prot_M-pyrifera_M_contig7566.17848.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig7566.17848.1
Unique Nameprot_M-pyrifera_M_contig7566.17848.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length186
Homology
BLAST of mRNA_M-pyrifera_M_contig7566.17848.1 vs. uniprot
Match: A0A6H5KM82_9PHAE (Golgi apparatus membrane protein TVP23 homolog n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM82_9PHAE)

HSP 1 Score: 292 bits (747), Expect = 4.110e-96
Identity = 148/168 (88.10%), Postives = 159/168 (94.64%), Query Frame = 0
Query:    1 MGGFKFVSSSSILTYIICILMLAFDFWTVKNVSGRLMVGLRWWSNVKEDGSTEWVFESLEDMSEISSADYKLFWIGLYATPVLWIGLLITGIMLLKFQWLVIVVVALLLSGANIYGYTKCNADAKNKVQQTMANGMMAGAMQGAQAALGNVGLRNALFSVFGGDQTQQ 168
            MG FKFVSSSS++TYIICILMLAFDFWTVKNVSGRLMVGLRWWSNV  DG+TEWVFESLEDMSEI+SADYKLFWIGLY TPVLW+ LL+TGIMLLKFQWLVIVV+ALLLSGANIYGYTKCNAD+K KVQQ + +GMMAGAMQGAQAALGNVGLRNALFS+FGGDQ QQ
Sbjct:  181 MGNFKFVSSSSVMTYIICILMLAFDFWTVKNVSGRLMVGLRWWSNVTADGTTEWVFESLEDMSEINSADYKLFWIGLYGTPVLWVCLLVTGIMLLKFQWLVIVVIALLLSGANIYGYTKCNADSKVKVQQMVNDGMMAGAMQGAQAALGNVGLRNALFSMFGGDQAQQ 348          
BLAST of mRNA_M-pyrifera_M_contig7566.17848.1 vs. uniprot
Match: D7FV24_ECTSI (Golgi apparatus membrane protein TVP23 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV24_ECTSI)

HSP 1 Score: 285 bits (728), Expect = 1.790e-95
Identity = 151/191 (79.06%), Postives = 161/191 (84.29%), Query Frame = 0
Query:    1 MGGFKFVSSSSILTYIICILMLAFDFWTVKNVSGRLM-----------------------VGLRWWSNVKEDGSTEWVFESLEDMSEISSADYKLFWIGLYATPVLWIGLLITGIMLLKFQWLVIVVVALLLSGANIYGYTKCNADAKNKVQQTMANGMMAGAMQGAQAALGNVGLRNALFSVFGGDQTQQ 168
            MG FKFVSSSS++TYIICILMLAFDFWTVKNVSGRLM                       VGLRWWSNVKEDG+TEWVFESLEDMSEI+SADYKLFWIGLY TPVLW+ LL+TGIMLLKFQWLVIVV+ALLLSGANIYGYTKCNADAK KVQQ + +GMMAGAMQGAQAALGNVGLRNALFS+FGGDQ QQ
Sbjct:    1 MGNFKFVSSSSVMTYIICILMLAFDFWTVKNVSGRLMRPGGVGGGWVGIETSRVESNAVQVGLRWWSNVKEDGTTEWVFESLEDMSEINSADYKLFWIGLYGTPVLWVCLLVTGIMLLKFQWLVIVVIALLLSGANIYGYTKCNADAKVKVQQMVNDGMMAGAMQGAQAALGNVGLRNALFSMFGGDQAQQ 191          
BLAST of mRNA_M-pyrifera_M_contig7566.17848.1 vs. uniprot
Match: A0A835Z0U0_9STRA (Golgi apparatus membrane protein TVP23 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0U0_9STRA)

HSP 1 Score: 193 bits (490), Expect = 7.860e-59
Identity = 99/157 (63.06%), Postives = 119/157 (75.80%), Query Frame = 0
Query:    7 VSSSSILTYIICILMLAFDFWTVKNVSGRLMVGLRWWSNVKEDGSTEWVFESLEDMSEISSADYKLFWIGLYATPVLWIGLLITGIMLLKFQWLVIVVVALLLSGANIYGYTKCNADAKNKVQQTMANGMMAGAMQGAQAALGNVGLRNALFSVFGG 163
            +SS+ +L  +  IL+LAFDFWTVKN++GRLMVGLRWWSNVKEDG+T WVFESLE+MSEI  AD KLFWIGLYA P +W+ L I G++    QWL+IVVVA+LLS ANI GYTKC+ DAKNKV+  M +G M        AA+GN G RN +FSV  G
Sbjct:   80 ISSNFVLICVATILLLAFDFWTVKNITGRLMVGLRWWSNVKEDGTTSWVFESLENMSEIQPADSKLFWIGLYAAPAVWVALFIIGLLKFNLQWLIIVVVAILLSTANIVGYTKCSNDAKNKVRNFMQDGAM--------AAMGNAGFRNMMFSVLTG 228          
BLAST of mRNA_M-pyrifera_M_contig7566.17848.1 vs. uniprot
Match: A0A7S2V0N0_9STRA (Golgi apparatus membrane protein TVP23 homolog n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0N0_9STRA)

