prot_M-pyrifera_M_contig7590.17911.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig7590.17911.1
Unique Name	prot_M-pyrifera_M_contig7590.17911.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	372

Homology

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BLAST of mRNA_M-pyrifera_M_contig7590.17911.1 vs. uniprot
Match: D7G1W1_ECTSI (Carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 6 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1W1_ECTSI)

HSP 1 Score: 355 bits (912), Expect = 3.330e-115
Identity = 209/381 (54.86%), Postives = 245/381 (64.30%), Query Frame = 0

Query:    1 MVAADMGHLKDTVEKLDLAFRETMGRQGKDLAAVVDQLGLR--SAESLQGSANRTPNAAAEQSFGKTKGNGDEKIRPAASDPAGNNSPNK-NLASGNI-GTGQYQQLQSQQG--HATADFQGFEKSEGGGAXXXXXXXGLWSQVGEXXXXXXXXPXXXXXXGESV-VWNAYSRGKWVNGQWVPKVLPDDTTPDVPSLV---KNQRRVLLLSERRSGGHAVGGILNADPRVFYVGDPCRMGGGPEALDGHACSLALSRLLACQPTVNDIRNLYSFSYIVGRSRALSEFEDLRWRVGGSPEDNDELVRDKLVQQCRLSKAVVIKETRLPEVTPQLTTEELGTEFLHIVRDPRAAVHGLAEAWEGSKSNYNLAMAEDCTELASR 371
            MVAADMGHLKDTVEKLD   RETMG+ GKDLAAV+ QLGL   S  +L   +   P  A   +  K +G       PA   P      ++  LA G+  G G    L +  G  H        + S  GG        G  +Q                   E V VWNAY RGKWVNGQWVPKVL DDT+PD+  L    K QRRVLLLSE+RSGGHAVGG+LNAD RVFYV DPCRMGGGPEALD  ACSLA++RLLACQPT NDIRNL+SFSYIV RSR LSE E LRW+  G+P++NDE  R  +++QCRLS  VV+KETRL EV P+L+T EL  EFLHIVRDPRAA+HG+AE WE S +    +MA DC+++ASR
Sbjct:    1 MVAADMGHLKDTVEKLDHIVRETMGQHGKDLAAVLVQLGLERPSRSNLVAGSESRPMPAEGLTNNKARG-----ATPAWPSPLQQAPQDQLQLAGGSRQGQGDASVLGAGGGVDHVAVRGTAEDGSLAGGGPTTGKALGRDTQGNGKGAAGGLTEEGARGAAEGVAVWNAYQRGKWVNGQWVPKVLQDDTSPDLSQLATTGKKQRRVLLLSEKRSGGHAVGGVLNADTRVFYVADPCRMGGGPEALDAGACSLAVTRLLACQPTTNDIRNLFSFSYIVERSRVLSESEGLRWQAEGTPDENDEETRAAVIRQCRLSSVVVVKETRLAEVAPRLSTPELDLEFLHIVRDPRAAIHGMAELWEKSDNKMERSMARDCSDVASR 376

[Close]

BLAST of mRNA_M-pyrifera_M_contig7590.17911.1 vs. uniprot
Match: A0A835ZGF5_9STRA (HEAT repeat-containing protein 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGF5_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 1.770e-12
Identity = 54/182 (29.67%), Postives = 78/182 (42.86%), Query Frame = 0

Query:  191 VKNQRRVLLLSERRSGGHAVGGILNADPRVFYVGDPCRMGG-GPEALDGHACSLALSRLLACQPTVNDIRNLYSFSYIVGRSRALSEFEDLRWRVGGSPEDNDELVRDKLVQQCRLSKAVVIKETRLPEVTPQLTTEELGTEFLHIVRDPRAAVHGLAEAWEGSKSNYNLAMAEDCTELASR 371
            V  Q+R+L++SE RSG    G + N++ ++FY+ +PC+ GG G  AL   AC   L RLL C+PTV D+ N++                                 RD      R S  VV+KE R   V   +      T+ +H+VRDPR A+      W G          E C    ++
Sbjct:  244 VAEQKRLLIVSEPRSGSTQFGELFNSNEQLFYLFEPCKGGGDGGTALYDEACGYLLQRLLECEPTVKDVDNMF---------------------------------RD------RQSAGVVVKEIRTVGVHVDMLPR--ATKVMHLVRDPRDAMLSALALWRGQDGGLEFQSGEFCRRTMAK 384

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig7590.17911.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig7590.17911.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G1W1_ECTSI	3.330e-115	54.86	Carbohydrate (N-acetylglucosamine 6-O) sulfotransf...	[more]
A0A835ZGF5_9STRA	1.770e-12	29.67	HEAT repeat-containing protein 1 n=1 Tax=Tribonema...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 169..344

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig7590	contig	M-pyrifera_M_contig7590:2413..12404 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig7590.17911.1	mRNA_M-pyrifera_M_contig7590.17911.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig7590 2413..12404 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig7590.17911.1 ID=prot_M-pyrifera_M_contig7590.17911.1|Name=mRNA_M-pyrifera_M_contig7590.17911.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=372bp
MVAADMGHLKDTVEKLDLAFRETMGRQGKDLAAVVDQLGLRSAESLQGSA
NRTPNAAAEQSFGKTKGNGDEKIRPAASDPAGNNSPNKNLASGNIGTGQY
QQLQSQQGHATADFQGFEKSEGGGAGGGAGGGGLWSQVGEGGGGGDGKPA
QGEGGGESVVWNAYSRGKWVNGQWVPKVLPDDTTPDVPSLVKNQRRVLLL
SERRSGGHAVGGILNADPRVFYVGDPCRMGGGPEALDGHACSLALSRLLA
CQPTVNDIRNLYSFSYIVGRSRALSEFEDLRWRVGGSPEDNDELVRDKLV
QQCRLSKAVVIKETRLPEVTPQLTTEELGTEFLHIVRDPRAAVHGLAEAW
EGSKSNYNLAMAEDCTELASR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase