mRNA_M-pyrifera_M_contig75872.17902.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig75872.17902.1 vs. uniprot
Match: A0A813CKH8_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813CKH8_9DINO) HSP 1 Score: 85.9 bits (211), Expect = 1.350e-18 Identity = 43/93 (46.24%), Postives = 67/93 (72.04%), Query Frame = 1 Query: 1 VQELGVVVGADVRSRTILHDIFSAIFGVFGGESRLYTALVDENRDAARSRMVEQAKALGATSVVSLREIHGMTVNRIVVGLHTVSVIYGTAVR 279 VQE+GVV G DVR++ + DI SAI G+FGGE+ Y+ L++E+ A+ ++V+ A L A +VV +R T+NR++VGLH++ ++YGTAV+ Sbjct: 61 VQEIGVVSGGDVRTKNLFKDILSAITGMFGGETTHYSHLLNESSAASMDKLVDHAMKLDADAVVGIRFNTAATMNRLIVGLHSLVMVYGTAVK 153
BLAST of mRNA_M-pyrifera_M_contig75872.17902.1 vs. uniprot
Match: A0A6U1PGH0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1PGH0_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 9.890e-18 Identity = 47/93 (50.54%), Postives = 60/93 (64.52%), Query Frame = 1 Query: 4 QELGVVVGADVRSRTILHDIFSAIFGVFGGESRLYTALVDENRDAARSRMVEQAKALGATSVVSLREIHGMTVNRIVVGLHTVSVIYGTAVRC 282 +E+G V V+SR+ILHD+ SAI G FGGES Y+ L+D+ A +M AKA GAT+VV LR H +NR+V GLH + YGTAV C Sbjct: 71 EEIGFVSAGVVQSRSILHDVASAIKGFFGGESHHYSDLLDQASRDAVIKMARMAKAEGATAVVRLRLNHQAVMNRLVFGLHVSVLAYGTAVIC 163
BLAST of mRNA_M-pyrifera_M_contig75872.17902.1 vs. uniprot
Match: A0A6G0WFB8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WFB8_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 2.640e-17 Identity = 42/95 (44.21%), Postives = 63/95 (66.32%), Query Frame = 1 Query: 1 VQELGVVVGADVRSRTILHDIFSAIFGVFGGESRLYTALVDENRDAARSRMVEQAKALGATSVVSLREIHGMTVNRIVVGLHTVSVIYGTAVRCR 285 ++E+G+V VR++ I+ DIF+A+ GVFGGE+R Y+ L++E A R+ A A GAT+VV + T+NR + GLH+ ++YGTAV CR Sbjct: 54 IEEIGIVSATVVRTKNIVEDIFAALGGVFGGETRSYSVLMNETTQEAVHRLKGAAIAQGATAVVMTKFEINTTMNRFIFGLHSTVLVYGTAVVCR 148
BLAST of mRNA_M-pyrifera_M_contig75872.17902.1 vs. uniprot
Match: A0A3R6Z2M4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6Z2M4_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 9.190e-17 Identity = 43/95 (45.26%), Postives = 62/95 (65.26%), Query Frame = 1 Query: 1 VQELGVVVGADVRSRTILHDIFSAIFGVFGGESRLYTALVDENRDAARSRMVEQAKALGATSVVSLREIHGMTVNRIVVGLHTVSVIYGTAVRCR 285 ++ELGVV VR++ IL DI +A+ G+FGGE+R Y++L++E A R+ A A GA++VV + T+NR V GLH ++YGTAV CR Sbjct: 35 IEELGVVSATVVRTKNILEDILAALGGMFGGETRSYSSLMNETTQEAVHRLKGAALAQGASAVVMTKFETNTTMNRFVFGLHCTVLVYGTAVVCR 129
BLAST of mRNA_M-pyrifera_M_contig75872.17902.1 vs. uniprot
Match: A0A5A8CHI0_CAFRO (Uncharacterized protein n=4 Tax=Sar TaxID=2698737 RepID=A0A5A8CHI0_CAFRO) HSP 1 Score: 77.8 bits (190), Expect = 1.050e-14 Identity = 39/92 (42.39%), Postives = 62/92 (67.39%), Query Frame = 1 Query: 4 QELGVVVGADVRSRTILHDIFSAIFGVFGGESRLYTALVDENRDAARSRMVEQAKALGATSVVSLREIHGMTVNRIVVGLHTVSVIYGTAVR 279 Q +GVV A+VRSR ++ D+++A+ G FGGE+ YT L++E+ AA R V + K LG +V++R ++NR+V+G+H + YGTAV+ Sbjct: 392 QVIGVVSAANVRSRNLMADLWTALAGAFGGEAGYYTHLMNESTSAAMDRAVHRTKELGGDGLVNVRFEMATSMNRLVMGMHASVICYGTAVK 483
BLAST of mRNA_M-pyrifera_M_contig75872.17902.1 vs. uniprot
Match: E8WLY2_GEOS8 (UPF0145 protein GM18_0213 n=5 Tax=Geobacteraceae TaxID=213422 RepID=E8WLY2_GEOS8) HSP 1 Score: 64.3 bits (155), Expect = 2.310e-11 Identity = 39/89 (43.82%), Postives = 56/89 (62.92%), Query Frame = 1 Query: 13 GVVVGADVRSRTILHDIFSAIFGVFGGESRLYTALVDENRDAARSRMVEQAKALGATSVVSLREIHGMTVNRIVVGLHTVSVIYGTAVR 279 G+V G+ VRS+ DI ++ +FGGE + YT L+D+ R A +RMVEQA ALGA +VV++R + + + G + IYGTAVR Sbjct: 19 GLVCGSTVRSKNAFKDIGASFKNMFGGELKSYTRLLDDTRQEAINRMVEQATALGANAVVNVR----FSTSDVAAGAAEIY-IYGTAVR 102
