mRNA_M-pyrifera_M_contig75624.17838.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig75624.17838.1
Unique NamemRNA_M-pyrifera_M_contig75624.17838.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig75624.17838.1 vs. uniprot
Match: D7FIV2_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV2_ECTSI)

HSP 1 Score: 221 bits (563), Expect = 2.190e-63
Identity = 118/211 (55.92%), Postives = 144/211 (68.25%), Query Frame = 1
Query:   19 RYKCNQCSAANKEKSADDPTRCTASFNAWDAEVLAKMDDFVAKEFPFIVTGVNAISKSLVHRLGDDLVAGKGFSATAKFIRQAYMTTYIHRHRTYVALANLRRQRREALL-GVHNGDSPAFGEFEDRPGFNGSFPSEHYLRDIWHKWFSEIPVVRDEERTWTREQYLQRRAQQIDGHVFAGDASFKYAKVIRLSTGPDGKRARPVYGIFTI 648
            RY C  C+ ANK +  D+  R T +FNAWDA VLA MDD+V+KEFPF++T   AISKS+V RL DDL+ G GF+A +K +   Y   Y ++ R+YV+LAN    R + +   V  G  P F    D  GF+ S PS HYL DIWHK F E PVV+ +  +WTRE+YLQRRAQ +DG   AGDASFKYAKVIRLS G DG RARPV+GIFTI
Sbjct:   87 RYLCKGCTEANKGRPEDE--RTTQTFNAWDAGVLATMDDYVSKEFPFVLTKKAAISKSVVDRLADDLLEGTGFAAASKSLANTYHARYFNQLRSYVSLANRCVSRHKGMWPNVDLGMIPKFSSIGDPSGFHSSPPSAHYLGDIWHKGFYETPVVQADGCSWTREEYLQRRAQLVDGCSLAGDASFKYAKVIRLSAGADGTRARPVHGIFTI 295          
BLAST of mRNA_M-pyrifera_M_contig75624.17838.1 vs. uniprot
Match: A0A6H5KE68_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE68_9PHAE)

HSP 1 Score: 189 bits (480), Expect = 5.470e-57
Identity = 105/215 (48.84%), Postives = 136/215 (63.26%), Query Frame = 1
Query:   19 RYKCNQCSAANK--EKSADDPTRCTASFNAWDAEVLAKMDDFVAKEFPFIVTGVNAISKSLVHRLGDDLVAGKGFSATAKFIRQAYMTTYIHRHRTYVALANLRRQRREALLGVHNGDSPA---FGEFEDRPGFNGSFPSEHYLRDIWHKWFSEIPVVRDEERTWTREQYLQRRAQQIDGHVFAGDASFKYAKVIRLSTGPDGKRARPVYGIFTI 648
            R  C +C   N   E+S   PT    SFNAWD   L ++ D+V+KEFPFI+T  + I   LV RL DDLV GKGFSA AK+IRQA+ T ++     YV+LA+ RR  R +L G     +P    FG F+D   + G+ PS+HYLRD+W  +FSE+PV+  +   WTRE YL    Q+ DG V AGDASFK+AK+IRL     G+R RPV+GIFT+
Sbjct:   20 RIPCERCVEYNGTVEESEQRPT----SFNAWDVGCLDRLPDYVSKEFPFILTHRSGIDIRLVDRLADDLVHGKGFSAAAKYIRQAHTTKFMAFQLKYVSLADARRSSRVSLFGA----APVPVKFGSFDDTEKYCGAVPSDHYLRDVWRTYFSELPVLEVKGVKWTREDYLHCVHQRWDGTVLAGDASFKFAKIIRLGATAHGERTRPVHGIFTV 226          
BLAST of mRNA_M-pyrifera_M_contig75624.17838.1 vs. uniprot
Match: A0A6H5L553_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L553_9PHAE)

HSP 1 Score: 187 bits (475), Expect = 2.520e-56
Identity = 106/216 (49.07%), Postives = 136/216 (62.96%), Query Frame = 1
Query:   19 RYKCNQCSAANK--EKSADDPTRCTASFNAWDAEVLAKMDDFVAKEF-PFIVTGVNAISKSLVHRLGDDLVAGKGFSATAKFIRQAYMTTYIHRHRTYVALANLRRQRREALLGVHNGDSPA---FGEFEDRPGFNGSFPSEHYLRDIWHKWFSEIPVVRDEERTWTREQYLQRRAQQIDGHVFAGDASFKYAKVIRLSTGPDGKRARPVYGIFTI 648
            RYKC +C   N   E+S   PT    SFNAWD   L ++ D+V+KEF PFI+T  + I   LV RL DDL  GKGFSA AK+IRQA+ T ++     YV+L + RR  R +L G     +P    FG F+D   + G+ PS+HYLRD+W  +FSE+PV+  E   WT E YL R  Q+ DG V AGDASFK+AK+IRL     G+R RPV+GIFT+
Sbjct:   12 RYKCERCVEYNGTVEESEQRPT----SFNAWDVGCLDRLPDYVSKEFFPFILTHRSGIDIRLVDRLADDLAHGKGFSAAAKYIRQAHTTKFMVYQLKYVSLNDARRSSRVSLFGA----APVPEKFGSFDDTEKYCGAVPSDHYLRDVWRTYFSELPVLEVEGVKWTWEDYLPRVHQRWDGTVLAGDASFKFAKIIRLGATAHGERTRPVHGIFTV 219          
BLAST of mRNA_M-pyrifera_M_contig75624.17838.1 vs. uniprot
Match: A0A6H5KJA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA7_9PHAE)

HSP 1 Score: 179 bits (455), Expect = 7.460e-53
Identity = 91/210 (43.33%), Postives = 127/210 (60.48%), Query Frame = 1
Query:   22 YKCNQCSAANKEKSADDPTRCTASFNAWDAEVLAKMDDFVAKEFPFIVTGVNAISKSLVHRLGDDLVAGKGFSATAKFIRQAYMTTYIHRHRTYVALANLRRQRREALLGVHNGDSPA-FGEFEDRPGFNGSFPSEHYLRDIWHKWFSEIPVVRDEERTWTREQYLQRRAQQIDGHVFAGDASFKYAKVIRLSTGPDGKRARPVYGIFTI 648
            YKC +C+  NK K   +  +C  SFNAWDA  L ++ ++++KEFPF++T  + I   ++ RL D LV GKGFSA  K IRQA+ T ++     Y +L N RR         +   +P  FG F+D     G+ PSEHYLRD+W  +FS++PV+  +   WT E+Y  R  Q+ DG +  GDASFK+AK+IRL      +R RPVYG FT+
Sbjct:   12 YKCAKCAEFNKGKQRAE--KCKTSFNAWDAGCLRRLPEYISKEFPFLLTKRSGIEICMLDRLADGLVHGKGFSAGTKNIRQAHTTKFMVDQLKYTSLVNTRRTSSGIFRSANLAKTPERFGSFDDSTKHGGAVPSEHYLRDVWRLYFSKLPVLEVDSVDWTLEEYQHRLMQRWDGDILGGDASFKFAKIIRLGAKAGEERTRPVYGFFTV 219          
BLAST of mRNA_M-pyrifera_M_contig75624.17838.1 vs. uniprot
Match: A0A6H5KDX0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX0_9PHAE)

HSP 1 Score: 182 bits (462), Expect = 4.580e-52
Identity = 92/211 (43.60%), Postives = 130/211 (61.61%), Query Frame = 1
Query:   19 RYKCNQCSAANKEKSADDPTRCTASFNAWDAEVLAKMDDFVAKEFPFIVTGVNAISKSLVHRLGDDLVAGKGFSATAKFIRQAYMTTYIHRHRTYVALANLRRQRREALLGVHNGDSPA-FGEFEDRPGFNGSFPSEHYLRDIWHKWFSEIPVVRDEERTWTREQYLQRRAQQIDGHVFAGDASFKYAKVIRLSTGPDGKRARPVYGIFTI 648
            RYKC +C+  NK K   +  +   SFNAWDA  L ++ ++++KEFPF++T  + I   +V+RL DDLV GK FSA AK IRQA+ T ++     Y +L N RR         +  ++P  FG F+D   + G+ PSEHYLRD+W  +F ++PV+  +   WT E+Y  R  Q+ DG +  GDASFK+AK+IRL      +R RPVYG FT+
Sbjct:  118 RYKCAKCAEFNKGKQ--EAEKHKTSFNAWDAGCLRRLPEYISKEFPFLLTKRSGIEICMVNRLADDLVHGKDFSAAAKNIRQAHTTKFMVDQLKYTSLVNTRRTSSGIFRSANLANTPERFGSFDDSTKYGGAVPSEHYLRDVWRLYFPKLPVLEVDSVDWTLEEYQHRLMQRWDGDILGGDASFKFAKIIRLGAKAGEERTRPVYGFFTV 326          
BLAST of mRNA_M-pyrifera_M_contig75624.17838.1 vs. uniprot