HSP 1 Score: 182 bits (462), Expect = 4.960e-55
Identity = 89/156 (57.05%), Postives = 121/156 (77.56%), Query Frame = 0
Query:    8 SSSSILTYIICILMLAFDFWTVKNVSGRLMVGLRWWSNVKEDGSTEWVFESLEDMSEISSADYKLFWIGLYATPVLWIGLLITGIMLLKFQWLVIVVVALLLSGANIYGYTKCNADAKNKVQQTMANGMMAGAMQGAQAALGNVGLRNALFSVFGG 163
            SS+ +  +++C+L LAFDFWTVKNVSGRL+VGLRWW+NVKEDG+TEW FESLEDM+E+SSAD +LFW+G+Y  P+ W+ + I  ++ L FQWL+IVVVAL L+GANI GY KC+ DA+ K++  + +  + GAM    + LG+ G+RNALF +  G
Sbjct:   40 SSNFVFIFVLCVLCLAFDFWTVKNVSGRLLVGLRWWNNVKEDGTTEWRFESLEDMTEVSSADSRLFWLGMYGAPLAWLVVFIVDLLKLNFQWLIIVVVALTLNGANIVGYIKCSNDARQKLRFMVEDAGVKGAM----SVLGSAGVRNALFGLLAG 191          
BLAST of mRNA_M-pyrifera_M_contig7566.17848.1 vs. uniprot
Match: A0A6V1M0B7_HETAK (Golgi apparatus membrane protein TVP23 homolog n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1M0B7_HETAK)

HSP 1 Score: 172 bits (435), Expect = 1.440e-50
Identity = 86/163 (52.76%), Postives = 112/163 (68.71%), Query Frame = 0
Query:    8 SSSSILTYIICILMLAFDFWTVKNVSGRLMVGLRWWSNVKEDGSTEWVFESLEDMSEISSADYKLFWIGLYATPVLWIGLLITGIMLLKFQWLVIVVVALLLSGANIYGYTKCNADAKNKVQQTMANGMMAGAMQGAQAALGNVGLRNALFSVF--GGDQTQQ 168
            SS+ I  +++C+L+LA DFWTVKNV+GRL+VGLRWWS+V EDG T+WVFESLED+ E+ + D +LFW+GLYATP  W  L + G++    QWL++VVVAL LSGANI GYTKC  DAK K+Q  + +G+           + + G RN   S F  GG  T Q
Sbjct:   74 SSNFIFLFVLCVLLLAADFWTVKNVTGRLLVGLRWWSHVSEDGKTDWVFESLEDLGEVHAGDARLFWLGLYATPAAWAALFVIGLLKFNLQWLIVVVVALALSGANIIGYTKCRKDAKQKLQGFVESGVT--------GLMASEGFRNTFLSFFTGGGSNTNQ 228          
BLAST of mRNA_M-pyrifera_M_contig7566.17848.1 vs. uniprot
Match: A0A7S3MG51_9STRA (Golgi apparatus membrane protein TVP23 homolog n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MG51_9STRA)

