRFAC+ L YFSL QF AN SVWNNKWS+I+NFT G W S L P D A + LP + +G + + +VPL+ G
Sbjct: 50 LLTKLPGSINGQQFIIEGCRGCDIFLLDNCTSVQIDECIDCRIVVGPCQASLFLRNCKKCTIVCAVQQFRTRDCEDVDVYLHSVTEPIIETSARLRFACFPLSYFSLQQQFDRANFSVWNNKWSEIYNFTPAYGAWTPLSMKSDESPLAPTMQTQEDGAVSLWKLPSTTVESLGLSVGFSQLIVPLSCG 238
BLAST of mRNA_M-pyrifera_M_contig7595.17918.1 vs. uniprot
Match: V9G2C2_PHYPR (Protein XRP2 n=8 Tax=Phytophthora parasitica TaxID=4792 RepID=V9G2C2_PHYPR) HSP 1 Score: 188 bits (478), Expect = 2.070e-52 Identity = 94/202 (46.53%), Postives = 123/202 (60.89%), Query Frame = 1
Query: 7 LIKEPGSIGGQQFIVEECSGSEVYLLDHTAALTIDVCVDCRIFAGPCESSVFIRDCKDCTIVVACQQFRTRDCSGCTFFLFSATQPVIESSVDLRFACYTLDYFSLAGQFAAANLSVWNNKWSQIFNFTGGEGDWSCLPPGSHHS------RDFATNC------LPEAARQRVGYTDRTNGAVVPLTAGVRGLTPSEETCFV 576
L K PGSI GQQF++E+C +++LLDH ++ ID C++CRI GPCESSVF+R+CK CT+V A QQFR RDC + +L+SAT+P+IE S LRFAC+ L YFSL QF A S WNNKWS++F+FT G W LP H S +D N +P + +G + VVP+T G+ E T FV
Sbjct: 57 LAKLPGSINGQQFLIEDCHNCDIFLLDHCTSVQIDACINCRIVVGPCESSVFLRNCKRCTVVCAVQQFRARDCEDVSVYLYSATEPIIEMSSGLRFACFPLTYFSLQQQFRQAKFSPWNNKWSELFDFTPDHGGWKPLPMRPHESPLAEMMQDKENNGARSLWKMPSWTAEELGLSVDLPQLVVPITNGLCARKDGEPTLFV 258
BLAST of mRNA_M-pyrifera_M_contig7595.17918.1 vs. uniprot
Match: A0A329T3Q5_9STRA (Protein XRP2 n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329T3Q5_9STRA) HSP 1 Score: 187 bits (475), Expect = 5.990e-52 Identity = 94/202 (46.53%), Postives = 124/202 (61.39%), Query Frame = 1
Query: 7 LIKEPGSIGGQQFIVEECSGSEVYLLDHTAALTIDVCVDCRIFAGPCESSVFIRDCKDCTIVVACQQFRTRDCSGCTFFLFSATQPVIESSVDLRFACYTLDYFSLAGQFAAANLSVWNNKWSQIFNFTGGEGDWSCLPPGSHHS----------RDFATNC--LPEAARQRVGYTDRTNGAVVPLTAGVRGLTPSEETCFV 576
L K PGSI GQQF++E+C +++LLDH ++ ID CV+CRI GPCESSVF+R+CK CT+V A QQFRTRDC + +L+SAT+P+IE+S LRFAC+ L YFSL QF S WNNKWS+IF+FT G W LP H S + A + +P + +G + VVP+T+G+ T FV
Sbjct: 59 LAKLPGSINGQQFLIEDCHNCDIFLLDHCTSVQIDACVNCRIVVGPCESSVFLRNCKRCTVVCAVQQFRTRDCEDVSVYLYSATEPIIETSSGLRFACFPLTYFSLQQQFRQVKFSPWNNKWSEIFDFTPDHGGWKPLPMRPHESPLAEMMPEKENNGARSLWKMPSWTAEELGLSVDLPQLVVPITSGLCARKDDVPTLFV 260
BLAST of mRNA_M-pyrifera_M_contig7595.17918.1 vs. uniprot
Match: A0A2P4YDP5_9STRA (Protein XRP2 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YDP5_9STRA) HSP 1 Score: 185 bits (470), Expect = 2.420e-51 Identity = 84/145 (57.93%), Postives = 102/145 (70.34%), Query Frame = 1
Query: 7 LIKEPGSIGGQQFIVEECSGSEVYLLDHTAALTIDVCVDCRIFAGPCESSVFIRDCKDCTIVVACQQFRTRDCSGCTFFLFSATQPVIESSVDLRFACYTLDYFSLAGQFAAANLSVWNNKWSQIFNFTGGEGDWSCLPPGSHHS 441
L K PGSI GQQF++EEC +++LLDH ++ ID CV+CRI GPCESSVF+R+CK CT++ A QQFRTRDC +L+S T P+IE+S LRFAC+ L YFSL QF A S WNNKWS+IFNFT G W LP H S
