mRNA_M-pyrifera_M_contig75809.17881.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig75809.17881.1
Unique NamemRNA_M-pyrifera_M_contig75809.17881.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig75809.17881.1 vs. uniprot
Match: A0A7Y2DNM7_9ACTN (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DNM7_9ACTN)

HSP 1 Score: 371 bits (953), Expect = 1.060e-124
Identity = 187/250 (74.80%), Postives = 212/250 (84.80%), Query Frame = 1
Query:   10 VRLRPMFPELLRAMGKVEGIRRVRYTSPHPKDMTPDVYSAMAETPNVVPHLHFPLQSGSDRILAAMHRGYTAERYLEKLAEARSMIPDLAVSTDIIVGFPGETDADFERTLEVAAAAEYDSAYTFVYSPRPGTEAAEMVDDFCDPDVVKERYKALRTVIERSALAKYRARIGMVEEVIVEGPSKKDPNVLTGRTAQNKLVHFPAAPLPQGAGRVGTYVTVRVSDAKHQYMLGDFVEVTHRATHRTKIPVL 759
            VR+RP F +LLR++  V GIRRVRYTSPHPKDMT +V+ AMAETP V+PHLHFPLQSGSDRIL AMHRGYTA+R+L KLA AR+ IPDLAV+TDIIVGFPGETD DFERTLEVAAAAE+DSA+TFVYSPRPGTEAAE+VDDFCDP VVK+RY  LRTV ERSALAK+  RIG +EEVIVEGPSKKDP+ LTGRT QNKLVHF     P G  R GTY  V V++   QY++GDF+EVT +ATHRT+IPVL
Sbjct:  223 VRIRPAFAQLLRSVSAVRGIRRVRYTSPHPKDMTAEVFDAMAETPEVMPHLHFPLQSGSDRILTAMHRGYTADRFLTKLAAARATIPDLAVTTDIIVGFPGETDDDFERTLEVAAAAEFDSAFTFVYSPRPGTEAAELVDDFCDPAVVKDRYARLRTVTERSALAKHSERIGRLEEVIVEGPSKKDPSRLTGRTGQNKLVHFDR---PDGPLRPGTYARVEVTEGHTQYLMGDFLEVTTKATHRTRIPVL 469          
BLAST of mRNA_M-pyrifera_M_contig75809.17881.1 vs. uniprot
Match: A0A8F4FV63_9ACTN (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=1 Tax=Aquihabitans sp. G128 TaxID=2849779 RepID=A0A8F4FV63_9ACTN)

HSP 1 Score: 347 bits (890), Expect = 5.760e-115
Identity = 178/255 (69.80%), Postives = 208/255 (81.57%), Query Frame = 1
Query:    1 GEDVRLRPMFPELLRAMGKVEGIRRVRYTSPHPKDMTPDVYSAMAETPNVVPHLHFPLQSGSDRILAAMHRGYTAERYLEKLAEARSMIPDLAVSTDIIVGFPGETDADFERTLEVAAAAEYDSAYTFVYSPRPGTEAAEMVDDFCDPDVVKERYKALRTVIERSALAKYRARIGMVEEVIVEGPSKKDPNVLTGRTAQNKLVHFPAA-PLPQGAGRVGTYVTVRVSDAKHQYMLGDFVEVTHRATHRTKIPVLA 762
            GEDVR+RP+F +LLR++G VEGIRRVRYTSPHPKD+ P+  +AMAETP V  HLH P+QSGSDR+LAAMHRGYTAERYLEKLA AR+ I DLAV+TDIIVGFPGETD DFERTLE+AAAAEYDSAY F+YSPR GTEAAE+VD+F DP VV ER+  L+ V+ERSALAK+ ARIG VEEV+VEGPS++DP+VLTGRT QNKL+HF +  PL     RVGTY  V  + A   ++ GD V VT  A HRT+IPV A