Match: A0A6H5K4A9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4A9_9PHAE)

HSP 1 Score: 169 bits (429), Expect = 1.740e-48
Identity = 87/210 (41.43%), Postives = 123/210 (58.57%), Query Frame = 1
Query:   22 YKCNQCSAANKEKSADDPTRCTASFNAWDAEVLAKMDDFVAKEFPFIVTGVNAISKSLVHRLGDDLVAGKGFSATAKFIRQAYMTTYIHRHRTYVALANLRRQRREALLGVHNGDSPA-FGEFEDRPGFNGSFPSEHYLRDIWHKWFSEIPVVRDEERTWTREQYLQRRAQQIDGHVFAGDASFKYAKVIRLSTGPDGKRARPVYGIFTI 648
            ++C     A   K   +  +   SFNAWDA  L ++ ++++KEFPF++T  + I   +V RL DDLV GKGFSA AK I QA+ T ++     Y +L N RR         +   +P  FG F+D   + G+ PSEHYLRD+   +FS++PV+  +   WT E+Y  R  Q+ DG +  GDASFK+AK+IRL      +R RPVYG FT+
Sbjct:   11 FRCKCAKRAEFNKGKQEAEKRKTSFNAWDAGCLRRLPEYISKEFPFLLTERSGIEICMVGRLADDLVRGKGFSAAAKNILQAHTTKFMVDQLKYTSLVNTRRTSSGIFRSANLAKTPERFGSFDDSTKYGGAVPSEHYLRDVRRFYFSKLPVLEVDSVDWTLEEYQHRLMQRWDGDILGGDASFKFAKIIRLGAKAGEERTRPVYGFFTV 220          
BLAST of mRNA_M-pyrifera_M_contig75624.17838.1 vs. uniprot
Match: A0A6H5KSM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSM2_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 4.810e-44
Identity = 83/157 (52.87%), Postives = 107/157 (68.15%), Query Frame = 1
Query:   19 RYKCNQCSAANKEKSADDPTRCTASFNAWDAEVLAKMDDFVAKEFPFIVTGVNAISKSLVHRLGDDLVAGKGFSATAKFIRQAYMTTYIHRHRTYVALANLRRQRREAL--LG--VHNGDSPAFGEFEDRPGFNGSFPSEHYLRDIWHKWFSEIPVV 477
            RY C +C+ AN  K+++D  R TA+F AWD +VLA+MDDFV+KEFPF++T   AIS+SL+ RL DDL+ GKGF+AT+K ++ AY  TY   +R+YV+LAN R  + + L  LG     G  P F E  D  GFN   PS HYL DIWHKWF E+PV 
Sbjct:  113 RYYCKRCTDANAMKNSED--RTTATFKAWDPDVLARMDDFVSKEFPFVLTRKAAISRSLIDRLADDLLEGKGFAATSKSLQNAYTATYFKLYRSYVSLANRRVSQLKGLGLLGPDADVGKIPKFEEMADALGFNSRHPSAHYLGDIWHKWFDEMPVT 267          
BLAST of mRNA_M-pyrifera_M_contig75624.17838.1 vs. uniprot
Match: A0A6H5JQG2_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQG2_9PHAE)

HSP 1 Score: 161 bits (407), Expect = 5.750e-42
Identity = 89/237 (37.55%), Postives = 132/237 (55.70%), Query Frame = 1
Query:   19 RYKCNQCSAANKEKSADDPTRCTASFNAWDAEVLAKMDDFVAKEFPFIVTGVNAISKSLVHRLGDDLVAGKGFSATAKFIRQAYM--------------------------TTYIHRHRTYVALANLRRQRREALLGVHNGDSPA-FGEFEDRPGFNGSFPSEHYLRDIWHKWFSEIPVVRDEERTWTREQYLQRRAQQIDGHVFAGDASFKYAKVIRLSTGPDGKRARPVYGIFTI 648
            RYKC +C+  N+ K  ++  +   SFNAWDA  L ++ ++++KEFP ++T  + I   +V RL DDLV GKGFSA AK I Q  +                          T ++     Y +L N RR         ++  +P  FG F+D   + G+ PSEHYLRD+W  ++S++PV+  +   WT E+Y  R  Q+ DG V +GDASFK+AK+IRL      +R++PVYG+FT+
