prot_M-pyrifera_M_contig75826.17887.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig75826.17887.1
Unique Nameprot_M-pyrifera_M_contig75826.17887.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length185
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig75826.17887.1 vs. uniprot
Match: A0A5K7XQN8_9BACT (Uncharacterized protein n=1 Tax=Lacipirellula parvula TaxID=2650471 RepID=A0A5K7XQN8_9BACT)

HSP 1 Score: 56.6 bits (135), Expect = 3.090e-6
Identity = 53/172 (30.81%), Postives = 81/172 (47.09%), Query Frame = 0 
Query:    3 PILSGLTTGTTEVTITPTGEVKDVVLSDELIEAFAAAEEGQDGAGGLFALLGIGMDAETVKLAIADSVIQLPAEAQDAGGSWGNTTELEM---GPAKQITEKTFTLEGTEERDGKKLAKITLASEMMLEIDEDNEAEVELEITEQESTGALYFDISAGKTVDSSTETVITLE 171
            P+L  +T     +T+TP GEV +VV+ D + EA     + Q GA  +  L      AE  K  +  +   LP E    G  W +TTE ++   G  K +T  T+  EG  +++G KL K T   ++       +  EV +E+  QES G + F+  AG+   S    V  L+
Sbjct:  122 PLLKAITGNVFIITMTPRGEVTNVVVPDAVTEAL----KNQPGAPQMGELA----SAEGFKKLVGQASFVLP-EGLTVGKEWTSTTESKLPVVGTQKAVT--TYKFEGPIDQEGTKLEKFTAKVDISF-----SGGEVTVEVPSQESNGEILFNAEAGRLEQSKITQVTNLK 277
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig75826.17887.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A5K7XQN8_9BACT3.090e-630.81Uncharacterized protein n=1 Tax=Lacipirellula parv... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig75826contigM-pyrifera_M_contig75826:456..1010 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig75826.17887.1mRNA_M-pyrifera_M_contig75826.17887.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig75826 456..1010 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig75826.17887.1 ID=prot_M-pyrifera_M_contig75826.17887.1|Name=mRNA_M-pyrifera_M_contig75826.17887.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=185bp
MGPILSGLTTGTTEVTITPTGEVKDVVLSDELIEAFAAAEEGQDGAGGLF
ALLGIGMDAETVKLAIADSVIQLPAEAQDAGGSWGNTTELEMGPAKQITE
KTFTLEGTEERDGKKLAKITLASEMMLEIDEDNEAEVELEITEQESTGAL
YFDISAGKTVDSSTETVITLEGESPMGEIIMERTV
back to top