mRNA_M-pyrifera_M_contig7548.17807.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig7548.17807.1
Unique NamemRNA_M-pyrifera_M_contig7548.17807.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig7548.17807.1 vs. uniprot
Match: A0A6H5L8R8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8R8_9PHAE)

HSP 1 Score: 301 bits (770), Expect = 3.550e-92
Identity = 199/412 (48.30%), Postives = 227/412 (55.10%), Query Frame = 1
Query:    4 FAAAASTEMAQEDAQTAAEAAHCRREMERLELAARLASLAATAEHRTRGSVVLRRLPPSHPQHARCLRAATQNVKPEFFSGESPYSAVKVLDIYKIENKYLLDKFQRAGKVKDSCKVKGLFCHVPDDSLEHVVLYGMGG-GVRGDGGGGTVDADTATH-------RYDWDGDPIDLIWTNKGTSLRERAEIGGGGAASLRCHTTAANNRRATADGGVRLAKPLVFPRLFSRYGTLEEEREYANRA-----EEERG--------------------------------------GAVSGLRLLALCRVMIGSMCVSPSPSA-----NRGAGG----------------------------------------------GQAEFDSVYFPREEEYLLLNETFVLPEFLVVHRFA 933
            FAAAAS EM  EDAQ AAE  HCRRE+ERLEL+ARLASLA TAEHRTRG VVLRRLPP+HPQH RCLRAAT+NV+P FFS ES Y AV+VLDIYK+EN++LL++FQRA + ++ CKVKGLFCHVPD SLEHVVLYGMGG G   D   G       T          DWD DPID                       L   T  A+ RR T+ GG    +PL FPR FSR+ TLEEER+YANR+     +E+RG                                      GAVSGLR LALCRVMIGS  V+ + S       +G GG                                              GQAEFDS++FPREEEY +LNE FVLPEFLVVHRF 
Sbjct:  216 FAAAASAEMGAEDAQMAAEDEHCRREVERLELSARLASLATTAEHRTRGCVVLRRLPPTHPQHERCLRAATENVRPGFFSSESRYGAVRVLDIYKMENRFLLERFQRAAEAREPCKVKGLFCHVPDASLEHVVLYGMGGAGALMDECDGYSSGAALTDGKAGLLPTNDWDRDPIDSF---------------------LGAPTVGASGRRETS-GGNNGKRPLEFPRAFSRHSTLEEERQYANRSSCGCDDEDRGMRQQHRSWSPPSSGCHPLQRQRRHRVPGDGSREDGQQRGAVSGLRFLALCRVMIGSTHVAATTSPVTWGQRKGNGGTQPHDPKSLSPRHRTDSIALQKRQRASSPRSAGHPADEFSLPTPPPGQAEFDSIFFPREEEYRILNEAFVLPEFLVVHRFV 605          
BLAST of mRNA_M-pyrifera_M_contig7548.17807.1 vs. uniprot
Match: D8LSF4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSF4_ECTSI)

HSP 1 Score: 289 bits (739), Expect = 1.210e-89
Identity = 190/405 (46.91%), Postives = 221/405 (54.57%), Query Frame = 1
Query:   28 MAQEDAQTAAEAAHCRREMERLELAARLASLAATAEHRTRGSVVLRRLPPSHPQHARCLRAATQNVKPEFFSGESPYSAVKVLDIYKIENKYLLDKFQRAGKVKDSCKVKGLFCHVPDDSLEHVVLYGMGG--GVRGDGGGGTVDADTATH-------RYDWDGDPIDLIWTNKGTSLRERAEIGGGGAASLRCHTTAANNRRATADGGVRLAKPLVFPRLFSRYGTLEEEREYANRA-----EEERG--------------------------------------GAVSGLRLLALCRVMIGSMCVSPSPSA-----NRGAGG----------------------------------------------GQAEFDSVYFPREEEYLLLNETFVLPEFLVVHRFA 933
            M  EDAQ AAE   CRRE+ERLE++ RLASLA TAEHRTRG VVLRRLPP+HPQH RCLRAAT+NV+P FFS ES Y AV+VLDIYK+EN++LLD+FQRA + ++ CKVKGLFCHVPD SLEHVVLYGMGG   +  + GG +  + + T         YDWD DPID                       L   T   +  R T+ GG    +PL FPR FSR+ TLEEER+YANR+     +E+RG                                      GAVSGLR LALCRVMIGS  V+ + S       +G GG                                              GQAEFDSVYFPREEEY +LNE FVLPEFLVVHRF 