Sbjct:  152 RYKCAKCAKFNQGK--EEAEKRKTSFNAWDAGCLQRLPEYISKEFPSLLTKRSGIEIRMVDRLADDLVHGKGFSAAAKNICQVNVHFLICSVLKITXXXXXXXXXXXXXXTTKFMVDQLKYTSLVNSRRTSSGIFRSANHAKTPERFGSFDDSTKYGGAVPSEHYLRDVWWLYYSKLPVLEVDGVGWTLEEYQHRLMQRWDGEVLSGDASFKFAKIIRLGARAGEERSKPVYGLFTV 386          
BLAST of mRNA_M-pyrifera_M_contig75624.17838.1 vs. uniprot
Match: D7FVB4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVB4_ECTSI)

HSP 1 Score: 139 bits (350), Expect = 2.310e-37
Identity = 71/153 (46.41%), Postives = 96/153 (62.75%), Query Frame = 1
Query:  193 LVHRLGDDLVAGKGFSATAKFIRQAYMTTYIHRHRTYVALANLRRQRREALLGVHNGDSPA-FGEFEDRPGFNGSFPSEHYLRDIWHKWFSEIPVVRDEERTWTREQYLQRRAQQIDGHVFAGDASFKYAKVIRLSTGPDGKRARPVYGIFTI 648
            +V RL DDLV GKGFSA AK I QA+ T ++     Y +L N RR         +   +P  FG F+D   + G+ PSEHYLRD+W  +FS++PV+  +  +WT E+Y  R  Q+ DG V  GDASFK+AK+IRL      +R+RPVYG+FT+
Sbjct:    1 MVDRLADDLVHGKGFSAAAKNICQAHTTKFMVDQLKYTSLVNSRRTSSGIFRSANLAKTPERFGSFDDSTKYGGAVPSEHYLRDVWRLYFSKLPVLEVDGVSWTLEEYQHRLMQRWDGEVLGGDASFKFAKIIRLGARAGEERSRPVYGLFTV 153          
BLAST of mRNA_M-pyrifera_M_contig75624.17838.1 vs. uniprot
Match: A0A6H5K4M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4M0_9PHAE)

HSP 1 Score: 147 bits (372), Expect = 2.930e-37
Identity = 76/162 (46.91%), Postives = 103/162 (63.58%), Query Frame = 1
Query:   19 RYKCNQCSAANKEKSADDPTRCTASFNAWDAEVLAKMDDFVAKEFPFIVTGVNAISKS-LVHRLGDDLVAGKGFSATAKFIRQAYMTTYIHRHRTYVALANLRRQRREALLGVH--------NGDSPAFGEFEDRPGFNGSFPSEHYLRDIWHKWFSEIPVV 477
            RY C+ C   NK+K   D  R   SFNAWD  VLA+MD +V+  FPF++T  + I+ + +V RL DDL+ GKGFSAT+KF R+AYM +Y+ ++ +YV+L N    R +  +G H          D P FG F DR GFNG++PS+ YLR +WHKWF E  V+
Sbjct:  271 RYTCSGCLKHNKKKGTGDKDRRKGSFNAWDQGVLARMDSYVSNAFPFVLTRKSGIATTAVVARLADDLLNGKGFSATSKFKREAYMNSYMMQYHSYVSLVN----RCQRSIGGHFRAAAEEGTPDIPIFGGFGDREGFNGAWPSDQYLRAVWHKWFYETVVI 428          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig75624.17838.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIV2_ECTSI2.190e-6355.923'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5KE68_9PHAE5.470e-5748.84Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L553_9PHAE2.520e-5649.07Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJA7_9PHAE7.460e-5343.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDX0_9PHAE4.580e-5243.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K4A9_9PHAE1.740e-4841.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSM2_9PHAE4.810e-4452.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQG2_9PHAE5.750e-4237.553'-5' exonuclease domain-containing protein n=1 Ta... [more]