Sbjct: 60 LAKLPGSINGQQFLIEECHNCDIFLLDHCTSVQIDACVNCRIVVGPCESSVFLRNCKRCTVICAVQQFRTRDCEDVDVYLYSVTDPIIETSSRLRFACFPLTYFSLQQQFRQAKFSPWNNKWSEIFNFTPDHGGWKPLPMHPHAS 204
BLAST of mRNA_M-pyrifera_M_contig7595.17918.1 vs. uniprot
Match: A0A421GK69_9STRA (Protein XRP2 n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GK69_9STRA) HSP 1 Score: 184 bits (467), Expect = 8.340e-51 Identity = 98/219 (44.75%), Postives = 129/219 (58.90%), Query Frame = 1
Query: 7 LIKEPGSIGGQQFIVEECSGSEVYLLDHTAALTIDVCVDCRIFAGPCESSVFIRDCKDCTIVVACQQFRTRDCSGCTFFLFSATQPVIESSVDLRFACYTLDYFSLAGQFAAANLSVWNNKWSQIFNFTGGEGDWSCLPPGSHHSRDFATNC-----------LPEAARQRVGYTDRTNGAVVPLTAGVRGLTPSEETCFVVV-MPKHVDAVLGKLLAS 627
L K PGSI GQQF++E+C +++LLDH ++ ID CV+CRI GPCESSVF+RDCK CT+V A QQFRTRDC +L+SAT+P+IE+S ++FAC+ L YFSL QF A S WNN WS+I+NFT G W LP S A +P + +G + VVPLT+GV + V MPK DA++ ++S
Sbjct: 53 LAKLPGSINGQQFLIEDCHNCDIFLLDHCTSVQIDACVNCRIVVGPCESSVFLRDCKRCTLVCAVQQFRTRDCEDVDVYLYSATEPIIETSSCMKFACFPLTYFSLQQQFRQAKFSPWNNHWSEIYNFTPDHGGWKPLPTQPFESPLAAVMPVEENGARSLWKMPSWTAEELGLSVDLPQLVVPLTSGVCARKENATAVLVCFSMPK--DAIMVDFVSS 269
BLAST of mRNA_M-pyrifera_M_contig7595.17918.1 vs. uniprot
Match: A0A225V0F5_9STRA (Protein XRP2 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225V0F5_9STRA) HSP 1 Score: 182 bits (462), Expect = 3.360e-50 Identity = 92/207 (44.44%), Postives = 125/207 (60.39%), Query Frame = 1
Query: 7 LIKEPGSIGGQQFIVEECSGSEVYLLDHTAALTIDVCVDCRIFAGPCESSVFIRDCKDCTIVVACQQFRTRDCSGCTFFLFSATQPVIESSVDLRFACYTLDYFSLAGQFAAANLSVWNNKWSQIFNFTGGEGDWSCLPPGSHHS-----------RDFATNC--LPEAARQRVGYTDRTNGAVVPLTAGV---RGLTPSEETCFVV 579
L K PG+I GQQF++E+C +++LLDH ++ ID C++CRI GPCESSVF+R+CK CT++ A QQFRTRDC +L+S T P+IE+S +RF C+ L YFSL QF A S WNNKWS+IF+FT G W LP H S + A + +P + +G + VVP+T G+ + TP+ CFVV
Sbjct: 58 LAKLPGTINGQQFVIEDCHNCDIFLLDHCTSVQIDACINCRIVVGPCESSVFLRNCKRCTVICAVQQFRTRDCEDVDVYLYSTTDPIIETSSRMRFTCFPLTYFSLHQQFRQAKFSPWNNKWSEIFDFTPDHGGWKPLPMRLHESPLAEMMQETENSNGARSLWKMPPCTAEELGLSVDLPLLVVPITNGLCARKESTPTLFVCFVV 264
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 390.6 |
Seed ortholog evalue | 8.9e-106 |
Seed eggNOG ortholog | 2880.D7FRD4 |
Preferred name | RP2 |
KEGG ko | ko:K18272 |
Hectar predicted targeting category | other localisation |