Sbjct:    1 MGAEDAQMAAEGELCRREVERLEISGRLASLATTAEHRTRGCVVLRRLPPTHPQHERCLRAATENVRPGFFSSESRYGAVRVLDIYKMENRFLLDRFQRAAEAREPCKVKGLFCHVPDASLEHVVLYGMGGTGALMDECGGYSSGSASKTDGKAGLLPTYDWDLDPIDSF---------------------LGAPTVGVSGGRETS-GGNNGKRPLEFPRAFSRHSTLEEERQYANRSSCGCDDEDRGMRQHHASWSLPSSGCHPLQRQRRHRVPGDGSHEDGQERGAVSGLRFLALCRVMIGSTHVAATTSPATWGQGKGNGGTPPHDPKSLSPRHRTDSIALQKRQRASSPRSAGRPADEFSLPTPPPGQAEFDSVYFPREEEYRILNEAFVLPEFLVVHRFV 383          
BLAST of mRNA_M-pyrifera_M_contig7548.17807.1 vs. uniprot
Match: A0A7S2WFR5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WFR5_9STRA)

HSP 1 Score: 152 bits (384), Expect = 3.210e-38
Identity = 133/374 (35.56%), Postives = 163/374 (43.58%), Query Frame = 1
Query:    1 RFAAAASTEMAQEDAQTAAEAAHCRREMERLELAARLASLAATAEHRTRGSVVLRRLPPSHPQHARCLRAATQNVKPEFFSGESP----YSAVKVLDIYKIENKYLLDKFQRAGKVKDSCKVKGLFCHVPDDSLEHVVLYGMGGGVRGDGGGGTVDADTATHRYDWDGDPIDLI---WTNKGTSLRERAEIGGGGAASLRCHTTAANNRRATADGG----------VRLAKPLVFPRLFSRYGTLEEER-----------------EYANRAEEER----------------------GGAV---SGLRLLALCRVMIGSMCV---SPSPSANRGAGGGQ-AEFDSVYFPREEEYLLLNETFVLPEFLVVHRFA 933
            R+AA A  E+    A+   E   C    + L  A RL   A   EH TRG ++L+RLP SHPQ+ RC RAAT+NVK +FF+        Y+ V VLD+YKIEN+ LL  FQ      +  KVKGLFC VP   +E +V++G                    H+      P  L+   + +      E   I GGG                   G           VR +  L FPR FSR+ TLEE+R                 E A R EE                        G  V   SG R LALCRVMIG + V   S   S    A  GQ A+FDS+Y P  EEY LLN T VLPEFLV +RF 
Sbjct:   13 RYAAIAEAEVQSLSARRGEEVVACDLHRKHLSTARRLGLFALHLEHETRGKIMLKRLPQSHPQYQRCRRAATENVKSDFFAANKQTNGRYTGVTVLDVYKIENRLLLKDFQNTSATSEPSKVKGLFCRVPRKCVERLVVHGA-------------------HQR-----PPPLLQNAFQHSWVDATEGEPITGGGVDEXXXXXXXXXXXXXXXXGNMSMEGYAARAVRRSPCLPFPRNFSRHSTLEEDRPAVNGLSRKKEIEQMMQEMAQRHEEPGDKWLGLQQELARAKADMEAEGLGDGVEPGSGTRFLALCRVMIGKIFVASKSQETSPFLAAPDGQLADFDSIYSPTREEYRLLNPTNVLPEFLVEYRFT 362          
BLAST of mRNA_M-pyrifera_M_contig7548.17807.1 vs. uniprot
Match: A0A8J2X2L4_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X2L4_9STRA)

HSP 1 Score: 144 bits (364), Expect = 1.680e-35
Identity = 110/288 (38.19%), Postives = 146/288 (50.69%), Query Frame = 1
Query:   91 LELAARLASLAATAEHRTRGSVVLRRLPPSHPQHARCLRAATQNVKPEFFSGESPYSAVKVLDIYKIENKYLLDKFQRAGKVKDSCK-------VKGLFCHVPDDSLEHVVLYGMGGGVRGDGGGGTVDADTATHRYDWDGDPIDLIWTNKGTSLRERAEIGGGGAASLRCHTTAANNRRATADGGVRLAKPLVFPRLFSRYGTLEEEREYANRAEEERGGAVSGLRLLALCRVMIGSMCVSPSPSANRGAGGGQAEFDSVYFPREEEYLLLNETFVLPEFLVVHRFA 933
