mRNA_M-pyrifera_M_contig75624.17838.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig75624.17838.1 vs. uniprot
Match: D7FIV2_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV2_ECTSI) HSP 1 Score: 221 bits (563), Expect = 2.190e-63 Identity = 118/211 (55.92%), Postives = 144/211 (68.25%), Query Frame = 1 Query: 19 RYKCNQCSAANKEKSADDPTRCTASFNAWDAEVLAKMDDFVAKEFPFIVTGVNAISKSLVHRLGDDLVAGKGFSATAKFIRQAYMTTYIHRHRTYVALANLRRQRREALL-GVHNGDSPAFGEFEDRPGFNGSFPSEHYLRDIWHKWFSEIPVVRDEERTWTREQYLQRRAQQIDGHVFAGDASFKYAKVIRLSTGPDGKRARPVYGIFTI 648 RY C C+ ANK + D+ R T +FNAWDA VLA MDD+V+KEFPF++T AISKS+V RL DDL+ G GF+A +K + Y Y ++ R+YV+LAN R + + V G P F D GF+ S PS HYL DIWHK F E PVV+ + +WTRE+YLQRRAQ +DG AGDASFKYAKVIRLS G DG RARPV+GIFTI Sbjct: 87 RYLCKGCTEANKGRPEDE--RTTQTFNAWDAGVLATMDDYVSKEFPFVLTKKAAISKSVVDRLADDLLEGTGFAAASKSLANTYHARYFNQLRSYVSLANRCVSRHKGMWPNVDLGMIPKFSSIGDPSGFHSSPPSAHYLGDIWHKGFYETPVVQADGCSWTREEYLQRRAQLVDGCSLAGDASFKYAKVIRLSAGADGTRARPVHGIFTI 295
BLAST of mRNA_M-pyrifera_M_contig75624.17838.1 vs. uniprot
Match: A0A6H5KE68_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE68_9PHAE) HSP 1 Score: 189 bits (480), Expect = 5.470e-57 Identity = 105/215 (48.84%), Postives = 136/215 (63.26%), Query Frame = 1 Query: 19 RYKCNQCSAANK--EKSADDPTRCTASFNAWDAEVLAKMDDFVAKEFPFIVTGVNAISKSLVHRLGDDLVAGKGFSATAKFIRQAYMTTYIHRHRTYVALANLRRQRREALLGVHNGDSPA---FGEFEDRPGFNGSFPSEHYLRDIWHKWFSEIPVVRDEERTWTREQYLQRRAQQIDGHVFAGDASFKYAKVIRLSTGPDGKRARPVYGIFTI 648 R C +C N E+S PT SFNAWD L ++ D+V+KEFPFI+T + I LV RL DDLV GKGFSA AK+IRQA+ T ++ YV+LA+ RR R +L G +P FG F+D + G+ PS+HYLRD+W +FSE+PV+ + WTRE YL Q+ DG V AGDASFK+AK+IRL G+R RPV+GIFT+ Sbjct: 20 RIPCERCVEYNGTVEESEQRPT----SFNAWDVGCLDRLPDYVSKEFPFILTHRSGIDIRLVDRLADDLVHGKGFSAAAKYIRQAHTTKFMAFQLKYVSLADARRSSRVSLFGA----APVPVKFGSFDDTEKYCGAVPSDHYLRDVWRTYFSELPVLEVKGVKWTREDYLHCVHQRWDGTVLAGDASFKFAKIIRLGATAHGERTRPVHGIFTV 226
BLAST of mRNA_M-pyrifera_M_contig75624.17838.1 vs. uniprot
Match: A0A6H5L553_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L553_9PHAE) HSP 1 Score: 187 bits (475), Expect = 2.520e-56 Identity = 106/216 (49.07%), Postives = 136/216 (62.96%), Query Frame = 1 Query: 19 RYKCNQCSAANK--EKSADDPTRCTASFNAWDAEVLAKMDDFVAKEF-PFIVTGVNAISKSLVHRLGDDLVAGKGFSATAKFIRQAYMTTYIHRHRTYVALANLRRQRREALLGVHNGDSPA---FGEFEDRPGFNGSFPSEHYLRDIWHKWFSEIPVVRDEERTWTREQYLQRRAQQIDGHVFAGDASFKYAKVIRLSTGPDGKRARPVYGIFTI 648 RYKC +C N E+S PT SFNAWD L ++ D+V+KEF PFI+T + I LV RL DDL GKGFSA AK+IRQA+ T ++ YV+L + RR R +L G +P FG F+D + G+ PS+HYLRD+W +FSE+PV+ E WT E YL R Q+ DG V AGDASFK+AK+IRL G+R RPV+GIFT+ Sbjct: 12 RYKCERCVEYNGTVEESEQRPT----SFNAWDVGCLDRLPDYVSKEFFPFILTHRSGIDIRLVDRLADDLAHGKGFSAAAKYIRQAHTTKFMVYQLKYVSLNDARRSSRVSLFGA----APVPEKFGSFDDTEKYCGAVPSDHYLRDVWRTYFSELPVLEVEGVKWTWEDYLPRVHQRWDGTVLAGDASFKFAKIIRLGATAHGERTRPVHGIFTV 219