HSP 1 Score: 171 bits (432), Expect = 4.070e-50
Identity = 85/155 (54.84%), Postives = 117/155 (75.48%), Query Frame = 0
Query:    5 KFVSSSSILTYIICILMLAFDFWTVKNVSGRLMVGLRWWSNVKEDGSTEWVFESLEDMSEISSADYKLFWIGLYATPVLWIGLLITGIMLLKFQWLVIVVVALLLSGANIYGYTKCNADAKNKVQQTMANGMMAGAMQGAQAALGNVGLRNALFS 159
             +V+++ I  ++ICI++LAFDFWTVKNVSGRL+VGLRWWS VK+DGS EW+FESLEDM+EIS  D ++FW GLY +P+ W+ LLI G + L+F++L +V+ AL+L+GANI GY KC++ AK K++  M  GM     QG+ A L N  +RN + S
Sbjct:   69 SWVTTNFIFVFVICIVLLAFDFWTVKNVSGRLLVGLRWWSYVKDDGSNEWIFESLEDMAEISPVDSRMFWGGLYVSPLCWLFLLIVGFLRLQFEYLPLVIAALMLNGANILGYIKCSSSAKAKMESMMKQGMQ----QGSMAVLENNSVRNWVLS 219          
BLAST of mRNA_M-pyrifera_M_contig7566.17848.1 vs. uniprot
Match: A0A812Z9G7_SYMMI (Golgi apparatus membrane protein TVP23 homolog n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Z9G7_SYMMI)

HSP 1 Score: 167 bits (424), Expect = 9.590e-50
Identity = 85/152 (55.92%), Postives = 114/152 (75.00%), Query Frame = 0
Query:    8 SSSSILTYIICILMLAFDFWTVKNVSGRLMVGLRWWSNVKEDGSTEWVFESLEDMSEISSADYKLFWIGLYATPVLWIGLLITGIMLLKFQWLVIVVVALLLSGANIYGYTKCNADAKNKVQQTMANGMMAGAMQGAQAALGNVGLRNALFS 159
            +S+ I+ +++CI++LAFDFWTVKNV+GRL+VGLRWWS V+EDG  EW+FESLEDM+E+S+ D +LFW  LY TPV W  LL+ G++ LK ++L IV+ AL+LS ANI GY KC+  A+ KV+  M NG+     QG+ AAL N  LRN + S
Sbjct:    7 TSNFIVVFVVCIILLAFDFWTVKNVTGRLLVGLRWWSYVREDGGNEWIFESLEDMAEVSAFDSRLFWGALYVTPVFWTLLLLMGLLRLKIEYLPIVIAALMLSSANIMGYIKCSNSAQAKVRNLMENGIK----QGSMAALENSSLRNWILS 154          
BLAST of mRNA_M-pyrifera_M_contig7566.17848.1 vs. uniprot
Match: A0A485KG22_9STRA (Golgi apparatus membrane protein TVP23 homolog n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KG22_9STRA)

HSP 1 Score: 170 bits (430), Expect = 1.060e-49
Identity = 80/137 (58.39%), Postives = 103/137 (75.18%), Query Frame = 0
Query:    1 MGGFKFVSSSSILTYIICILMLAFDFWTVKNVSGRLMVGLRWWSNVKEDGSTEWVFESLEDMSEISSADYKLFWIGLYATPVLWIGLLITGIMLLKFQWLVIVVVALLLSGANIYGYTKCNADAKNKVQQTMANGMM 137
            +GG   +S S +  ++IC+L+LAFDFWTVKNVSGRL+VGLRWW+ + EDGS EWVFESLEDMSEI   D K+FW GLY  PV+W+  L+  ++ L  +W +I +VAL LSGAN+ GYTKC+ DAKNK+Q  M  G +
Sbjct:   79 LGGI--MSDSFVFVFVICVLLLAFDFWTVKNVSGRLLVGLRWWNRINEDGSNEWVFESLEDMSEIDPLDAKIFWTGLYGAPVVWVLFLLIAVLKLNVEWALIAIVALTLSGANVVGYTKCSKDAKNKMQSMMTAGAL 213          
BLAST of mRNA_M-pyrifera_M_contig7566.17848.1 vs. uniprot
Match: A0A6G0W9V7_9STRA (Golgi apparatus membrane protein TVP23 homolog n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W9V7_9STRA)

HSP 1 Score: 164 bits (416), Expect = 1.250e-47
Identity = 76/137 (55.47%), Postives = 103/137 (75.18%), Query Frame = 0
Query:    1 MGGFKFVSSSSILTYIICILMLAFDFWTVKNVSGRLMVGLRWWSNVKEDGSTEWVFESLEDMSEISSADYKLFWIGLYATPVLWIGLLITGIMLLKFQWLVIVVVALLLSGANIYGYTKCNADAKNKVQQTMANGMM 137
            +GGF  VS+S +  ++IC+L+LAFDFWTVKN+SGRL+VGLRWW+ + EDGS EW+FESLEDMSEI   D ++FW  LY  PV+W   L+  I+    +W +I +VAL LSGAN+ GYTKC+ DAK+K++  M +G +
Sbjct:   76 LGGF--VSNSFVFIFVICVLLLAFDFWTVKNISGRLLVGLRWWNRINEDGSNEWIFESLEDMSEIDPLDARIFWTSLYGAPVVWAFFLLIAILKFNVEWALIAIVALTLSGANVVGYTKCSKDAKDKMRSMMTSGAL 210          
BLAST of mRNA_M-pyrifera_M_contig7566.17848.1 vs. uniprot
Match: A0A024TJ00_9STRA (Golgi apparatus membrane protein TVP23 homolog n=9 Tax=Aphanomyces TaxID=100860 RepID=A0A024TJ00_9STRA)