            LEL  RLA+ A   +H TRG+  LRRL P   Q+ARC RAA +N +  FF+G  P++ + V+D++KIEN+ LLD FQR  + + + +       VKGLFC VP  S+E +VLYG+    RGD        +       W  D          T     A   GG   ++    T    RRA  D     A  L FPR FSRY TLE  R  A +  E  G     LR+LALCRV++G++ V    S +        E D++Y    EEY  L    VLPEFL+++R A
Sbjct:  149 LELRNRLAAFALHCDHETRGAARLRRLTPRDAQYARCRRAAAENARRGFFAGGGPFAGLDVVDVFKIENRCLLDAFQREVERRKTPRSDEKKIAVKGLFCDVPAASVERLVLYGL----RGD----AAPLERTLFDDAWLAD-------QSRTPGAPTAASPGGFGGTVERKPTEVKARRAARD-----AASLEFPRAFSRYSTLESVRGDARKGGERAGR----LRVLALCRVLVGAVRVEEDASTDG------PEPDALYSSVREEYRPLKPENVLPEFLLLYRLA 406          
BLAST of mRNA_M-pyrifera_M_contig7548.17807.1 vs. uniprot
Match: A0A2R5GCW3_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GCW3_9STRA)

HSP 1 Score: 136 bits (342), Expect = 5.020e-32
Identity = 96/287 (33.45%), Postives = 137/287 (47.74%), Query Frame = 1
Query:  136 HRTRGSVVLRRLPPSHPQHARCLRAATQNVKPEFFSGESPYSAVKVLDIYKIENKYLLDKFQRAGKVKDSCKVKGLFCHVPDDSLEHVVLYGMGGGVRGDGGGGTVDADTATHRYDWDGDPIDLIWTNKGTSLRERAEIGGGGAASLRCHTTAANNRRATADGGVRLAKPLVFPRLFSRYGTLEEEREYANR--------AEEERGGAVSGL------------RLLALCRVMIGSMCVSPS--PSANRGAGGGQAEFDSVYFPREEEYLLLNETFVLPEFLVVHRF 930
            H T G + LRRL P +PQ++RC RA  +NVK +FF  ++ YS +KVLD++KIEN+ LL  FQR         VKGLFC VP++SL  +++ GMG          T DA+                     T LR            L      A +    A+     +KP+ FP+ FSR+ TLEE RE            + ++  G  S +            R LALCRV+IGS  V+ +  P          ++FDS++    +EYL+L+   VLPEFL+ + +
Sbjct:  734 HETEGRINLRRLTPDNPQYSRCKRATAENVKSDFFGKDANYSGIKVLDVFKIENRPLLRDFQRRAAALKPGSVKGLFCAVPEESLFRIIVEGMGRK--------TQDAEDTDEAXXXXXXXXXXXXXXXATFLRTH----------LVALEPEAGSSPGYAEARFLASKPVAFPKQFSRFSTLEEFREAVKAPVMGTNTGSRDQHHGQASAVSSSSSSTSQTVPRYLALCRVIIGSSFVTSADYPGFPNVDSATSSKFDSIFSSSLDEYLVLHGHHVLPEFLIRYEY 1002          
BLAST of mRNA_M-pyrifera_M_contig7548.17807.1 vs. uniprot
Match: A0A7S1UH08_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UH08_9STRA)

HSP 1 Score: 133 bits (335), Expect = 3.250e-31
Identity = 113/332 (34.04%), Postives = 144/332 (43.37%), Query Frame = 1
Query:  133 EHRTRGSVVLRRLPPSHPQHARCLRAATQNVKPEFFSGESP---------YSAVKVLDIYKIENKYLLDKFQRAGKVKDSCKVKGLFCHVPDDSLEHVVLYGM-----------------GGGVRGDGGGGTVDADTATHRYDWDGDPIDLIWT-NKGTSLRERAEIGGGGAASL---------------RCHTTAANNRRATADGGVRLAKPLVFPRLFSRYGTLEEEREYANRAEEERGG-----AV------------------SGLRLLALCRVMIGSMCVSPSPSANRGAGGGQAEFDSVYFPREEEYLLLNETFVLPEFLVVHRFA 933
            EH TRGSVVL+RLPP+HPQH RC RAA +NV+  +F              Y+ +KVLD+YKIENK LL+KFQ A       KVKGLFC VP D LEHV+L GM                   G RG  G        A         PI      ++ ++L E AE+  GG A+L                    AA    + A  G  +       +    Y +       A       GG     AV                  S +RLL LCRVMIG + +     A+        +FDS+Y P  EEY LL   +VLPEF+V++R+ 