Sbjct:  234 GEDVRVRPLFADLLRSVGAVEGIRRVRYTSPHPKDLRPETIAAMAETPEVCEHLHLPVQSGSDRVLAAMHRGYTAERYLEKLAAARAAIADLAVTTDIIVGFPGETDDDFERTLELAAAAEYDSAYQFIYSPRAGTEAAELVDEFVDPAVVAERFDRLKVVLERSALAKHEARIGRVEEVVVEGPSRRDPSVLTGRTRQNKLIHFSSEQPL-----RVGTYAEVLCTGAAPHFLRGDLVAVTAPARHRTRIPVSA 483          
BLAST of mRNA_M-pyrifera_M_contig75809.17881.1 vs. uniprot
Match: A0A7X7D3A4_9ACTN (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7X7D3A4_9ACTN)

HSP 1 Score: 340 bits (872), Expect = 3.210e-112
Identity = 171/250 (68.40%), Postives = 206/250 (82.40%), Query Frame = 1
Query:   10 VRLRPMFPELLRAMGKVEGIRRVRYTSPHPKDMTPDVYSAMAETPNVVPHLHFPLQSGSDRILAAMHRGYTAERYLEKLAEARSMIPDLAVSTDIIVGFPGETDADFERTLEVAAAAEYDSAYTFVYSPRPGTEAAEMVDDFCDPDVVKERYKALRTVIERSALAKYRARIGMVEEVIVEGPSKKDPNVLTGRTAQNKLVHFPAA-PLPQGAGRVGTYVTVRVSDAKHQYMLGDFVEVTHRATHRTKIPV 756
            VR+RP+F +LLR +G V+GIRRVRYTSPHPKD+ P+  +AMAETP V  HLH PLQSGS+R+LA MHRGYTAERYLEK+A AR+ +PDLA++TD+IVGFPGETD DF++TL VAAAAEYDSAYTF+YSPRPGTEAAEMVD F DP+VV +R+  L+ V+ERSALAK+ AR+G VEEV+VEGPS+KDP+VLTGRT QNKLVHF +A P+     R GTY  V V+ A   ++ GD V VT  ATHRT+IPV
Sbjct:  239 VRVRPLFADLLRRVGAVDGIRRVRYTSPHPKDLRPETIAAMAETPAVCEHLHLPLQSGSNRLLAVMHRGYTAERYLEKVAAARAAMPDLALTTDLIVGFPGETDDDFDQTLSVAAAAEYDSAYTFIYSPRPGTEAAEMVDLFVDPEVVADRFDRLKVVLERSALAKHEARVGRVEEVVVEGPSRKDPSVLTGRTRQNKLVHFASADPI-----RTGTYAEVLVTGAAPHFLRGDLVRVTATATHRTRIPV 483          
BLAST of mRNA_M-pyrifera_M_contig75809.17881.1 vs. uniprot
Match: A0A7Y2N8H1_9ACTN (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=2 Tax=Acidimicrobiia TaxID=84992 RepID=A0A7Y2N8H1_9ACTN)

HSP 1 Score: 339 bits (870), Expect = 3.830e-112
Identity = 169/251 (67.33%), Postives = 204/251 (81.27%), Query Frame = 1
Query:    7 DVRLRPMFPELLRAMGKVEGIRRVRYTSPHPKDMTPDVYSAMAETPNVVPHLHFPLQSGSDRILAAMHRGYTAERYLEKLAEARSMIPDLAVSTDIIVGFPGETDADFERTLEVAAAAEYDSAYTFVYSPRPGTEAAEMVDDFCDPDVVKERYKALRTVIERSALAKYRARIGMVEEVIVEGPSKKDPNVLTGRTAQNKLVHFPAAPLPQGAGRVGTYVTVRVSDAKHQYMLGDFVEVTHRATHRTKIPVL 759
            DV+LRP F  LLR++  VEGIRR+RYTSPHPKDMT DV+ AMA+TP V+PHLHFPLQSGS+ IL AMHRGYTA+RYLEKLAEAR  IPDLAV+TDIIVGFPGE++ DF+ T+ VAA A +D A+TFVYSPRPGTEAA++ D FCDP  VKER+  LRTVIER+ALA   AR+G+++EV+VEGPSK D + LTGRT QNKLVHFP    P G  R G+Y TV+V++    Y++G+ VE+T RATHRT+I VL