GOs | GO:0001654,GO:0001655,GO:0001822,GO:0001894,GO:0001895,GO:0001947,GO:0002009,GO:0003007,GO:0003008,GO:0003143,GO:0003407,GO:0003674,GO:0005096,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005794,GO:0005814,GO:0005815,GO:0005856,GO:0005886,GO:0005929,GO:0006457,GO:0006810,GO:0006892,GO:0007275,GO:0007368,GO:0007389,GO:0007399,GO:0007423,GO:0007507,GO:0007600,GO:0007601,GO:0008047,GO:0008150,GO:0009653,GO:0009790,GO:0009799,GO:0009855,GO:0009887,GO:0009888,GO:0009987,GO:0010842,GO:0012505,GO:0015630,GO:0016020,GO:0016043,GO:0016192,GO:0016604,GO:0022008,GO:0030154,GO:0030182,GO:0030234,GO:0030695,GO:0031410,GO:0031974,GO:0031981,GO:0031982,GO:0032501,GO:0032502,GO:0035050,GO:0035239,GO:0035295,GO:0035845,GO:0036064,GO:0042461,GO:0042592,GO:0042995,GO:0043010,GO:0043085,GO:0043087,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043547,GO:0044093,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044450,GO:0044451,GO:0044459,GO:0044463,GO:0044464,GO:0045494,GO:0046530,GO:0048193,GO:0048468,GO:0048513,GO:0048562,GO:0048568,GO:0048592,GO:0048593,GO:0048598,GO:0048646,GO:0048666,GO:0048699,GO:0048729,GO:0048731,GO:0048793,GO:0048856,GO:0048869,GO:0048871,GO:0050790,GO:0050877,GO:0050953,GO:0051082,GO:0051179,GO:0051234,GO:0051336,GO:0051345,GO:0060041,GO:0060042,GO:0060249,GO:0060429,GO:0060562,GO:0060589,GO:0061371,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0071840,GO:0071944,GO:0072001,GO:0072359,GO:0090596,GO:0097708,GO:0098590,GO:0098772,GO:0120025,GO:0120038,GO:1990075 |
EggNOG free text desc. | post-chaperonin tubulin folding pathway |
EggNOG OGs | KOG2512@1,KOG2512@2759 |
Ec32 ortholog description | retinitis pigmentosa 2 (X-linked recessive) |
Ec32 ortholog | Ec-21_002520.1 |
COG Functional cat. | Q |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko04147 |
Exons | 7 |
Model size | 1197 |
Cds size | 1197 |
Stop | 1 |
Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816658.620049-CDS-M-pyrifera_M_contig7595:1068..1139 | 1622816658.620049-CDS-M-pyrifera_M_contig7595:1068..1139 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig7595 1069..1139 - |
1692278103.2430487-CDS-M-pyrifera_M_contig7595:1068..1139 | 1692278103.2430487-CDS-M-pyrifera_M_contig7595:1068..1139 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig7595 1069..1139 - |
1622816658.6331477-CDS-M-pyrifera_M_contig7595:1217..1581 | 1622816658.6331477-CDS-M-pyrifera_M_contig7595:1217..1581 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig7595 1218..1581 - |
1692278103.2551272-CDS-M-pyrifera_M_contig7595:1217..1581 | 1692278103.2551272-CDS-M-pyrifera_M_contig7595:1217..1581 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig7595 1218..1581 - |
1622816658.6456323-CDS-M-pyrifera_M_contig7595:2929..3159 | 1622816658.6456323-CDS-M-pyrifera_M_contig7595:2929..3159 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig7595 2930..3159 - |