Sbjct:  184 EHETRGSVVLKRLPPTHPQHLRCKRAALENVRKGYFQAAPAALPEGSFLRYTGLKVLDVYKIENKLLLEKFQAAAARDKPGKVKGLFCTVPMDCLEHVILSGMFPNPSERLKQAFKGSWFSMGQRGGQGHAARVVKEAR--------PIPFPRNFSRHSTLLEEAELVHGGLANLPPAPKRTLLGKPTPQSAGEEAAGEASSPATEGAGVGNTSTTFQASKEYRSAVRAAHAAVLLSNASGGDSAAAAVPEDGLRQALSDDAPLGEDSDIRLLMLCRVMIGDIFICDESQASFPERVPPGKFDSMYSPALEEYRLLKPEYVLPEFIVLYRYT 507          
BLAST of mRNA_M-pyrifera_M_contig7548.17807.1 vs. uniprot
Match: A0A7S2W257_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2W257_9STRA)

HSP 1 Score: 129 bits (323), Expect = 5.660e-30
Identity = 91/270 (33.70%), Postives = 132/270 (48.89%), Query Frame = 1
Query:  136 HRTRGSVVLRRLPPSHPQHARCLRAATQNVKPEFFSGESPYSAVKVLDIYKIENKYLLDKFQR-AGKVKDSCKVKGLFCHVPDDSLEHVVLYGMGGGVRGDGGGGTVDADTATHRYDWDGDPIDLIWTNKGTSLRERAEIGGGGAASLRCHTTAANNRRATADGGVRLAKPLVFPRLFSRYGTLEEEREYANRAEEERGGAVSGLRLLALCRVMIGS-MCVSPSPSANRG---AGGGQAEFDSVYFPREEEYLLLNETFVLPEFLVVHRF 930
            H T   V L+RL  ++PQ  RC RA  +NVK EFF   S YS + V++++KIEN+ +L +FQ+ A K+K    VKGLFC +P++SLE VV+ GM G           + D        D     ++    G +L  + +          C           A+     AK   FP  FSRY TLE  R      + ++      +R LAL RV+IG   C S           +G    +FDS++   ++EYL+LN  +VLPEFL+ ++F
Sbjct:  181 HETNDQVTLKRLNETNPQFIRCKRACQENVKAEFFGTTSNYSGISVMEVFKIENRPMLKQFQKMAAKLKPG-SVKGLFCTIPEESLERVVIQGMRG-----------EKDICKEEDSHDSQGKTVL---TGKNLFSQVQY---------CPFPNDQVSSRFAEERFNRAKDAPFPATFSRYSTLEANRHLMESKQSDQEETTEPVRTLALSRVIIGECFCTSNQYEGFPNIPTSGSSTNKFDSMFSSGQDEYLMLNPNYVLPEFLIRYKF 426          
BLAST of mRNA_M-pyrifera_M_contig7548.17807.1 vs. uniprot
Match: W2PZZ0_PHYPN (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2PZZ0_PHYPN)

HSP 1 Score: 129 bits (324), Expect = 6.730e-30
Identity = 99/294 (33.67%), Postives = 141/294 (47.96%), Query Frame = 1
Query:   58 EAAHCRREMERLELAARLASLAATAEHRTRGSVVLRRLPPSHPQHARCLRAATQNVKPEFFSGESPYSAVKVLDIYKIENKYLLDKFQR----AGKVKDSCKVKGLFCHVPDDSLEHVVLYGMGGGVRGDGGGGTVDADTATHRYDWDGDPIDLIWTNKGTSLRERAEIGGGGAASLRCHTTAANNRRATADGGVRLAKPLVFPRLFSRYGTLEEEREYANRAEEERGGAVSGLRLLALCRVMIGSMCVSPSPSANRGAGGGQAEFDSVYFPREEEYLLLNETFVLPEFLVVHR 927
            E A CR +    +L  +  S +   E  T G V + RLP S PQ  RC++AAT+N+K  FFS    +  ++VL++YKI+N+ LL+ FQR      K     K+KGLFC VP +S+E  ++YGM  G  G+               D DG  I +   ++   L++R +  G         T  A   R+  + G     PL FPR FSRY TLEE R      E      +  ++ LALCRV +       S S  R          +++F  EEEYL+     V+PEF++  R
Sbjct:  170 EEAKCRDQRVLTKLLFQFNSFSLQLESETSGQVRMWRLPVSDPQRMRCVKAATENIKKHFFSSSEQF--LEVLEVYKIDNRVLLNSFQRFTSSLSKTCSEIKIKGLFCSVPAESVERCIVYGMHAGENGE-----------PRFLDPDGAEIKIF--SRSVLLQDRKDAPG---------TNMAFRARSKVNNGT----PLQFPRRFSRYNTLEEMRTTITTTESRSEDHLRAVQYLALCRVAMTKTLRVKSNSVARFPE--DPSVGALHFTSEEEYLVRYPDAVVPEFIIQFR 433          