Sbjct:  222 DVKLRPAFANLLRSVAAVEGIRRLRYTSPHPKDMTTDVFEAMAQTPAVMPHLHFPLQSGSNAILKAMHRGYTAQRYLEKLAEARETIPDLAVTTDIIVGFPGESEEDFQATMAVAAEARFDHAFTFVYSPRPGTEAAQLSDVFCDPAEVKERFARLRTVIERNALAHNLARVGVIDEVMVEGPSKTDSDRLTGRTGQNKLVHFPK---PDGPLRAGSYATVKVTEGHTSYLVGELVEITARATHRTRIAVL 469          
BLAST of mRNA_M-pyrifera_M_contig75809.17881.1 vs. uniprot
Match: UPI0003473F4B (tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB n=1 Tax=Ilumatobacter nonamiensis TaxID=467093 RepID=UPI0003473F4B)

HSP 1 Score: 338 bits (866), Expect = 1.850e-111
Identity = 171/254 (67.32%), Postives = 202/254 (79.53%), Query Frame = 1
Query:    4 EDVRLRPMFPELLRAMGKVEGIRRVRYTSPHPKDMTPDVYSAMAETPNVVPHLHFPLQSGSDRILAAMHRGYTAERYLEKLAEARSMIPDLAVSTDIIVGFPGETDADFERTLEVAAAAEYDSAYTFVYSPRPGTEAAEMVDDFCDPDVVKERYKALRTVIERSALAKYRARIGMVEEVIVEGPSKKDPNVLTGRTAQNKLVHFPAAPLPQGAGRVGTYVTVRVSDAKHQYMLGDFVEVTHRATHRTKIPVLAL 765
            E  RLRP+F +LLR +G V+GIRRVRYTSPHPKDM P+ ++AMAET  V  HLH+PLQSGSDR+LA MHRGYTAERYLE+L +AR  IPDLAVSTDIIVGFPGETD DFERTLEVAAAAEYD AYTF++SPRPGTEAAEM  +F DP V  ER++ LR V+ERSA+AK++AR+G +EEV+VEGPSKKDP V +GRT QNKLVHF  AP P    R G+Y  V V+ A   +++GDFVE    A H  +IPV +L
Sbjct:  226 ESARLRPLFADLLRDVGAVDGIRRVRYTSPHPKDMRPETFAAMAETAAVCEHLHYPLQSGSDRVLALMHRGYTAERYLERLVDARRAIPDLAVSTDIIVGFPGETDDDFERTLEVAAAAEYDYAYTFIFSPRPGTEAAEMDAEFVDPAVASERFERLRVVVERSAIAKHQARVGRIEEVLVEGPSKKDPTVTSGRTRQNKLVHF-VAPRPM---RAGSYARVEVTRAAPHHLIGDFVEHVADARHTVRIPVASL 475          
BLAST of mRNA_M-pyrifera_M_contig75809.17881.1 vs. uniprot
Match: A0A6J4IIC2_9ACTN (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=1 Tax=uncultured Acidimicrobiales bacterium TaxID=310071 RepID=A0A6J4IIC2_9ACTN)

HSP 1 Score: 337 bits (863), Expect = 3.120e-111
Identity = 168/256 (65.62%), Postives = 204/256 (79.69%), Query Frame = 1
Query:    1 GEDV-RLRPMFPELLRAMGKVEGIRRVRYTSPHPKDMTPDVYSAMAETPNVVPHLHFPLQSGSDRILAAMHRGYTAERYLEKLAEARSMIPDLAVSTDIIVGFPGETDADFERTLEVAAAAEYDSAYTFVYSPRPGTEAAEMVDDFCDPDVVKERYKALRTVIERSALAKYRARIGMVEEVIVEGPSKKDPNVLTGRTAQNKLVHFPAAPLPQGAGRVGTYVTVRVSDAKHQYMLGDFVEVTHRATHRTKIPVLAL 765
            G D+ R RP+F ELLRA+G+VEGIRRVRYTSPHPKD+ P+  +AMAE P V  HLH+PLQSGSDRILAAMHRGYTA+RYLEKL  AR  +P LAV+TDIIVGFPGETDADFERTLEV A AEYDSAYTFV+SPRPGTEAAE+ D F   +V+ ER+  L+ V+ERSALA++  R+G+ EEV+VEGPS+KDP VL GRT QNKL+HFP+APL  G     T+  VRV+ A   +++G+ + VT +  HRT IPV+A+
