mRNA_M-pyrifera_M_contig75689.17851.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig75689.17851.1 vs. uniprot
Match: A0A1E3HLF6_9TREE (Conserved oligomeric Golgi complex subunit 6 n=4 Tax=Cryptococcus TaxID=5206 RepID=A0A1E3HLF6_9TREE) HSP 1 Score: 58.2 bits (139), Expect = 3.930e-8 Identity = 34/74 (45.95%), Postives = 45/74 (60.81%), Query Frame = 1 Query: 1 RYVGDILAWVHQAVAMEKELATALFGSGPGSGVAGQDLVSGQAEGGEGGGGGLMSAEEVLGKVLQGIARPLQVR 222 RYVGD+LAWVHQ A E E +FG G + GQ+ G+ +G E G A EVL K L+G++RPL++R Sbjct: 331 RYVGDMLAWVHQTTASEGEFLDGVFGVSRGKRMVGQERTRGERDGEEKGE--EKMAREVLDKNLEGLSRPLKLR 402
BLAST of mRNA_M-pyrifera_M_contig75689.17851.1 vs. uniprot
Match: A0A5J4Y8M6_9CHLO (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y8M6_9CHLO) HSP 1 Score: 54.3 bits (129), Expect = 8.920e-7 Identity = 31/74 (41.89%), Postives = 44/74 (59.46%), Query Frame = 1 Query: 1 RYVGDILAWVHQAVAMEKELATALFGSGPGSGVAGQDLVSGQAEGGEGGGGGLMSAEEVLGKVLQGIARPLQVR 222 RY+GD+LAWVHQA+A E+EL +LFG S +G S + S+ +L KVL+G+ RPL++R Sbjct: 280 RYLGDMLAWVHQALASERELLISLFGQDNQSRTSGSHADSPSD---------VPSSSALLDKVLEGVCRPLKIR 344
BLAST of mRNA_M-pyrifera_M_contig75689.17851.1 vs. uniprot
Match: A0A427YUY4_9TREE (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Saitozyma podzolica TaxID=1890683 RepID=A0A427YUY4_9TREE) HSP 1 Score: 54.3 bits (129), Expect = 8.990e-7 Identity = 32/74 (43.24%), Postives = 45/74 (60.81%), Query Frame = 1 Query: 1 RYVGDILAWVHQAVAMEKELATALFGSGPGSGVAGQDLVSGQAEGGEGGGGGLMSAEEVLGKVLQGIARPLQVR 222 RYVGD+LAWVHQ A E E +LFG GPG + GQ + + GL+ ++ L K L+G++RPL++R Sbjct: 359 RYVGDMLAWVHQTTASEHEFLQSLFGVGPGRRMVGQPRSAEE---------GLV--KDALDKDLEGLSRPLKLR 421
BLAST of mRNA_M-pyrifera_M_contig75689.17851.1 vs. uniprot
Match: A0A7S3BC43_9VIRI (Conserved oligomeric Golgi complex subunit 6 (Fragment) n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BC43_9VIRI) HSP 1 Score: 53.9 bits (128), Expect = 1.200e-6 Identity = 34/77 (44.16%), Postives = 46/77 (59.74%), Query Frame = 1 Query: 1 RYVGDILAWVHQAVAMEKELATALFGSGPGSGVAGQDLVSGQAEGGEGGGGG---LMSAEEVLGKVLQGIARPLQVR 222 RYVGD+ W+HQA+A E ELATALFG VA ++ +G + G G +SA EVL +V +G+ RP + R Sbjct: 302 RYVGDMCGWLHQAMAEEHELATALFGE-----VAEREADTGASNGNGAAAEGDEEEVSAAEVLDRVFEGVCRPFKAR 373
BLAST of mRNA_M-pyrifera_M_contig75689.17851.1 vs. uniprot
Match: A0A5C3EZF5_9BASI (Conserved oligomeric Golgi complex subunit 6 n=2 Tax=Pseudozyma flocculosa TaxID=84751 RepID=A0A5C3EZF5_9BASI) HSP 1 Score: 53.5 bits (127), Expect = 1.680e-6 Identity = 36/88 (40.91%), Postives = 46/88 (52.27%), Query Frame = 1 Query: 1 RYVGDILAWVHQAVAMEKELATALFGSGPGSG----------VAGQDLVSGQAEGGEGG----GGGLMSAEEVLGKVLQGIARPLQVR 222 RYVGD+LAW+HQ +A E+E TALFG G G + G +S GG G G G EVL + L+G RPL++R Sbjct: 350 RYVGDMLAWIHQTLASEREFLTALFGEKEGEGGRRIGQRRRGLEGSVDLSASLSGGAGDAAAMGPGEALVREVLNRNLEGCCRPLKIR 437
BLAST of mRNA_M-pyrifera_M_contig75689.17851.1 vs. uniprot
Match: A0A1E3IA47_9TREE (Conserved oligomeric Golgi complex subunit 6 n=2 Tax=Cryptococcus depauperatus TaxID=5208 RepID=A0A1E3IA47_9TREE) HSP 1 Score: 53.1 bits (126), Expect = 2.290e-6 Identity = 32/74 (43.24%), Postives = 41/74 (55.41%), Query Frame = 1 Query: 1 RYVGDILAWVHQAVAMEKELATALFGSGPGSGVAGQDLVSGQAEGGEGGGGGLMSAEEVLGKVLQGIARPLQVR 222 RYVGD+LAWVHQA A E E +LFG G GQ+ E A+E L K+L+G++RPL+ R Sbjct: 339 RYVGDMLAWVHQATASENEFLESLFGLGQKGRWVGQERKEAVGEEEN-------LAKEALDKILEGLSRPLKSR 405