BLAST of mRNA_M-pyrifera_M_contig75624.17838.1 vs. uniprot
Match: A0A6H5KJA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA7_9PHAE) HSP 1 Score: 179 bits (455), Expect = 7.460e-53 Identity = 91/210 (43.33%), Postives = 127/210 (60.48%), Query Frame = 1 Query: 22 YKCNQCSAANKEKSADDPTRCTASFNAWDAEVLAKMDDFVAKEFPFIVTGVNAISKSLVHRLGDDLVAGKGFSATAKFIRQAYMTTYIHRHRTYVALANLRRQRREALLGVHNGDSPA-FGEFEDRPGFNGSFPSEHYLRDIWHKWFSEIPVVRDEERTWTREQYLQRRAQQIDGHVFAGDASFKYAKVIRLSTGPDGKRARPVYGIFTI 648 YKC +C+ NK K + +C SFNAWDA L ++ ++++KEFPF++T + I ++ RL D LV GKGFSA K IRQA+ T ++ Y +L N RR + +P FG F+D G+ PSEHYLRD+W +FS++PV+ + WT E+Y R Q+ DG + GDASFK+AK+IRL +R RPVYG FT+ Sbjct: 12 YKCAKCAEFNKGKQRAE--KCKTSFNAWDAGCLRRLPEYISKEFPFLLTKRSGIEICMLDRLADGLVHGKGFSAGTKNIRQAHTTKFMVDQLKYTSLVNTRRTSSGIFRSANLAKTPERFGSFDDSTKHGGAVPSEHYLRDVWRLYFSKLPVLEVDSVDWTLEEYQHRLMQRWDGDILGGDASFKFAKIIRLGAKAGEERTRPVYGFFTV 219
BLAST of mRNA_M-pyrifera_M_contig75624.17838.1 vs. uniprot
Match: A0A6H5KDX0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX0_9PHAE) HSP 1 Score: 182 bits (462), Expect = 4.580e-52 Identity = 92/211 (43.60%), Postives = 130/211 (61.61%), Query Frame = 1 Query: 19 RYKCNQCSAANKEKSADDPTRCTASFNAWDAEVLAKMDDFVAKEFPFIVTGVNAISKSLVHRLGDDLVAGKGFSATAKFIRQAYMTTYIHRHRTYVALANLRRQRREALLGVHNGDSPA-FGEFEDRPGFNGSFPSEHYLRDIWHKWFSEIPVVRDEERTWTREQYLQRRAQQIDGHVFAGDASFKYAKVIRLSTGPDGKRARPVYGIFTI 648 RYKC +C+ NK K + + SFNAWDA L ++ ++++KEFPF++T + I +V+RL DDLV GK FSA AK IRQA+ T ++ Y +L N RR + ++P FG F+D + G+ PSEHYLRD+W +F ++PV+ + WT E+Y R Q+ DG + GDASFK+AK+IRL +R RPVYG FT+ Sbjct: 118 RYKCAKCAEFNKGKQ--EAEKHKTSFNAWDAGCLRRLPEYISKEFPFLLTKRSGIEICMVNRLADDLVHGKDFSAAAKNIRQAHTTKFMVDQLKYTSLVNTRRTSSGIFRSANLANTPERFGSFDDSTKYGGAVPSEHYLRDVWRLYFPKLPVLEVDSVDWTLEEYQHRLMQRWDGDILGGDASFKFAKIIRLGAKAGEERTRPVYGFFTV 326
BLAST of mRNA_M-pyrifera_M_contig75624.17838.1 vs. uniprot
Match: A0A6H5K4A9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4A9_9PHAE) HSP 1 Score: 169 bits (429), Expect = 1.740e-48 Identity = 87/210 (41.43%), Postives = 123/210 (58.57%), Query Frame = 1 Query: 22 YKCNQCSAANKEKSADDPTRCTASFNAWDAEVLAKMDDFVAKEFPFIVTGVNAISKSLVHRLGDDLVAGKGFSATAKFIRQAYMTTYIHRHRTYVALANLRRQRREALLGVHNGDSPA-FGEFEDRPGFNGSFPSEHYLRDIWHKWFSEIPVVRDEERTWTREQYLQRRAQQIDGHVFAGDASFKYAKVIRLSTGPDGKRARPVYGIFTI 648 ++C A K + + SFNAWDA L ++ ++++KEFPF++T + I +V RL DDLV GKGFSA AK I QA+ T ++ Y +L N RR + +P FG F+D + G+ PSEHYLRD+ +FS++PV+ + WT E+Y R Q+ DG + GDASFK+AK+IRL +R RPVYG FT+ Sbjct: 11 FRCKCAKRAEFNKGKQEAEKRKTSFNAWDAGCLRRLPEYISKEFPFLLTERSGIEICMVGRLADDLVRGKGFSAAAKNILQAHTTKFMVDQLKYTSLVNTRRTSSGIFRSANLAKTPERFGSFDDSTKYGGAVPSEHYLRDVRRFYFSKLPVLEVDSVDWTLEEYQHRLMQRWDGDILGGDASFKFAKIIRLGAKAGEERTRPVYGFFTV 220
BLAST of mRNA_M-pyrifera_M_contig75624.17838.1 vs. uniprot
Match: A0A6H5KSM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSM2_9PHAE) HSP 1 Score: 161 bits (408), Expect = 4.810e-44 Identity = 83/157 (52.87%), Postives = 107/157 (68.15%), Query Frame = 1 Query: 19 RYKCNQCSAANKEKSADDPTRCTASFNAWDAEVLAKMDDFVAKEFPFIVTGVNAISKSLVHRLGDDLVAGKGFSATAKFIRQAYMTTYIHRHRTYVALANLRRQRREAL--LG--VHNGDSPAFGEFEDRPGFNGSFPSEHYLRDIWHKWFSEIPVV 477 RY C +C+ AN K+++D R TA+F AWD +VLA+MDDFV+KEFPF++T AIS+SL+ RL DDL+ GKGF+AT+K ++ AY TY +R+YV+LAN R + + L LG G P F E D GFN PS HYL DIWHKWF E+PV Sbjct: 113 RYYCKRCTDANAMKNSED--RTTATFKAWDPDVLARMDDFVSKEFPFVLTRKAAISRSLIDRLADDLLEGKGFAATSKSLQNAYTATYFKLYRSYVSLANRRVSQLKGLGLLGPDADVGKIPKFEEMADALGFNSRHPSAHYLGDIWHKWFDEMPVT 267
BLAST of mRNA_M-pyrifera_M_contig75624.17838.1 vs. uniprot
Match: A0A6H5JQG2_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQG2_9PHAE) HSP 1 Score: 161 bits (407), Expect = 5.750e-42 Identity = 89/237 (37.55%), Postives = 132/237 (55.70%), Query Frame = 1 Query: 19 RYKCNQCSAANKEKSADDPTRCTASFNAWDAEVLAKMDDFVAKEFPFIVTGVNAISKSLVHRLGDDLVAGKGFSATAKFIRQAYM--------------------------TTYIHRHRTYVALANLRRQRREALLGVHNGDSPA-FGEFEDRPGFNGSFPSEHYLRDIWHKWFSEIPVVRDEERTWTREQYLQRRAQQIDGHVFAGDASFKYAKVIRLSTGPDGKRARPVYGIFTI 648 RYKC +C+ N+ K ++ + SFNAWDA L ++ ++++KEFP ++T + I +V RL DDLV GKGFSA AK I Q + T ++ Y +L N RR ++ +P FG F+D + G+ PSEHYLRD+W ++S++PV+ + WT E+Y R Q+ DG V +GDASFK+AK+IRL +R++PVYG+FT+ Sbjct: 152 RYKCAKCAKFNQGK--EEAEKRKTSFNAWDAGCLQRLPEYISKEFPSLLTKRSGIEIRMVDRLADDLVHGKGFSAAAKNICQVNVHFLICSVLKITXXXXXXXXXXXXXXTTKFMVDQLKYTSLVNSRRTSSGIFRSANHAKTPERFGSFDDSTKYGGAVPSEHYLRDVWWLYYSKLPVLEVDGVGWTLEEYQHRLMQRWDGEVLSGDASFKFAKIIRLGARAGEERSKPVYGLFTV 386
BLAST of mRNA_M-pyrifera_M_contig75624.17838.1 vs. uniprot
Match: D7FVB4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVB4_ECTSI) HSP 1 Score: 139 bits (350), Expect = 2.310e-37 Identity = 71/153 (46.41%), Postives = 96/153 (62.75%), Query Frame = 1 Query: 193 LVHRLGDDLVAGKGFSATAKFIRQAYMTTYIHRHRTYVALANLRRQRREALLGVHNGDSPA-FGEFEDRPGFNGSFPSEHYLRDIWHKWFSEIPVVRDEERTWTREQYLQRRAQQIDGHVFAGDASFKYAKVIRLSTGPDGKRARPVYGIFTI 648 +V RL DDLV GKGFSA AK I QA+ T ++ Y +L N RR + +P FG F+D + G+ PSEHYLRD+W +FS++PV+ + +WT E+Y R Q+ DG V GDASFK+AK+IRL +R+RPVYG+FT+ Sbjct: 1 MVDRLADDLVHGKGFSAAAKNICQAHTTKFMVDQLKYTSLVNSRRTSSGIFRSANLAKTPERFGSFDDSTKYGGAVPSEHYLRDVWRLYFSKLPVLEVDGVSWTLEEYQHRLMQRWDGEVLGGDASFKFAKIIRLGARAGEERSRPVYGLFTV 153
BLAST of mRNA_M-pyrifera_M_contig75624.17838.1 vs. uniprot
Match: A0A6H5K4M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4M0_9PHAE) HSP 1 Score: 147 bits (372), Expect = 2.930e-37 Identity = 76/162 (46.91%), Postives = 103/162 (63.58%), Query Frame = 1 Query: 19 RYKCNQCSAANKEKSADDPTRCTASFNAWDAEVLAKMDDFVAKEFPFIVTGVNAISKS-LVHRLGDDLVAGKGFSATAKFIRQAYMTTYIHRHRTYVALANLRRQRREALLGVH--------NGDSPAFGEFEDRPGFNGSFPSEHYLRDIWHKWFSEIPVV 477 RY C+ C NK+K D R SFNAWD VLA+MD +V+ FPF++T + I+ + +V RL DDL+ GKGFSAT+KF R+AYM +Y+ ++ +YV+L N R + +G H D P FG F DR GFNG++PS+ YLR +WHKWF E V+ Sbjct: 271 RYTCSGCLKHNKKKGTGDKDRRKGSFNAWDQGVLARMDSYVSNAFPFVLTRKSGIATTAVVARLADDLLNGKGFSATSKFKREAYMNSYMMQYHSYVSLVN----RCQRSIGGHFRAAAEEGTPDIPIFGGFGDREGFNGAWPSDQYLRAVWHKWFYETVVI 428 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig75624.17838.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig75624.17838.1 >prot_M-pyrifera_M_contig75624.17838.1 ID=prot_M-pyrifera_M_contig75624.17838.1|Name=mRNA_M-pyrifera_M_contig75624.17838.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=216bp FALAPGRYKCNQCSAANKEKSADDPTRCTASFNAWDAEVLAKMDDFVAKEback to top mRNA from alignment at M-pyrifera_M_contig75624:265..1047+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig75624.17838.1 ID=mRNA_M-pyrifera_M_contig75624.17838.1|Name=mRNA_M-pyrifera_M_contig75624.17838.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=783bp|location=Sequence derived from alignment at M-pyrifera_M_contig75624:265..1047+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig75624:265..1047+ >mRNA_M-pyrifera_M_contig75624.17838.1 ID=mRNA_M-pyrifera_M_contig75624.17838.1|Name=mRNA_M-pyrifera_M_contig75624.17838.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1296bp|location=Sequence derived from alignment at M-pyrifera_M_contig75624:265..1047+ (Macrocystis pyrifera P11B4 male)back to top |