BLAST of mRNA_M-pyrifera_M_contig75872.17902.1 vs. uniprot
Match: UPI00141214A8 (YbjQ family protein n=1 Tax=Acutalibacter sp. 1XD8-36 TaxID=2320852 RepID=UPI00141214A8) HSP 1 Score: 62.0 bits (149), Expect = 1.900e-10 Identity = 39/93 (41.94%), Postives = 58/93 (62.37%), Query Frame = 1 Query: 1 VQELGVVVGADVRSRTILHDIFSAIFGVFGGESRLYTALVDENRDAARSRMVEQAKALGATSVVSLREIHGMTVNRIVVGLHTVSVIYGTAVR 279 +Q LGVV G+ ++S+ I DI + GGE + YT ++DE R+ A RMVEQA+ +GA ++VSLR + + I+ G V + YGTAV+ Sbjct: 14 IQALGVVTGSTIQSKNIGKDIGQGFKTLVGGELKSYTKMMDEARNIAMQRMVEQAQQMGADAIVSLR----FSGSAIMAGAAEV-LAYGTAVK 101
BLAST of mRNA_M-pyrifera_M_contig75872.17902.1 vs. uniprot
Match: A0A4V2P8C6_9GAMM (UPF0145 protein EV695_3212 n=1 Tax=Cocleimonas flava TaxID=634765 RepID=A0A4V2P8C6_9GAMM) HSP 1 Score: 62.0 bits (149), Expect = 2.040e-10 Identity = 37/91 (40.66%), Postives = 57/91 (62.64%), Query Frame = 1 Query: 4 QELGVVVGADVRSRTILHDIFSAIFGVFGGESRLYTALVDENRDAARSRMVEQAKALGATSVVSLREIHGMTVNRIVVGLHTVSVIYGTAV 276 + LG+V G+ VR++ DI S I +FGGE YT L+ E+R+ A RM+EQA+++GA +V+++R + + I G + V YGTAV Sbjct: 16 KHLGLVQGSSVRAKHAGRDIMSGIKNMFGGELTAYTELLQESREEATERMIEQARSVGANAVLNVR----FSTSSITAGAAEIYV-YGTAV 101
BLAST of mRNA_M-pyrifera_M_contig75872.17902.1 vs. uniprot
Match: A0A832J9A5_9GAMM (UPF0145 protein ENJ65_06075 n=1 Tax=Candidatus Tenderia electrophaga TaxID=1748243 RepID=A0A832J9A5_9GAMM) HSP 1 Score: 61.6 bits (148), Expect = 2.630e-10 Identity = 28/67 (41.79%), Postives = 48/67 (71.64%), Query Frame = 1 Query: 1 VQELGVVVGADVRSRTILHDIFSAIFGVFGGESRLYTALVDENRDAARSRMVEQAKALGATSVVSLR 201 +Q LG+V G VR++ + DI + + +FGGE + YT L+ E+R+ A +RM++QA+A GA +V+++R Sbjct: 15 IQHLGLVQGNSVRAKHVGRDIMAGLKNIFGGELKGYTELLQESREEAMARMIDQAEAAGANAVLNIR 81
BLAST of mRNA_M-pyrifera_M_contig75872.17902.1 vs. uniprot
Match: A0A081C1R5_9BACT (UPF0145 protein U27_05494 n=1 Tax=Candidatus Vecturithrix granuli TaxID=1499967 RepID=A0A081C1R5_9BACT) HSP 1 Score: 61.6 bits (148), Expect = 2.630e-10 Identity = 30/67 (44.78%), Postives = 47/67 (70.15%), Query Frame = 1 Query: 1 VQELGVVVGADVRSRTILHDIFSAIFGVFGGESRLYTALVDENRDAARSRMVEQAKALGATSVVSLR 201 V+ GVV G+ VR++ I DI++ I + GGE + YT L+ E+R A SRM+++AK LGA ++V++R Sbjct: 15 VEHFGVVSGSTVRAKHIGKDIWAGIKNIVGGEMKGYTELLQESRQEATSRMIQEAKQLGANAIVNIR 81 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig75872.17902.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig75872.17902.1 >prot_M-pyrifera_M_contig75872.17902.1 ID=prot_M-pyrifera_M_contig75872.17902.1|Name=mRNA_M-pyrifera_M_contig75872.17902.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=95bp VQELGVVVGADVRSRTILHDIFSAIFGVFGGESRLYTALVDENRDAARSRback to top mRNA from alignment at M-pyrifera_M_contig75872:2..286+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig75872.17902.1 ID=mRNA_M-pyrifera_M_contig75872.17902.1|Name=mRNA_M-pyrifera_M_contig75872.17902.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=285bp|location=Sequence derived from alignment at M-pyrifera_M_contig75872:2..286+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig75872:2..286+ >mRNA_M-pyrifera_M_contig75872.17902.1 ID=mRNA_M-pyrifera_M_contig75872.17902.1|Name=mRNA_M-pyrifera_M_contig75872.17902.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=570bp|location=Sequence derived from alignment at M-pyrifera_M_contig75872:2..286+ (Macrocystis pyrifera P11B4 male)back to top |