1692278103.2676377-CDS-M-pyrifera_M_contig7595:2929..3159 | 1692278103.2676377-CDS-M-pyrifera_M_contig7595:2929..3159 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig7595 2930..3159 - |
1622816658.6562848-CDS-M-pyrifera_M_contig7595:4524..4616 | 1622816658.6562848-CDS-M-pyrifera_M_contig7595:4524..4616 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig7595 4525..4616 - |
1692278103.278208-CDS-M-pyrifera_M_contig7595:4524..4616 | 1692278103.278208-CDS-M-pyrifera_M_contig7595:4524..4616 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig7595 4525..4616 - |
1622816658.670831-CDS-M-pyrifera_M_contig7595:5859..5979 | 1622816658.670831-CDS-M-pyrifera_M_contig7595:5859..5979 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig7595 5860..5979 - |
1692278103.2862008-CDS-M-pyrifera_M_contig7595:5859..5979 | 1692278103.2862008-CDS-M-pyrifera_M_contig7595:5859..5979 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig7595 5860..5979 - |
1622816658.6831603-CDS-M-pyrifera_M_contig7595:7030..7195 | 1622816658.6831603-CDS-M-pyrifera_M_contig7595:7030..7195 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig7595 7031..7195 - |
1692278103.2943082-CDS-M-pyrifera_M_contig7595:7030..7195 | 1692278103.2943082-CDS-M-pyrifera_M_contig7595:7030..7195 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig7595 7031..7195 - |
1622816658.6942077-CDS-M-pyrifera_M_contig7595:7706..7861 | 1622816658.6942077-CDS-M-pyrifera_M_contig7595:7706..7861 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig7595 7707..7861 - |
1692278103.303035-CDS-M-pyrifera_M_contig7595:7706..7861 | 1692278103.303035-CDS-M-pyrifera_M_contig7595:7706..7861 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig7595 7707..7861 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7595.17918.1 >prot_M-pyrifera_M_contig7595.17918.1 ID=prot_M-pyrifera_M_contig7595.17918.1|Name=mRNA_M-pyrifera_M_contig7595.17918.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=399bp
KVLIKEPGSIGGQQFIVEECSGSEVYLLDHTAALTIDVCVDCRIFAGPCE SSVFIRDCKDCTIVVACQQFRTRDCSGCTFFLFSATQPVIESSVDLRFAC YTLDYFSLAGQFAAANLSVWNNKWSQIFNFTGGEGDWSCLPPGSHHSRDF ATNCLPEAARQRVGYTDRTNGAVVPLTAGVRGLTPSEETCFVVVMPKHVD AVLGKLLASGGGNDSTPPPPPPPPPAAAAASKEDGAAKEVTPRLVRTKLF RPQLAQSKPFFAGSPDALIALAASSAVLGMQWAGRGSKTAAMELLVASGA AATNPAVAAVTPTTAAATTPTTATVTTPATTTTTTAADNDNSNDASAEVM CGESSENTVPPKEGGGQGKGRGNSKASATKAKIFFEQWGEDKGTSLAG* back to topmRNA from alignment at M-pyrifera_M_contig7595:1069..7861- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_M-pyrifera_M_contig7595.17918.1 ID=mRNA_M-pyrifera_M_contig7595.17918.1|Name=mRNA_M-pyrifera_M_contig7595.17918.