prot_M-pyrifera_M_contig7580.17879.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig7580.17879.1
Unique Nameprot_M-pyrifera_M_contig7580.17879.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length344
Homology
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BLAST of mRNA_M-pyrifera_M_contig7580.17879.1 vs. uniprot
Match: A0A6H5L7V8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7V8_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 3.420e-6
Identity = 58/102 (56.86%), Postives = 67/102 (65.69%), Query Frame = 0 
Query:  242 GAAVAAADGTAPADDAKTRRANRLKRARLMTGHYKLAVMEHSSGQENAADGXXXXXXXXXXXVVLGETASGVGPGPSHDGGVGGSDASSSAGGLSDFDEESS 343
            GA  +AA+G   ADD +TRRANRLKR RLM+GHYKLAV+EHSS Q++ +  XXXXXXXXXXX                DG  GG+D  SSA GLSD D  SS
Sbjct:  702 GAPSSAAEG-GRADDEETRRANRLKRMRLMSGHYKLAVLEHSSEQQHESAXXXXXXXXXXXXXXXXXXXXXX-----XDGDCGGTDDHSSADGLSDLDYTSS 797
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7580.17879.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L7V8_9PHAE3.420e-656.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7580contigM-pyrifera_M_contig7580:2961..3992 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7580.17879.1mRNA_M-pyrifera_M_contig7580.17879.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig7580 2961..3992 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig7580.17879.1 ID=prot_M-pyrifera_M_contig7580.17879.1|Name=mRNA_M-pyrifera_M_contig7580.17879.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=344bp
GATATAAAAGPNDPTVSAGGASEIARSTGGGVRDAPGGRATSSPSPPPHT
RQHSVPTSAGAAGANPGAPEDFHQGVVGKSGEASGAVTEGEGGGVFEGNG
DRRDLPARPEIHEMGLDERLADHYAGGASSGGITASNGRTAAAAAAAEDD
GLSRVGGRGANAASTGRSSRNSVAAALGTSTELPFGASGEGVGDGGEGST
ARSYSSSSEDGGGSGGAAAGGDEGGLMMRGVSVSLPLTGLDGAAVAAADG
TAPADDAKTRRANRLKRARLMTGHYKLAVMEHSSGQENAADGGQQQQEQQ
QGGVVLGETASGVGPGPSHDGGVGGSDASSSAGGLSDFDEESSG
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