BLAST of mRNA_M-pyrifera_M_contig7548.17807.1 vs. uniprot
Match: A0A329SBC3_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SBC3_9STRA)

HSP 1 Score: 129 bits (324), Expect = 1.350e-29
Identity = 97/280 (34.64%), Postives = 134/280 (47.86%), Query Frame = 1
Query:  133 EHRTRGSVVLRRLPPSHPQHARCLRAATQNVKPEFFSGESPYSAVKVLDIYKIENKYLLDKFQR------------AGKVKDSCKVKGLFCHVPDDSLEHVVLYGMGGGVRGDGGGGTVDADTATHRYDWDGDPIDLIWTNKGTSLRERAEIGGGGAASLRCHTTAANNRRATADGGVRLAKPLVFPRLFSRYGTLEEEREYANRAEEERGGAVSGLRLLALCRVMIGSMCVSPSPSANRGAGGGQAEFD------SVYFPREEEYLLLNETFVLPEFLV 918
            E  T G V + RLP S PQ  RC++AAT+N+K  FFS  SP  +++VL++YKI+N+ LL+ FQ               K +   K+KGLFC VP DS+E  V YGM            V+ +T   R+  D    ++   N+ T L+ R +  G         T AA   R+  + G     PL FPR FSRY TLEE R      E  R   +  ++ L LCRV +            R      AEF       +++F  EEEYL+     V+PEF++
Sbjct: 1722 ESETSGQVRMWRLPVSDPQRKRCVKAATENIKKRFFS--SPGQSLEVLEVYKIDNRVLLNSFQNFTNSLXXXXXXXXXKTRSEIKIKGLFCSVPADSVERCVAYGMH----------AVNEETGEPRF-LDAQEAEIKVFNRSTLLQNRKDAPG---------TAAAFRARSKVNNGA----PLQFPRRFSRYSTLEEMRTMTA-TESRREDQLPAVQYLGLCRVAMSKTL--------RAKDSADAEFPEDPSVGALHFTNEEEYLVRYPDAVVPEFII 1966          
BLAST of mRNA_M-pyrifera_M_contig7548.17807.1 vs. uniprot
Match: A0A7S1CDQ6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CDQ6_9STRA)

HSP 1 Score: 116 bits (290), Expect = 6.990e-26
Identity = 84/235 (35.74%), Postives = 112/235 (47.66%), Query Frame = 1
Query:   70 CRREMERLELAARLASLAATAEHRTRGSVVLRRLPPSHPQHARCLRAATQNVKPEFFSGESPYSAVKVLDIYKIENKYLLDKFQRAGKVKDSCKVKGLFCHVPDDSLEHVVLYGMGGGVRGDGGGGTVDADTATHRYDW----------DGDPIDLIWTNKGTSLRERAEIGGGGAASLRCHTTAANNRRATADGGVRLAKPLVFPRLFSRYGTLEEEREYANRAEEERGGAVSG 744
            CRR  E    +  L+  A   E  + G VVLRRL  +HPQ  RC RAA +NVK  FF     Y+ + VLD+ KIEN+ +L +FQ+A    +  KVKGLFC +P  +LE VV +GMG          +     A  R  W           G+ +DL    +GT+  E+ ++                     A   VR A  + FPR FSRY TLEE+RE    A +   GA +G
Sbjct:  217 CRRLEEHARASFDLSMFALHLEAESAGQVVLRRLASNHPQFLRCRRAALENVKAGFFRHAGRYTGITVLDVLKIENQIMLRRFQKAAAAAEPGKVKGLFCVLPRAALERVVAFGMGDAPP------SAAERAAVFRGTWMSAMANIASGGGEAVDLPAKLRGTNWAEQVDM---------------------AARRVRGADTVPFPRAFSRYSTLEEDRELVTGAADAPLGAAAG 424          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7548.17807.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L8R8_9PHAE3.550e-9248.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSF4_ECTSI1.210e-8946.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2WFR5_9STRA3.210e-3835.56Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A8J2X2L4_9STRA1.680e-3538.19Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A2R5GCW3_9STRA5.020e-3233.45Uncharacterized protein n=1 Tax=Hondaea fermentalg... [more]