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6793bp|location=Sequence derived from alignment at M-pyrifera_M_contig7595:1069..7861- (Macrocystis pyrifera P11B4 male) AAGGTGTTGATCAAGGAGCCCGGCAGCATCGGAGGCCAGCAGTTTATCGT
GGAGGAGTGCTCTGGAAGCGAGGTCTACCTACTGGATCATACGGCCGCCC
TCACTATAGACGTCTGCGTCGACTGCCGAATCTTCGCGGGGCCGTGCGAA
TCGAGGTACGAGTTCGAGCAGTAGGTGGCTTTCTTCGCCATGATCTGATA
TAGTAGACTTCGTAATCATGATACGAGCAATCCTCGAGCAATCCTCGGTT
GCATGTACGCTCGACTAATGTATATCGACGACATCCTCGATCGCACAGCC
GATGTTTTATTTTTACTGTCAATAAAGCTACGTAAATCTTCTGCCCTTGA
AAATGCACACACATTTTTAGGTGCCTATATATCCCTAGGTTTCCCCTCTA
GCCCGTTTGCTGTGACCCTGTCATATACAGCGACTTAAAAAAGCGACAAG
TACTGCGATCGTATGGACCTTCTAGAGGAAGAGCGTACACTAGTTTAAGT
ACTATGCGAGTAACGCTGTGCGCGTGTCGTGCATTCATCTCCTCTCCGTT
GCACATTCTACGCATAACCTGCCTCAGCAGCTCCGACTGCTTTATGTCGT
TTACTCCACTCCCTCCCTCCCTTCCTCCCTCCCTCCCTCCCTGGTATAAC
GCCTCATTTACAATAGTGTCTTCATTCGGGACTGCAAGGACTGCACAATA
GTGGTGGCTTGCCAGCAGTTCCGCACGCGGGACTGCTCGGGCTGCACCTT
CTTCTTGTTCAGCGCCACGCAGCCGGTGATAGAGTCATCGGTGGACCTTC
GCTTCGCGTGCTACACGCTTGATTACTTCAGGTGCGAGAGTGGTTGGTTG
AACTCTATCGCCCTGCCCCTAAATACAAGGACATTTTTGGATCTAACATT
GATATGAAAACGTTCCTTCTATTTCGGAACAGCAGCAGCAGGTGCACCGC
TTTAAGAGCGGTCCGTGCTAAGTCGAAACAATATTGTGTTATCTACAGAT
GGCCTTGTTATCCCTTCTTAGCCCTGTTAAGACAGCAGTCTCAGATGGGG
GGCAAACTACTCCCACGAGTAGCTTGTCCCCAAAACGGGACTGCAGTCCT
AAAAGGGCTAAGAGCACAAACTGGCTCCACCGTAGAGGGAAGGCTACACC
CATTTTCACCACGCGTACCGCCTGTACACCACTCGGCTCGGGCGAGTGGC
TCTGATGTAACTCTGTCGAAATTGGACTCGAGAAACATTTTGTTGGCGCA
CCAAAAACAAAGAATCCCCCCGCGCCGGTGCCTATCGTGAAACCAACCAA
AAGGCGTAAAAGCCTAATTCTGCGAAGAAGTAGGGTAGTCGCTCGTCCGA
GCGGCTCTGAGCGGCTGAAAATAAGCGATCTAGAAGTAACCCCCCCCCCA
CCGCAAGCCTTCATGCACATTGAATTTATAAGAGATATGAAACTCTCTTA
AATCGGGGAACATCGAGCGAAGTCGGTGGGATATCAGGAGAAATGCTCAC
ACCACTCTTTTTCGAGACTATAACCGGTTTGACCGCTCCTACTTTCCTAG
TTGTCTTATCTAGGATTATTTCTTAAATACGTGTACAACCCACTACCGTA
CTGTTGTAAAGTGATATCATGCATGCATGATGAGAGGCCTGATTGGAGGG
CATAAGCACCACCACAATCTTTTGCGTTTTCCATGCTGGCCGTGGGAGAT
ACCCATTGTATCGTGCGCCCCAACTCCAACTCCTGTGTGTCGTGTACGTA
GCTTCCGGAGGGTGCCCACGTCAATCCTTGTATGCCGCCCCTGTCAACCG
TCCCTGTCAACCACGGTATAGCGTGGGAAAAAACAGTCTCACCTCCCACC
GTTAACCTCCCCTGCATGTCATATTCGCGCAGTCTTGCCGGACAGTTTGC
TGCGGCTAATCTTTCCGTGTGGAACAACAAGTGGAGCCAGATTTTTAACT
TTACTGGCGGCGAGGGGGACTGGTCGTGCCTACCTCCGGGATCGCACCAC
AGGTGAAAACATTGCCCCGCACCGCAGGAGGTTTTGTACTGGCGTGGAGG
CCTGAACCGCCACTTTTGACAGGCCCGTGGTGCCGGTATTCGGAATCATT
GAGAGTCTCTCAATAGTGTCGGTACCGGCACTGTAACGGGCTCCAGCGTT