D7FVB4_ECTSI2.310e-3746.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K4M0_9PHAE2.930e-3746.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig75624contigM-pyrifera_M_contig75624:265..1047 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score224.9
Seed ortholog evalue3.5e-56
Seed eggNOG ortholog2880.D7FIV2
Preferred nameWRN
KEGG koko:K10900,ko:K20777
Hectar predicted targeting categoryother localisation
GOsGO:0000018,GO:0000019,GO:0000217,GO:0000287,GO:0000400,GO:0000403,GO:0000405,GO:0000723,GO:0000724,GO:0000725,GO:0000731,GO:0000738,GO:0000781,GO:0001302,GO:0001325,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003682,GO:0003684,GO:0003824,GO:0004003,GO:0004386,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005730,GO:0005737,GO:0005813,GO:0005815,GO:0005856,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006275,GO:0006281,GO:0006284,GO:0006302,GO:0006308,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006979,GO:0006996,GO:0007154,GO:0007275,GO:0007568,GO:0007569,GO:0008026,GO:0008094,GO:0008104,GO:0008150,GO:0008152,GO:0008156,GO:0008296,GO:0008297,GO:0008309,GO:0008310,GO:0008311,GO:0008408,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009267,GO:0009314,GO:0009378,GO:0009411,GO:0009416,GO:0009605,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010212,GO:0010225,GO:0010259,GO:0010332,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010941,GO:0015630,GO:0016043,GO:0016462,GO:0016604,GO:0016607,GO:0016787,GO:0016788,GO:0016796,GO:0016817,GO:0016818,GO:0016887,GO:0016895,GO:0017111,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0022607,GO:0030145,GO:0031297,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031981,GO:0032200,GO:0032356,GO:0032357,GO:0032392,GO:0032501,GO:0032502,GO:0032508,GO:0033036,GO:0033365,GO:0033554,GO:0034504,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0040008,GO:0040009,GO:0042162,GO:0042592,GO:0042594,GO:0042623,GO:0042802,GO:0042803,GO:0042981,GO:0042995,GO:0043005,GO:0043067,GO:0043085,GO:0043138,GO:0043140,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044446,GO:0044451,GO:0044464,GO:0044806,GO:0044877,GO:0045005,GO:0045910,GO:0045911,GO:0045934,GO:0045935,GO:0045950,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0046983,GO:0048478,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051054,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051276,GO:0051336,GO:0051345,GO:0051641,GO:0051716,GO:0051880,GO:0060249,GO:0060255,GO:0060542,GO:0061749,GO:0061820,GO:0061821,GO:0061849,GO:0062037,