BLAST of mRNA_M-pyrifera_M_contig75689.17851.1 vs. uniprot
Match: A0A8H3YDD6_9TREE (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Naganishia liquefaciens TaxID=104408 RepID=A0A8H3YDD6_9TREE) HSP 1 Score: 52.8 bits (125), Expect = 3.150e-6 Identity = 39/85 (45.88%), Postives = 47/85 (55.29%), Query Frame = 1 Query: 1 RYVGDILAWVHQAVAMEKELATALFGSGPGSGVAGQDLVS------GQAEGGEGGGGGLMSAEEVLG-----KVLQGIARPLQVR 222 RYVGD+LAWVHQA A E+E ALF D+ S G+A G +GG S EEVL K L+G+ARPL+VR Sbjct: 494 RYVGDMLAWVHQATAGEREFLDALF-----------DVTSYRRRMVGEARGTQGG---EASEEEVLARTCLDKALEGLARPLKVR 564
BLAST of mRNA_M-pyrifera_M_contig75689.17851.1 vs. uniprot
Match: A0A2V0P5U2_9CHLO (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P5U2_9CHLO) HSP 1 Score: 52.4 bits (124), Expect = 4.280e-6 Identity = 34/84 (40.48%), Postives = 45/84 (53.57%), Query Frame = 1 Query: 1 RYVGDILAWVHQAVAMEKELATALFGSGPGSGVAGQDLVSGQAE-------GGEGGGGG---LMSAEEVLGKVLQGIARPLQVR 222 RYV D++AW HQA+A E+E ALFG G G GQ GG G G G +S+ +L ++ +GI RPL+VR Sbjct: 277 RYVADMMAWAHQALAGEREFVAALFGEGDPDGERGQGXXXXXXXXXXXXXXGGAGAGVGPADALSSAALLDRIFEGICRPLRVR 360
BLAST of mRNA_M-pyrifera_M_contig75689.17851.1 vs. uniprot
Match: Q00T18_OSTTA (Conserved oligomeric Golgi complex subunit 6 n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=Q00T18_OSTTA) HSP 1 Score: 51.6 bits (122), Expect = 8.020e-6 Identity = 30/74 (40.54%), Postives = 42/74 (56.76%), Query Frame = 1 Query: 1 RYVGDILAWVHQAVAMEKELATALFGSGPGSGVAGQDLVSGQAEGGEGGGGGLMSAEEVLGKVLQGIARPLQVR 222 RYVGD+L+WVH AVA E+E A+FG + +D+ G+ A+E+LGKV + RPL+VR Sbjct: 344 RYVGDMLSWVHAAVASEREFCDAVFGDD--GQASDRDVSEGELA--------FDPAKELLGKVFDAVCRPLKVR 407
BLAST of mRNA_M-pyrifera_M_contig75689.17851.1 vs. uniprot
Match: COG6_CRYNJ (Conserved oligomeric Golgi complex subunit 6 n=8 Tax=Cryptococcus TaxID=5206 RepID=COG6_CRYNJ) HSP 1 Score: 51.6 bits (122), Expect = 8.020e-6 Identity = 35/74 (47.30%), Postives = 43/74 (58.11%), Query Frame = 1 Query: 1 RYVGDILAWVHQAVAMEKELATALFGSGPGSGVAGQDLVSGQAEGGEGGGGGLMSAEEVLGKVLQGIARPLQVR 222 RYVGD+LAWVHQ A E E +FG V + GQ GGE G M A EVL K L+G++RPL++R Sbjct: 322 RYVGDMLAWVHQTTATEHEFLEGMFG------VKEKKRWVGQERGGEEGEEERM-ASEVLDKDLEGLSRPLKLR 388 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig75689.17851.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig75689.17851.1 >prot_M-pyrifera_M_contig75689.17851.1 ID=prot_M-pyrifera_M_contig75689.17851.1|Name=mRNA_M-pyrifera_M_contig75689.17851.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=74bp RYVGDILAWVHQAVAMEKELATALFGSGPGSGVAGQDLVSGQAEGGEGGGback to top mRNA from alignment at M-pyrifera_M_contig75689:412..681+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig75689.17851.1 ID=mRNA_M-pyrifera_M_contig75689.17851.1|Name=mRNA_M-pyrifera_M_contig75689.17851.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=270bp|location=Sequence derived from alignment at M-pyrifera_M_contig75689:412..681+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig75689:412..681+ >mRNA_M-pyrifera_M_contig75689.17851.1 ID=mRNA_M-pyrifera_M_contig75689.17851.1|Name=mRNA_M-pyrifera_M_contig75689.17851.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=444bp|location=Sequence derived from alignment at M-pyrifera_M_contig75689:412..681+ (Macrocystis pyrifera P11B4 male)back to top |