Sbjct:  208 GRDLTRRRPLFSELLRAVGEVEGIRRVRYTSPHPKDLRPETIAAMAEVPTVCEHLHYPLQSGSDRILAAMHRGYTAQRYLEKLVSARQAVPGLAVTTDIIVGFPGETDADFERTLEVVAEAEYDSAYTFVFSPRPGTEAAELTDRFVPAEVIAERFARLKVVVERSALARHERRVGLTEEVLVEGPSRKDPAVLAGRTRQNKLIHFPSAPLAPG-----TFADVRVTRAAPHHLMGELLAVTAKPRHRTMIPVVAV 458          
BLAST of mRNA_M-pyrifera_M_contig75809.17881.1 vs. uniprot
Match: A0A7Y1ZUY3_9ACTN (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A7Y1ZUY3_9ACTN)

HSP 1 Score: 337 bits (864), Expect = 3.940e-111
Identity = 169/254 (66.54%), Postives = 202/254 (79.53%), Query Frame = 1
Query:    4 EDVRLRPMFPELLRAMGKVEGIRRVRYTSPHPKDMTPDVYSAMAETPNVVPHLHFPLQSGSDRILAAMHRGYTAERYLEKLAEARSMIPDLAVSTDIIVGFPGETDADFERTLEVAAAAEYDSAYTFVYSPRPGTEAAEMVDDFCDPDVVKERYKALRTVIERSALAKYRARIGMVEEVIVEGPSKKDPNVLTGRTAQNKLVHF-PAAPLPQGAGRVGTYVTVRVSDAKHQYMLGDFVEVTHRATHRTKIPVLA 762
            E  +LRP+F +LLR +G V+GIRRVR+TSPHPKDM PD ++AMAETP V  HLH+PLQSGSDR+LA MHRGY+AERYLE+L++AR  I DLAVSTDIIVGFPGETD DF  TL+VAAAAE+DSAYTF++SPRPGTEAA M  DF DP V  ER++ LR V+ERSAL K+ AR+G +EEV+VEGPSK+DP V+TGRT QNKLVHF P  PL     R G+Y TVRV+ A   Y+ GDFVE+    TH+ +IPV A
Sbjct:  228 ESAKLRPLFSDLLRDVGAVDGIRRVRFTSPHPKDMRPDTFAAMAETPAVCEHLHYPLQSGSDRVLALMHRGYSAERYLERLSQAREAIDDLAVSTDIIVGFPGETDDDFADTLDVAAAAEFDSAYTFIFSPRPGTEAAGMEADFVDPQVAGERFQRLRVVVERSALRKHEARLGRIEEVLVEGPSKRDPGVVTGRTRQNKLVHFTPPRPL-----RTGSYATVRVTRAAPHYLAGDFVEIVSEPTHKLRIPVAA 476          
BLAST of mRNA_M-pyrifera_M_contig75809.17881.1 vs. uniprot
Match: A0A2D6L1B2_9ACTN (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=7 Tax=Actinobacteria TaxID=201174 RepID=A0A2D6L1B2_9ACTN)

HSP 1 Score: 336 bits (862), Expect = 7.440e-111
Identity = 167/255 (65.49%), Postives = 206/255 (80.78%), Query Frame = 1
Query:    4 EDVRLRPMFPELLRAMGKVEGIRRVRYTSPHPKDMTPDVYSAMAETPNVVPHLHFPLQSGSDRILAAMHRGYTAERYLEKLAEARSMIPDLAVSTDIIVGFPGETDADFERTLEVAAAAEYDSAYTFVYSPRPGTEAAEMVDDFCDPDVVKERYKALRTVIERSALAKYRARIGMVEEVIVEGPSKKDPNVLTGRTAQNKLVHF-PAAPLPQGAGRVGTYVTVRVSDAKHQYMLGDFVEVTHRATHRTKIPVLAL 765
            ++ RLRP+F +LL A+G V+GIRRVR+TSPHPKDM P+ ++AMA++P V  HLH+PLQSGSDR+LA MHRGYTA+RYLE+LA+AR  IPDLAVSTDIIVGFPGET+ADFE+TLEV AAA YD AYTF++SPRPGTEAA++  DF DP V  ER++ LR V+ERSAL ++ AR+GMVEEV+VEGPSKKDP+VL GRT QNKLVHF P  PL     R G+Y TV ++     ++LG+FVE+    THR +IPV AL
Sbjct:  226 DEARLRPLFADLLTAVGNVDGIRRVRFTSPHPKDMRPETFAAMAQSPAVCEHLHYPLQSGSDRVLALMHRGYTADRYLERLADARRHIPDLAVSTDIIVGFPGETEADFEQTLEVTAAAGYDFAYTFIFSPRPGTEAADLEADFVDPAVAGERFERLRAVVERSALQRHEARVGMVEEVLVEGPSKKDPSVLAGRTRQNKLVHFTPPTPL-----RTGSYATVEITHGAPHHLLGNFVELVAEPTHRRRIPVEAL 475          
BLAST of mRNA_M-pyrifera_M_contig75809.17881.1 vs. uniprot
Match: A0A6N2DIY9_9ACTN (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A6N2DIY9_9ACTN)

HSP 1 Score: 334 bits (856), Expect = 3.680e-110
Identity = 167/251 (66.53%), Postives = 202/251 (80.48%), Query Frame = 1
Query:   13 RLRPMFPELLRAMGKVEGIRRVRYTSPHPKDMTPDVYSAMAETPNVVPHLHFPLQSGSDRILAAMHRGYTAERYLEKLAEARSMIPDLAVSTDIIVGFPGETDADFERTLEVAAAAEYDSAYTFVYSPRPGTEAAEMVDDFCDPDVVKERYKALRTVIERSALAKYRARIGMVEEVIVEGPSKKDPNVLTGRTAQNKLVHF-PAAPLPQGAGRVGTYVTVRVSDAKHQYMLGDFVEVTHRATHRTKIPVLA 762
            +LRP+F +LLR +G V+GIRRVR+TSPHPKDM P+ + AMA+T  V  HLH+PLQ+GSDR+LAAMHRGYTAERYLE+LAEAR ++PDLAVSTDIIVGFPGETD DFERTLEVAAAAE+DSAYTF++SPRPGTEAA M D+F DP V  ER++ LR V+ERS+L K+ AR+G VEEV+VEGPSKKDP V +GRT QNKLVHF P  PL     R G+Y TV V+     +++G FV++     HRT+IPV A
Sbjct:  213 KLRPLFADLLRHVGAVDGIRRVRFTSPHPKDMRPETFGAMADTSAVCEHLHYPLQAGSDRVLAAMHRGYTAERYLERLAEARRLVPDLAVSTDIIVGFPGETDDDFERTLEVAAAAEFDSAYTFIFSPRPGTEAAGMEDEFVDPAVAGERFQRLRVVVERSSLLKHEARVGRVEEVLVEGPSKKDPTVTSGRTRQNKLVHFTPPRPL-----RAGSYATVEVTYGAPHHLIGRFVDLVAEPNHRTRIPVAA 458          
BLAST of mRNA_M-pyrifera_M_contig75809.17881.1 vs. uniprot
Match: A0A351ERJ5_9ACTN (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A351ERJ5_9ACTN)

HSP 1 Score: 333 bits (855), Expect = 7.750e-110
Identity = 169/255 (66.27%), Postives = 203/255 (79.61%), Query Frame = 1
Query:    1 GEDVRLRPMFPELLRAMGKVEGIRRVRYTSPHPKDMTPDVYSAMAETPNVVPHLHFPLQSGSDRILAAMHRGYTAERYLEKLAEARSMIPDLAVSTDIIVGFPGETDADFERTLEVAAAAEYDSAYTFVYSPRPGTEAAEMVDDFCDPDVVKERYKALRTVIERSALAKYRARIGMVEEVIVEGPSKKDPNVLTGRTAQNKLVHFPAA-PLPQGAGRVGTYVTVRVSDAKHQYMLGDFVEVTHRATHRTKIPVLA 762
            GEDVRLRPMF +LLR +G ++GI+R+RYTSPHPKDM  DV  AMAET  V  HLH PLQSGSDR+L+ MHRGY AERYL  + +AR+ IPDLAV+TDIIVGFPGET+ADFERTLEVAA  +YDSAYTFV+SPRPGTEAA+M  DFCDP  V +RY+ LR VIERSA  ++ ARIG  EEV+VEG SK+D +VLTGRT QNKL+HFP A P+     + G+Y TV+V+DA  QY++G+ VEVT     RT+IPV+A
Sbjct:  222 GEDVRLRPMFAKLLRTIGDIDGIQRIRYTSPHPKDMQLDVAEAMAETAAVCEHLHMPLQSGSDRVLSLMHRGYNAERYLRVIEQARATIPDLAVTTDIIVGFPGETEADFERTLEVAAEVKYDSAYTFVFSPRPGTEAADMEADFCDPAEVTDRYERLRVVIERSARQRHAARIGKTEEVVVEGTSKRDDSVLTGRTRQNKLIHFPTANPI-----KAGSYATVKVTDAGMQYLMGELVEVTATPKRRTRIPVVA 471          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig75809.17881.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Y2DNM7_9ACTN1.060e-12474.80tRNA-2-methylthio-N(6)-dimethylallyladenosine synt... [more]
A0A8F4FV63_9ACTN5.760e-11569.80tRNA-2-methylthio-N(6)-dimethylallyladenosine synt... [more]
A0A7X7D3A4_9ACTN3.210e-11268.40tRNA-2-methylthio-N(6)-dimethylallyladenosine synt... [more]
A0A7Y2N8H1_9ACTN3.830e-11267.33tRNA-2-methylthio-N(6)-dimethylallyladenosine synt... [more]
UPI0003473F4B1.850e-11167.32tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiot... [more]
A0A6J4IIC2_9ACTN3.120e-11165.63tRNA-2-methylthio-N(6)-dimethylallyladenosine synt... [more]
A0A7Y1ZUY3_9ACTN3.940e-11166.54tRNA-2-methylthio-N(6)-dimethylallyladenosine synt... [more]
A0A2D6L1B2_9ACTN7.440e-11165.49tRNA-2-methylthio-N(6)-dimethylallyladenosine synt... [more]
A0A6N2DIY9_9ACTN3.680e-11066.53tRNA-2-methylthio-N(6)-dimethylallyladenosine synt... [more]
A0A351ERJ5_9ACTN7.750e-11066.27tRNA-2-methylthio-N(6)-dimethylallyladenosine synt... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig75809contigM-pyrifera_M_contig75809:2..772 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score327.8
Seed ortholog evalue4.4e-87
Seed eggNOG ortholog1313172.YM304_27040
Preferred namemiaB
KEGG rclassRC00003,RC00980,RC03221,RC03222
KEGG koko:K06168
KEGG ReactionR10645,R10646,R10647
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
EggNOG OGs2GJEV@201174,4CMWG@84992,COG0621@1,COG0621@2
EC2.8.4.3
COG Functional cat.J
Best tax levelAcidimicrobiia
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03016
Exons1
Model size771
Cds size747
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816656.5918593-UTR-M-pyrifera_M_contig75809:1..251622816656.5918593-UTR-M-pyrifera_M_contig75809:1..25Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig75809 2..25 +
1692278102.1039035-UTR-M-pyrifera_M_contig75809:1..251692278102.1039035-UTR-M-pyrifera_M_contig75809:1..25Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig75809 2..25 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816656.6030385-CDS-M-pyrifera_M_contig75809:25..7721622816656.6030385-CDS-M-pyrifera_M_contig75809:25..772Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig75809 26..772 +
1692278102.114855-CDS-M-pyrifera_M_contig75809:25..7721692278102.114855-CDS-M-pyrifera_M_contig75809:25..772Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig75809 26..772 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig75809.17881.1prot_M-pyrifera_M_contig75809.17881.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig75809 26..772 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig75809.17881.1

>prot_M-pyrifera_M_contig75809.17881.1 ID=prot_M-pyrifera_M_contig75809.17881.1|Name=mRNA_M-pyrifera_M_contig75809.17881.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=249bp
MFPELLRAMGKVEGIRRVRYTSPHPKDMTPDVYSAMAETPNVVPHLHFPL
QSGSDRILAAMHRGYTAERYLEKLAEARSMIPDLAVSTDIIVGFPGETDA
DFERTLEVAAAAEYDSAYTFVYSPRPGTEAAEMVDDFCDPDVVKERYKAL
RTVIERSALAKYRARIGMVEEVIVEGPSKKDPNVLTGRTAQNKLVHFPAA
PLPQGAGRVGTYVTVRVSDAKHQYMLGDFVEVTHRATHRTKIPVLALD*
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mRNA from alignment at M-pyrifera_M_contig75809:2..772+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig75809.17881.1 ID=mRNA_M-pyrifera_M_contig75809.17881.1|Name=mRNA_M-pyrifera_M_contig75809.17881.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=771bp|location=Sequence derived from alignment at M-pyrifera_M_contig75809:2..772+ (Macrocystis pyrifera P11B4 male)
GGCGAAGACGTCCGCCTCCGGCCGATGTTCCCGGAGCTGCTCCGGGCGAT GGGCAAGGTCGAGGGCATCCGGCGGGTCCGCTACACCAGCCCGCACCCCA AAGACATGACGCCCGACGTCTACTCCGCCATGGCCGAGACGCCCAACGTC GTCCCGCACCTGCACTTCCCGCTCCAGTCCGGTTCCGACCGGATCCTGGC CGCCATGCACCGTGGGTACACCGCCGAGCGGTATCTCGAGAAGCTGGCAG AGGCCCGCTCGATGATCCCCGACCTCGCGGTCAGCACCGACATCATCGTC GGCTTCCCCGGCGAGACCGACGCCGACTTCGAGCGCACGCTCGAAGTCGC TGCCGCGGCCGAGTACGACTCCGCCTACACCTTCGTGTACTCGCCTCGTC CCGGCACCGAAGCGGCCGAGATGGTCGACGACTTCTGCGATCCCGACGTG GTCAAGGAGCGATACAAGGCCCTTCGCACCGTGATCGAACGGTCGGCGCT GGCCAAGTATCGGGCTCGCATCGGCATGGTCGAAGAAGTGATCGTCGAGG GCCCGTCGAAGAAAGACCCCAACGTGCTCACCGGACGAACTGCTCAGAAC AAGCTGGTGCACTTCCCGGCTGCACCGCTCCCGCAAGGAGCGGGCCGGGT CGGCACCTATGTCACCGTGCGAGTCTCCGATGCCAAGCATCAGTACATGC TCGGCGACTTCGTCGAGGTGACACACCGAGCCACCCACCGCACCAAGATC CCGGTGCTTGCACTCGACTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig75809:2..772+

>mRNA_M-pyrifera_M_contig75809.17881.1 ID=mRNA_M-pyrifera_M_contig75809.17881.1|Name=mRNA_M-pyrifera_M_contig75809.17881.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1494bp|location=Sequence derived from alignment at M-pyrifera_M_contig75809:2..772+ (Macrocystis pyrifera P11B4 male)
ATGTTCCCGGAGCTGCTCCGGGCGATGGGCAAGGTCGAGGGCATCCGGCG
GGTCCGCTACACCAGCCCGCACCCCAAAGACATGACGCCCGACGTCTACT
CCGCCATGGCCGAGACGCCCAACGTCGTCCCGCACCTGCACTTCCCGCTC
CAGTCCGGTTCCGACCGGATCCTGGCCGCCATGCACCGTGGGTACACCGC
CGAGCGGTATCTCGAGAAGCTGGCAGAGGCCCGCTCGATGATCCCCGACC
TCGCGGTCAGCACCGACATCATCGTCGGCTTCCCCGGCGAGACCGACGCC
GACTTCGAGCGCACGCTCGAAGTCGCTGCCGCGGCCGAGTACGACTCCGC
CTACACCTTCGTGTACTCGCCTCGTCCCGGCACCGAAGCGGCCGAGATGG
TCGACGACTTCTGCGATCCCGACGTGGTCAAGGAGCGATACAAGGCCCTT
CGCACCGTGATCGAACGGTCGGCGCTGGCCAAGTATCGGGCTCGCATCGG
CATGGTCGAAGAAGTGATCGTCGAGGGCCCGTCGAAGAAAGACCCCAACG
TGCTCACCGGACGAACTGCTCAGAACAAGCTGGTGCACTTCCCGGCTGCA
CCGCTCCCGCAAGGAGCGGGCCGGGTCGGCACCTATGTCACCGTGCGAGT
CTCCGATGCCAAGCATCAGTACATGCTCGGCGACTTCGTCGAGGTGACAC
ACCGAGCCACCCACCGCACCAAGATCCCGGTGCTTGCACTCGACTGAATG
TTCCCGGAGCTGCTCCGGGCGATGGGCAAGGTCGAGGGCATCCGGCGGGT
CCGCTACACCAGCCCGCACCCCAAAGACATGACGCCCGACGTCTACTCCG
CCATGGCCGAGACGCCCAACGTCGTCCCGCACCTGCACTTCCCGCTCCAG
TCCGGTTCCGACCGGATCCTGGCCGCCATGCACCGTGGGTACACCGCCGA
GCGGTATCTCGAGAAGCTGGCAGAGGCCCGCTCGATGATCCCCGACCTCG
CGGTCAGCACCGACATCATCGTCGGCTTCCCCGGCGAGACCGACGCCGAC
TTCGAGCGCACGCTCGAAGTCGCTGCCGCGGCCGAGTACGACTCCGCCTA
CACCTTCGTGTACTCGCCTCGTCCCGGCACCGAAGCGGCCGAGATGGTCG
ACGACTTCTGCGATCCCGACGTGGTCAAGGAGCGATACAAGGCCCTTCGC
ACCGTGATCGAACGGTCGGCGCTGGCCAAGTATCGGGCTCGCATCGGCAT
GGTCGAAGAAGTGATCGTCGAGGGCCCGTCGAAGAAAGACCCCAACGTGC
TCACCGGACGAACTGCTCAGAACAAGCTGGTGCACTTCCCGGCTGCACCG
CTCCCGCAAGGAGCGGGCCGGGTCGGCACCTATGTCACCGTGCGAGTCTC
CGATGCCAAGCATCAGTACATGCTCGGCGACTTCGTCGAGGTGACACACC
GAGCCACCCACCGCACCAAGATCCCGGTGCTTGCACTCGACTGA
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