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070035,GO:0070336,GO:0070337,GO:0070727,GO:0071103,GO:0071214,GO:0071478,GO:0071479,GO:0071480,GO:0071496,GO:0071704,GO:0071840,GO:0071897,GO:0080090,GO:0090304,GO:0090305,GO:0090329,GO:0090656,GO:0090657,GO:0090737,GO:0097159,GO:0097458,GO:0098530,GO:0098687,GO:0104004,GO:0120025,GO:0140097,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1902570,GO:1905773,GO:2000104,GO:2000112,GO:2000113
EggNOG free text desc.3'-5' exonuclease activity
EggNOG OGsKOG4373@1,KOG4373@2759
EC3.1.11.1,3.6.4.12
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03032,ko03400
Exons2
Model size648
Cds size648
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816654.1198392-CDS-M-pyrifera_M_contig75624:264..7441622816654.1198392-CDS-M-pyrifera_M_contig75624:264..744Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig75624 265..744 +
1692278100.7884529-CDS-M-pyrifera_M_contig75624:264..7441692278100.7884529-CDS-M-pyrifera_M_contig75624:264..744Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig75624 265..744 +
1622816654.131628-CDS-M-pyrifera_M_contig75624:879..10471622816654.131628-CDS-M-pyrifera_M_contig75624:879..1047Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig75624 880..1047 +
1692278100.8023112-CDS-M-pyrifera_M_contig75624:879..10471692278100.8023112-CDS-M-pyrifera_M_contig75624:879..1047Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig75624 880..1047 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig75624.17838.1prot_M-pyrifera_M_contig75624.17838.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig75624 265..1047 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig75624.17838.1

>prot_M-pyrifera_M_contig75624.17838.1 ID=prot_M-pyrifera_M_contig75624.17838.1|Name=mRNA_M-pyrifera_M_contig75624.17838.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=216bp
FALAPGRYKCNQCSAANKEKSADDPTRCTASFNAWDAEVLAKMDDFVAKE
FPFIVTGVNAISKSLVHRLGDDLVAGKGFSATAKFIRQAYMTTYIHRHRT
YVALANLRRQRREALLGVHNGDSPAFGEFEDRPGFNGSFPSEHYLRDIWH
KWFSEIPVVRDEERTWTREQYLQRRAQQIDGHVFAGDASFKYAKVIRLST
GPDGKRARPVYGIFTI
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mRNA from alignment at M-pyrifera_M_contig75624:265..1047+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig75624.17838.1 ID=mRNA_M-pyrifera_M_contig75624.17838.1|Name=mRNA_M-pyrifera_M_contig75624.17838.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=783bp|location=Sequence derived from alignment at M-pyrifera_M_contig75624:265..1047+ (Macrocystis pyrifera P11B4 male)