HSP 1 Score: 164 bits (415), Expect = 2.350e-47
Identity = 78/137 (56.93%), Postives = 101/137 (73.72%), Query Frame = 0
Query:    1 MGGFKFVSSSSILTYIICILMLAFDFWTVKNVSGRLMVGLRWWSNVKEDGSTEWVFESLEDMSEISSADYKLFWIGLYATPVLWIGLLITGIMLLKFQWLVIVVVALLLSGANIYGYTKCNADAKNKVQQTMANGMM 137
            +GGF  VS+S +  ++IC+L+LAFDFWTVKNVSGRL+VGLRWW+ + EDGS +WVFESLEDMSEI   D K+FW  LY  PV W   L+  ++ L  +W +I +VAL LSGAN+ GYTKC+ DAK+K+   M  G +
Sbjct:   82 LGGF--VSNSFVFIFVICVLLLAFDFWTVKNVSGRLLVGLRWWNRINEDGSNDWVFESLEDMSEIDPLDAKIFWTALYGAPVAWALFLLVAVLKLNVEWALIAIVALTLSGANVVGYTKCSKDAKSKMHSMMTAGAL 216          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7566.17848.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KM82_9PHAE4.110e-9688.10Golgi apparatus membrane protein TVP23 homolog n=1... [more]
D7FV24_ECTSI1.790e-9579.06Golgi apparatus membrane protein TVP23 homolog n=1... [more]
A0A835Z0U0_9STRA7.860e-5963.06Golgi apparatus membrane protein TVP23 homolog n=1... [more]
A0A7S2V0N0_9STRA4.960e-5557.05Golgi apparatus membrane protein TVP23 homolog n=1... [more]
A0A6V1M0B7_HETAK1.440e-5052.76Golgi apparatus membrane protein TVP23 homolog n=1... [more]
A0A7S3MG51_9STRA4.070e-5054.84Golgi apparatus membrane protein TVP23 homolog n=1... [more]
A0A812Z9G7_SYMMI9.590e-5055.92Golgi apparatus membrane protein TVP23 homolog n=1... [more]
A0A485KG22_9STRA1.060e-4958.39Golgi apparatus membrane protein TVP23 homolog n=1... [more]
A0A6G0W9V7_9STRA1.250e-4755.47Golgi apparatus membrane protein TVP23 homolog n=1... [more]
A0A024TJ00_9STRA2.350e-4756.93Golgi apparatus membrane protein TVP23 homolog n=9... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008564Golgi apparatus membrane protein TVP23-likePFAMPF05832DUF846coord: 5..120
e-value: 2.4E-42
score: 144.3
IPR008564Golgi apparatus membrane protein TVP23-likePANTHERPTHR13019UNCHARACTERIZEDcoord: 5..143
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 72..93
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 99..117
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 28..71
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 94..98
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 118..185
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..27
NoneNo IPR availableTMHMMTMhelixcoord: 72..94
NoneNo IPR availableTMHMMTMhelixcoord: 10..29
NoneNo IPR availableTMHMMTMhelixcoord: 98..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7566contigM-pyrifera_M_contig7566:3225..6033 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7566.17848.1mRNA_M-pyrifera_M_contig7566.17848.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig7566 3225..6033 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig7566.17848.1 ID=prot_M-pyrifera_M_contig7566.17848.1|Name=mRNA_M-pyrifera_M_contig7566.17848.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=186bp
MGGFKFVSSSSILTYIICILMLAFDFWTVKNVSGRLMVGLRWWSNVKEDG
STEWVFESLEDMSEISSADYKLFWIGLYATPVLWIGLLITGIMLLKFQWL
VIVVVALLLSGANIYGYTKCNADAKNKVQQTMANGMMAGAMQGAQAALGN
VGLRNALFSVFGGDQTQQGGGGGGSNNAGAGSVVV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008564TVP23-like