A0A7S1UH08_9STRA3.250e-3134.04Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2W257_9STRA5.660e-3033.70Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
W2PZZ0_PHYPN6.730e-3033.67Uncharacterized protein n=10 Tax=Phytophthora TaxI... [more]
A0A329SBC3_9STRA1.350e-2934.64Uncharacterized protein n=1 Tax=Phytophthora cacto... [more]
A0A7S1CDQ6_9STRA6.990e-2635.74Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7548contigM-pyrifera_M_contig7548:4332..6076 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score292.0
Seed ortholog evalue3.3e-76
Seed eggNOG ortholog2880.D8LSF4
Hectar predicted targeting categoryother localisation
EggNOG OGs2DZTB@1,2S7A4@2759
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-21_003490.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size933
Cds size906
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7548.17807.1prot_M-pyrifera_M_contig7548.17807.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig7548 4332..6049 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816652.7156956-CDS-M-pyrifera_M_contig7548:4331..44351622816652.7156956-CDS-M-pyrifera_M_contig7548:4331..4435Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7548 4332..4435 -
1692278100.094627-CDS-M-pyrifera_M_contig7548:4331..44351692278100.094627-CDS-M-pyrifera_M_contig7548:4331..4435Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7548 4332..4435 -
1622816652.7271013-CDS-M-pyrifera_M_contig7548:4525..46251622816652.7271013-CDS-M-pyrifera_M_contig7548:4525..4625Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7548 4526..4625 -
1692278100.1068006-CDS-M-pyrifera_M_contig7548:4525..46251692278100.1068006-CDS-M-pyrifera_M_contig7548:4525..4625Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7548 4526..4625 -
1622816652.7387712-CDS-M-pyrifera_M_contig7548:4733..51741622816652.7387712-CDS-M-pyrifera_M_contig7548:4733..5174Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7548 4734..5174 -
1692278100.1163561-CDS-M-pyrifera_M_contig7548:4733..51741692278100.1163561-CDS-M-pyrifera_M_contig7548:4733..5174Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7548 4734..5174 -
1622816652.7508965-CDS-M-pyrifera_M_contig7548:5788..60491622816652.7508965-CDS-M-pyrifera_M_contig7548:5788..6049Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7548 5789..6049 -