TTCGCTCTCGCACCCGGTAGGTATAAATGCAACCAGTGCAGCGCGGCCAA CAAGGAGAAGTCGGCCGATGATCCCACCCGATGTACCGCCTCTTTCAATG CGTGGGATGCTGAAGTTTTGGCTAAAATGGACGATTTCGTCGCAAAGGAA TTTCCGTTCATTGTAACAGGAGTCAACGCCATAAGCAAGAGCTTGGTACA TCGTTTAGGAGACGACCTTGTCGCTGGCAAAGGCTTTTCGGCCACAGCGA AGTTCATTCGCCAGGCGTACATGACGACGTATATTCATCGACACCGTACA TACGTCGCGTTAGCAAACCTCCGTCGACAGCGACGCGAAGCGTTGTTGGG CGTTCATAACGGTGATTCCCCTGCGTTTGGAGAGTTCGAGGACCGCCCGG GCTTCAACGGCAGCTTCCCTTCGGAGCATTACCTACGGGACATCTGGCAC AAGTGGTTCAGCGAAATTCCAGTTGTACGGGTGAGAAGAAGGCGCTCTTG CCATGGCTTGCTTTCGAATAGCGCCACCAGGCTGTGTGGGAGAACGAAAA TGACTGTAGTAGTCTCAACACCAAGTGACCTCTGTTCTGTTCCCCTCGCA ATGATCACATGCCAGGACGAGGAGCGCACGTGGACACGTGAGCAGTATCT TCAAAGACGAGCACAACAGATAGACGGCCACGTATTTGCAGGCGACGCGT CCTTCAAGTATGCGAAGGTCATTCGGTTGTCGACAGGGCCGGATGGGAAG CGCGCGCGCCCTGTATACGGAATATTCACGATC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig75624:265..1047+

>mRNA_M-pyrifera_M_contig75624.17838.1 ID=mRNA_M-pyrifera_M_contig75624.17838.1|Name=mRNA_M-pyrifera_M_contig75624.17838.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1296bp|location=Sequence derived from alignment at M-pyrifera_M_contig75624:265..1047+ (Macrocystis pyrifera P11B4 male)
TTCGCTCTCGCACCCGGTAGGTATAAATGCAACCAGTGCAGCGCGGCCAA
CAAGGAGAAGTCGGCCGATGATCCCACCCGATGTACCGCCTCTTTCAATG
CGTGGGATGCTGAAGTTTTGGCTAAAATGGACGATTTCGTCGCAAAGGAA
TTTCCGTTCATTGTAACAGGAGTCAACGCCATAAGCAAGAGCTTGGTACA
TCGTTTAGGAGACGACCTTGTCGCTGGCAAAGGCTTTTCGGCCACAGCGA
AGTTCATTCGCCAGGCGTACATGACGACGTATATTCATCGACACCGTACA
TACGTCGCGTTAGCAAACCTCCGTCGACAGCGACGCGAAGCGTTGTTGGG
CGTTCATAACGGTGATTCCCCTGCGTTTGGAGAGTTCGAGGACCGCCCGG
GCTTCAACGGCAGCTTCCCTTCGGAGCATTACCTACGGGACATCTGGCAC
AAGTGGTTCAGCGAAATTCCAGTTGTACGGTTCGCTCTCGCACCCGGTAG
GTATAAATGCAACCAGTGCAGCGCGGCCAACAAGGAGAAGTCGGCCGATG
ATCCCACCCGATGTACCGCCTCTTTCAATGCGTGGGATGCTGAAGTTTTG
GCTAAAATGGACGATTTCGTCGCAAAGGAATTTCCGTTCATTGTAACAGG
AGTCAACGCCATAAGCAAGAGCTTGGTACATCGTTTAGGAGACGACCTTG
TCGCTGGCAAAGGCTTTTCGGCCACAGCGAAGTTCATTCGCCAGGCGTAC
ATGACGACGTATATTCATCGACACCGTACATACGTCGCGTTAGCAAACCT
CCGTCGACAGCGACGCGAAGCGTTGTTGGGCGTTCATAACGGTGATTCCC
CTGCGTTTGGAGAGTTCGAGGACCGCCCGGGCTTCAACGGCAGCTTCCCT
TCGGAGCATTACCTACGGGACATCTGGCACAAGTGGTTCAGCGAAATTCC
AGTTGTACGGGACGAGGAGCGCACGTGGACACGTGAGCAGTATCTTCAAA
GACGAGCACAACAGATAGACGGCCACGTATTTGCAGGCGACGCGTCCTTC
AAGTATGCGAAGGTCATTCGGTTGTCGACAGGGCCGGATGGGAAGCGCGC
GCGCCCTGTATACGGAATATTCACGATCGACGAGGAGCGCACGTGGACAC
GTGAGCAGTATCTTCAAAGACGAGCACAACAGATAGACGGCCACGTATTT
GCAGGCGACGCGTCCTTCAAGTATGCGAAGGTCATTCGGTTGTCGACAGG
GCCGGATGGGAAGCGCGCGCGCCCTGTATACGGAATATTCACGATC
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