ACTACAGCATTCTTTCACGCTGTCAATGATCATTCAGTGTAAGTATTGGG
TTGGATGAGACCTCCAGCTCCGGAGCAGAAGGGCCTCGCCCGGGATAAAC
CCCGCGGTGAGTACGCTCTCCGCGCGGCGCCCATCCCTGGGATTGAAATT
ATCGCGTTGAAAACAAAATGTATATACTACAGTATTCTATCAAACTGCCA
ACGAGCATTCAATGTAAGTATTGGATTGGATGAGGCCTCCTGCTCCGGTC
GGTGGTCCTACCCAAACTTCCTCGTGTTTCTTTGTTCTTGATTAGCCACC
TACCGGGCGCTGTGTTGTCTCGCCCAAACGTGCTTCGTACTGGTATATAT
TAGCCGTGCGTGGGCGCGCCCGCAGAGAAAACTGGCTCAACAACTGGAGA
CAGTGGCAAGCGATTTCACCGGCATTATAGAGAGAGCGGTGGCACTATCC
AACCGGCACTATAGACAGCCCCCCATTGTACGTATTACACGTACTTAGCT
GGTATATTATTCGCGCTGTATCGAATTTATGTGGAGTTTTATGCCGTGCA
GAGATTTTGCCTAAGTAGGGAGATGCGAAACACCAGGTTGTTTGTCAGCA
CCAACTGCGAGTGCAGTACGCACGGGACACTACAAAAGAAACCCTTAGGT
TGGACCAGATTCAAAGGCAAATTTAAATGAGGCAGGGTGTGTATCCTTAA
AGAACTTCAGTGTAAAATAATAGTCTTCTTTGTGTTTGGTGTATGTAGGT
GAAACAAACGTTCTAAACGTCGGAGAGATAATGTACAGACAGGTCATCTA
GACCATCTATACCCTAGCGTGCCGTTATGAGGTGCTGTGCATGATATGTG
CAGTACAGATCCAATCCAGAAAAGCAAACCGTATAGATCATGCAGAATAT
TCGGGTCCCGCCTGACAGCATGAGCTATTATTTGATCTTACACAGATCCG
CGATACATCCACCCTGAAATATCTCGATCATGAATTGGACTTCGATGATC
TGTCCCAGGTGCTAAACTTTCTTAACTCCGGATTTCTTACATGCTGTCGC
GTGCTGTTGCCACGTACGCTCGTGGTTCCGCCTCTGAAAACGGAGCAGAG
ATTTCGCGACGAACTGCCTACCAGAAGCCGCGAGGCAAAGGGTGGGATAC
ACGGACCGCACGAACGGAGCAGTCGTCCCTCTCACCGGTGAGTCTTCAGG
GTTTCGTATGTACCTGGCAGGGGTTTTCTGATATATTCGATATATCGATG
TCTCCGATAAACGAATATATGGTAGTAATGAATTCACACTATTGCTGACT
CGAGTATTTGCTTATTCAAGTTCAGCGACCCAACCATACCCTATGACCTA
CTGAGTGTATTAAAGAAGAAAAACGATCGCAAAAAAATGGACAAATAATT
ACTATCCCCTATCTCCGAACGCACAGCGGGTGCCTACCTCAGCTTACCAA
TACCTAATTACAGTCCACCCCGGTTCTGTTTCACAGTTTCTTATTCCTGC
TCTGAATTTAACGCCCGGAGGCATGTATGAATATAGAATACACATTGTGC
CTCGTGGGTAGAAACTACTGTAGTTAACGCCTTCAATGGCAGTAGATGGA
TACATTCAAGTTTAGGCGTTGTATCATACCTGGTAGGGTTTATTTTGCAG
GAATATATCGCATCCAACTTTAGTTGATACTATTGATATGTTAATTCATT
AATCTAATGATTCATTGATTCACTCACGATTTCACGCCGTTTTATATCAG
CGCTCACTACCATTAATAGTAAATTAGCTGCTTCATCGTGGCCCCGCCGC
CGTGGGGGTGGGAGGGGCACATATCGCCTACCAGATAGTTATATATATAC
AGCTCTATGAAAATAACATCGGTTGTGCTCTCGCTTGAAGACGACGTTAC
CTGAGTAGGGAGGTGACGCCCACGGCGTTGTTAGCGCCTGTGACAAGCGC
CTGGAACGGAGTGTAGAGCACGCCTCTCCTCACTTCCGCAAGCCTACATA
TCTCACGAGAACTCATTCACACCACTGAGTGTACAAATGGGAAAATGTGA
TTTTACCACCCGTCTCCAGGATTTCATTTATTTTCTCTGCGAGAAGTGGG
AGTTGCTCTCTAGGGGGTTGAAGCCAACAACAAGCAGCCCAGTCTATATA
TTTAAGCTCTCCAATGAACGCGCTAAGATGTTGGTCAGCAGCGGTATTAC
CATACGCTTGATGAGCGTACCATATACGCGTTCCGAGCGAACATGTACTT
GCATATGTATAGCTGTTTACCAAGAACTATATAGGCACTGTTGGGGAAAA
CAAACGAAGCGAACGTGAATATCATGCCTGCAGCAGTACGTGAACTAAAC
AGATCACCTCATCCAAACTCCATCCATCCGTTGTATACATGTGTATGTAT
ATATGTATGTCTTTCTCTCACCTCTTGCTCCGCCCCCTTGCTTGGTAAAA
TTTACCTCTCTCTCTCGCCCCCATCTCACGCGCAACCCACACCCCCTTCT