1692278100.1268523-CDS-M-pyrifera_M_contig7548:5788..60491692278100.1268523-CDS-M-pyrifera_M_contig7548:5788..6049Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7548 5789..6049 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816652.7650218-UTR-M-pyrifera_M_contig7548:6049..60761622816652.7650218-UTR-M-pyrifera_M_contig7548:6049..6076Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7548 6050..6076 -
1692278100.13503-UTR-M-pyrifera_M_contig7548:6049..60761692278100.13503-UTR-M-pyrifera_M_contig7548:6049..6076Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7548 6050..6076 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig7548.17807.1

>prot_M-pyrifera_M_contig7548.17807.1 ID=prot_M-pyrifera_M_contig7548.17807.1|Name=mRNA_M-pyrifera_M_contig7548.17807.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=302bp
MAQEDAQTAAEAAHCRREMERLELAARLASLAATAEHRTRGSVVLRRLPP
SHPQHARCLRAATQNVKPEFFSGESPYSAVKVLDIYKIENKYLLDKFQRA
GKVKDSCKVKGLFCHVPDDSLEHVVLYGMGGGVRGDGGGGTVDADTATHR
YDWDGDPIDLIWTNKGTSLRERAEIGGGGAASLRCHTTAANNRRATADGG
VRLAKPLVFPRLFSRYGTLEEEREYANRAEEERGGAVSGLRLLALCRVMI
GSMCVSPSPSANRGAGGGQAEFDSVYFPREEEYLLLNETFVLPEFLVVHR
FA
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mRNA from alignment at M-pyrifera_M_contig7548:4332..6076-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig7548.17807.1 ID=mRNA_M-pyrifera_M_contig7548.17807.1|Name=mRNA_M-pyrifera_M_contig7548.17807.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1745bp|location=Sequence derived from alignment at M-pyrifera_M_contig7548:4332..6076- (Macrocystis pyrifera P11B4 male)
AGATTTGCGGCTGCAGCAAGCACCGAGATGGCGCAAGAAGACGCGCAGAC GGCAGCCGAGGCCGCCCACTGCAGGAGAGAAATGGAGCGCCTGGAGCTTG CGGCGAGGCTGGCTTCGCTGGCCGCCACCGCCGAGCATCGGACGCGAGGG AGCGTGGTGCTCAGGCGCCTGCCGCCATCTCACCCCCAGCACGCGCGCTG CCTCCGCGCGGCGACGCAGAACGTCAAGCCCGAGTTCTTCTCGGGCGAGT CGCCGTACAGTGCCGTGAAAGTGCTGGACATTTACAAGGTGCAGTCAGAC TGCTTTATACTGCCAGCAGCACACCACTCCGTCCCGAAATATCTAGGACC GTTTGGATAAAATATTAGTGGGAAAACTGTCATTATATTCCGGTACAGAA TGGTACGCATTGTGGTGGACAGCCTACTATGAATACTGTAGTACTTGTCT TTTGATTTTTTTTTTGTAGTAAAGGGGTTTGTATGTCAGGACAATGTACG ATGTAATTATTTTGTTTCGTCAGGTTGGCTTTGAAATATGCACCTTTGCC AGACTATGTAAACGAGTTTCGCGTGGGTCAGAGATGCGAACGATGCACGT AGATATCAGGAAATATAAGCAATAGTTGGGTTCTTATCATTGTGTAAAGT TATACTTACAACCGCTTCTGCGGTCGATCAGTGGGGGGGTTTGACTGCGT TCTCGTAGGATGCTGGAATTGCAACACTTCCCCTAGCTTTGACATCGCCT TGCAGCGTTCACCGCCAGAAAAAATGAGCTCGCCCATCCTTACTCTTCTT ACGGTCAACTGGAATATTGTTTGTCCCCAGCATGGTCGTCTGACAGTAGT GGTCGAACTCCCCGCGCTATTGCCCCCACGCCTTTCCCACCCGGACCCTC AGATTGAGAACAAGTACTTGTTGGACAAGTTTCAGCGCGCTGGCAAGGTA AAGGACTCCTGTAAGGTTAAAGGGCTCTTCTGCCACGTGCCCGACGACAG TCTAGAGCACGTCGTTTTGTACGGAATGGGTGGCGGTGTCCGGGGTGACG GAGGTGGCGGAACGGTTGATGCAGATACCGCCACACACCGGTACGACTGG GATGGTGATCCCATCGACCTTATCTGGACGAACAAGGGTACAAGTCTGAG GGAACGGGCGGAAATTGGAGGCGGTGGGGCGGCTAGTCTTAGGTGCCACA