TCCTGTTCGTGACCACGCTTCTTCCTGTTCGTGACCACGCCACGACCACC
AGCTGGTGTCCGAGGCTTGACACCGTCCGAAGAGACATGCTTCGTCGTCG
TCATGCCTAAGCACGTCGACGCCGTCCTGGGAAAACTCTTGGCCTCGGGA
GGTGGGAACGACTCTACTCCTCCTCCTCCTCCTCCTCCTCCGCCTGCTGC
GGCTGCTGCTTCAAAGGAAGATGGAGCTGCTAAGGAGGTGACCCCTAGGC
TGGTCAGAACGAAACTCTTCCGCCCTCAACTGGTGAGTTGTACGTGGAAG
GAATTTGTAGAGCGGTGGTAGTGGACCAGGAATGGCGGGTGGGGAGGAGG
GGAGGATAGCAGGGGGGGGGTGATGGACCAGGAACGAGGAGGTAGGGGGG
GAAGACGGTAGGGGAAGGGGAGGGGGGAGACGAGGGGGAGCGAGGGGGTG
GAAGAAGGGGAGAAGAGGGAGGGGCGGGGTAGGGTAGAGGGAGAAGAGGA
GTAGAGGAGGTTGTCTAGATATTCGTCCACGTGATTGCGAGTTTCAGTCG
CAGTGTTGTTGCCGCCGATTCAAGAGAAATATGGGGCATTGCTTCCACCA
GAGACTCGTGTTGGAAAAACAGCCAAGAGACTGAGTTTGTTGTAGTAGGT
TTGCCTGTCATGCTCATCGCCGCATTCCGAGGTAGGGCTGGGAGAATCAA
GTATCACCAAGCGTTTCATATACCGGTCGCCCTACTGGAGTTCTTAGTTT
GGCTAGAGAGGCGATCTTAGCAAAGGGCCTAGAAAAAGGCAGGATATTCA
TGCTTAATACGCAGGGGGAGACTTATGCAATAACAGCCATCACGGCAACA
CCACTCAAGACATACTATTGAAGACCGCTCCTCTACACACGTGCACGTGG
ATCTTTATTATGCGGACGATGTGCTCCGTAGAGGCGAGACGAGGAGGGAG
TCTCCAACGAGAGGTCAAGCTCACGCTATCATAAGAAAGAACGACACTCT
CGTAAGAATAGCCATGGACGAAAACATGTCTAGCATTAACAAATGAAAAG
TAAAAGGCACCGACGTCCACGTTTCTTGCCTCCCTGCATCTCATACCACC
GTCCCTCCCCCCACTTCGTAGCCACCCCGGATTCGACGCCCAGCGACAAC
AACGCCAACAACGCACACATTATCGCCACACGTGCATCGCTTTGACCCCC
CTCTCTCGCGTGTACTCTTGGTTTGTTTTTTGCTACCGCCGCCGCGATCT
CCACAATGTTACTGAGTTATTTGTTACTCGCGGTCCCGTACTGTACGTAC
AGTCACTCCGCGACAACAACGACGGCGACGTCCAACGCGATGCCGCCTTA
ATTTTTTCACCGTGGTTATCTTCAACCACAATCGTGTTTGCCTCAAACCA
CGATCGTGCTTGCCTTGAAACACTGTCATATGCCTCAAACCACTACCGTG
ATTGCCTTAAACCACTGTCATATGCCTTAAATCACTATCGTGTGTGCCTT
AAACCGATATAGTGCTTGCCATAGGCCGCCATCATGTGTTTAGTTAGCCT
CGCCACCGTAACATATTCCCACATCATTCCCCATACACGCACGCGCACGC
GCACACGCACACGCGCACACGCACCCGCAGGCCCAAAGCAAACCGTTCTT
CGCGGGATCTCCGGACGCCCTCATCGCCCTCGCGGCCTCCTCCGCCGTGC
TGGGCATGCAGTGGGCGGGACGAGGGAGCAAGACTGCAGCGATGGAACTT
CTTGTCGCTTCCGGTGCCGCCGCCACCAACCCCGCTGTTGCTGCTGTTAC
CCCCACCACCGCCGCCGCGACCACCCCCACCACCGCCACCGTCACCACCC
CCGCGACCACCACCACCACCACCGCCGCCGACAACGACAACAGCAACGAT
GCCTCAGCCGAGGTAATGTGTGGGGAAAGCAGTGAAAACACGGTGCCACC
TAAAGAAGGAGGGGGACAGGGCAAGGGTAGGGGCAATAGTAAGGGTAAGG
GGCAGGGAGGGGCGGAGGGGGAGGGTGCAGCGATGGCGACGACGGAGTTC
TACATGGCGGATAGCGTGGAAGCGTCGGCAACCAAGGCTAAGATTTTCTT
CGAGCAGTGGGGGGAGGACAAGGGGACCTCATTAGCCGGCTAA back to topCoding sequence (CDS) from alignment at M-pyrifera_M_contig7595:1069..7861- >mRNA_M-pyrifera_M_contig7595.17918.1 ID=mRNA_M-pyrifera_M_contig7595.17918.1|Name=mRNA_M-pyrifera_M_contig7595.17918.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2394bp|location=Sequence derived from alignment at M-pyrifera_M_contig7595:1069..7861- (Macrocystis pyrifera P11B4 male) AAGGTGTTGATCAAGGAGCCCGGCAGCATCGGAGGCCAGCAGTTTATCGT GGAGGAGTGCTCTGGAAGCGAGGTCTACCTACTGGATCATACGGCCGCCC TCACTATAGACGTCTGCGTCGACTGCCGAATCTTCGCGGGGCCGTGCGAA TCGAGAAGGTGTTGATCAAGGAGCCCGGCAGCATCGGAGGCCAGCAGTTT ATCGTGGAGGAGTGCTCTGGAAGCGAGGTCTACCTACTGGATCATACGGC CGCCCTCACTATAGACGTCTGCGTCGACTGCCGAATCTTCGCGGGGCCGT GCGAATCGAGTGTCTTCATTCGGGACTGCAAGGACTGCACAATAGTGGTG GCTTGCCAGCAGTTCCGCACGCGGGACTGCTCGGGCTGCACCTTCTTCTT GTTCAGCGCCACGCAGCCGGTGATAGAGTCATCGGTGGACCTTCGCTTCG CGTGCTACACGCTTGATTACTTCAGTGTCTTCATTCGGGACTGCAAGGAC TGCACAATAGTGGTGGCTTGCCAGCAGTTCCGCACGCGGGACTGCTCGGG CTGCACCTTCTTCTTGTTCAGCGCCACGCAGCCGGTGATAGAGTCATCGG TGGACCTTCGCTTCGCGTGCTACACGCTTGATTACTTCAGTCTTGCCGGA CAGTTTGCTGCGGCTAATCTTTCCGTGTGGAACAACAAGTGGAGCCAGAT TTTTAACTTTACTGGCGGCGAGGGGGACTGGTCGTGCCTACCTCCGGGAT CGCACCACAGTCTTGCCGGACAGTTTGCTGCGGCTAATCTTTCCGTGTGG AACAACAAGTGGAGCCAGATTTTTAACTTTACTGGCGGCGAGGGGGACTG GTCGTGCCTACCTCCGGGATCGCACCACAGCAGAGATTTCGCGACGAACT GCCTACCAGAAGCCGCGAGGCAAAGGGTGGGATACACGGACCGCACGAAC GGAGCAGTCGTCCCTCTCACCGCAGAGATTTCGCGACGAACTGCCTACCA GAAGCCGCGAGGCAAAGGGTGGGATACACGGACCGCACGAACGGAGCAGT CGTCCCTCTCACCGCTGGTGTCCGAGGCTTGACACCGTCCGAAGAGACAT GCTTCGTCGTCGTCATGCCTAAGCACGTCGACGCCGTCCTGGGAAAACTC TTGGCCTCGGGAGGTGGGAACGACTCTACTCCTCCTCCTCCTCCTCCTCC TCCGCCTGCTGCGGCTGCTGCTTCAAAGGAAGATGGAGCTGCTAAGGAGG TGACCCCTAGGCTGGTCAGAACGAAACTCTTCCGCCCTCAACTGCTGGTG TCCGAGGCTTGACACCGTCCGAAGAGACATGCTTCGTCGTCGTCATGCCT AAGCACGTCGACGCCGTCCTGGGAAAACTCTTGGCCTCGGGAGGTGGGAA CGACTCTACTCCTCCTCCTCCTCCTCCTCCTCCGCCTGCTGCGGCTGCTG CTTCAAAGGAAGATGGAGCTGCTAAGGAGGTGACCCCTAGGCTGGTCAGA ACGAAACTCTTCCGCCCTCAACTGGCCCAAAGCAAACCGTTCTTCGCGGG ATCTCCGGACGCCCTCATCGCCCTCGCGGCCTCCTCCGCCGTGCTGGGCA TGCAGTGGGCGGGACGAGGGAGCAAGACTGCAGCGATGGAACTTCTTGTC GCTTCCGGTGCCGCCGCCACCAACCCCGCTGTTGCTGCTGTTACCCCCAC CACCGCCGCCGCGACCACCCCCACCACCGCCACCGTCACCACCCCCGCGA CCACCACCACCACCACCGCCGCCGACAACGACAACAGCAACGATGCCTCA GCCGAGGTAATGTGTGGGGAAAGCAGTGAAAACACGGTGCCACCTAAAGA AGGAGGGGGACAGGGCAAGGGTAGGGGCAATAGTAAGGGCCCAAAGCAAA CCGTTCTTCGCGGGATCTCCGGACGCCCTCATCGCCCTCGCGGCCTCCTC CGCCGTGCTGGGCATGCAGTGGGCGGGACGAGGGAGCAAGACTGCAGCGA TGGAACTTCTTGTCGCTTCCGGTGCCGCCGCCACCAACCCCGCTGTTGCT GCTGTTACCCCCACCACCGCCGCCGCGACCACCCCCACCACCGCCACCGT CACCACCCCCGCGACCACCACCACCACCACCGCCGCCGACAACGACAACA GCAACGATGCCTCAGCCGAGGTAATGTGTGGGGAAAGCAGTGAAAACACG GTGCCACCTAAAGAAGGAGGGGGACAGGGCAAGGGTAGGGGCAATAGTAA GGCGTCGGCAACCAAGGCTAAGATTTTCTTCGAGCAGTGGGGGGAGGACA AGGGGACCTCATTAGCCGGCTAACGTCGGCAACCAAGGCTAAGATTTTCT TCGAGCAGTGGGGGGAGGACAAGGGGACCTCATTAGCCGGCTAA back to top
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