CCACCGCCGCCAACAATCGCAGGGCCACCGCTGATGGTGGAGTGAGGCTC GCCAAGCCCTTGGTGTTCCCGAGACTCTTCTCGCGTTACGGTACGCTTGA AGAGGAGCGCGAGTACGCCAACCGTGCTGAGGAGGAAAGGGGGGTGCGAA CAGGGTTATCGTCGCCGCTGGTCGTGACCTCAACGGCACCTCGGCCTGAC TCTCGACCCGGGCAGCGGCGAGCAGGTGACGAAGGGCGGGGGCGCGAAGA GGGGGCTGTCTCTGGGTTGCGGCTTCTTGCGCTTTGTCGCGTCATGATCG GAAGCATGTGCGTGTCTCCAAGCCCCTCGGCAAACCGCGGGGCTGGCGGT GGTCTACAACCGGCTGGCAACACCAGGGGCTCGCTGTCTACCGCGCAAGG CGATTCATTTCTGTGCCCTCCTTTGCCGTCACCCCCCCCAGGGCAGGCGG AGTTCGACTCGGTGTACTTCCCTCGCGAAGAGGAGTATCTCCTGCTCAAC GAGACCTTCGTTTTGCCAGAGTTCCTCGTGGTTCACCGGTTCGCC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig7548:4332..6076-

>mRNA_M-pyrifera_M_contig7548.17807.1 ID=mRNA_M-pyrifera_M_contig7548.17807.1|Name=mRNA_M-pyrifera_M_contig7548.17807.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1812bp|location=Sequence derived from alignment at M-pyrifera_M_contig7548:4332..6076- (Macrocystis pyrifera P11B4 male)
ATGGCGCAAGAAGACGCGCAGACGGCAGCCGAGGCCGCCCACTGCAGGAG
AGAAATGGAGCGCCTGGAGCTTGCGGCGAGGCTGGCTTCGCTGGCCGCCA
CCGCCGAGCATCGGACGCGAGGGAGCGTGGTGCTCAGGCGCCTGCCGCCA
TCTCACCCCCAGCACGCGCGCTGCCTCCGCGCGGCGACGCAGAACGTCAA
GCCCGAGTTCTTCTCGGGCGAGTCGCCGTACAGTGCCGTGAAAGTGCTGG
ACATTTACAAGATGGCGCAAGAAGACGCGCAGACGGCAGCCGAGGCCGCC
CACTGCAGGAGAGAAATGGAGCGCCTGGAGCTTGCGGCGAGGCTGGCTTC
GCTGGCCGCCACCGCCGAGCATCGGACGCGAGGGAGCGTGGTGCTCAGGC
GCCTGCCGCCATCTCACCCCCAGCACGCGCGCTGCCTCCGCGCGGCGACG
CAGAACGTCAAGCCCGAGTTCTTCTCGGGCGAGTCGCCGTACAGTGCCGT
GAAAGTGCTGGACATTTACAAGATTGAGAACAAGTACTTGTTGGACAAGT
TTCAGCGCGCTGGCAAGGTAAAGGACTCCTGTAAGGTTAAAGGGCTCTTC
TGCCACGTGCCCGACGACAGTCTAGAGCACGTCGTTTTGTACGGAATGGG
TGGCGGTGTCCGGGGTGACGGAGGTGGCGGAACGGTTGATGCAGATACCG
CCACACACCGGTACGACTGGGATGGTGATCCCATCGACCTTATCTGGACG
AACAAGGGTACAAGTCTGAGGGAACGGGCGGAAATTGGAGGCGGTGGGGC
GGCTAGTCTTAGGTGCCACACCACCGCCGCCAACAATCGCAGGGCCACCG
CTGATGGTGGAGTGAGGCTCGCCAAGCCCTTGGTGTTCCCGAGACTCTTC
TCGCGTTACGGTACGCTTGAAGAGGAGCGCGAGTACGCCAACCGTGCTGA
GGAGGAAAGGGGGATTGAGAACAAGTACTTGTTGGACAAGTTTCAGCGCG
CTGGCAAGGTAAAGGACTCCTGTAAGGTTAAAGGGCTCTTCTGCCACGTG
CCCGACGACAGTCTAGAGCACGTCGTTTTGTACGGAATGGGTGGCGGTGT
CCGGGGTGACGGAGGTGGCGGAACGGTTGATGCAGATACCGCCACACACC
GGTACGACTGGGATGGTGATCCCATCGACCTTATCTGGACGAACAAGGGT
ACAAGTCTGAGGGAACGGGCGGAAATTGGAGGCGGTGGGGCGGCTAGTCT
TAGGTGCCACACCACCGCCGCCAACAATCGCAGGGCCACCGCTGATGGTG
GAGTGAGGCTCGCCAAGCCCTTGGTGTTCCCGAGACTCTTCTCGCGTTAC
GGTACGCTTGAAGAGGAGCGCGAGTACGCCAACCGTGCTGAGGAGGAAAG
GGGGGGGGCTGTCTCTGGGTTGCGGCTTCTTGCGCTTTGTCGCGTCATGA
TCGGAAGCATGTGCGTGTCTCCAAGCCCCTCGGCAAACCGCGGGGCTGGC
GGTGGGGGCTGTCTCTGGGTTGCGGCTTCTTGCGCTTTGTCGCGTCATGA
TCGGAAGCATGTGCGTGTCTCCAAGCCCCTCGGCAAACCGCGGGGCTGGC
GGTGGGCAGGCGGAGTTCGACTCGGTGTACTTCCCTCGCGAAGAGGAGTA
TCTCCTGCTCAACGAGACCTTCGTTTTGCCAGAGTTCCTCGTGGTTCACC
GGTTCGCCGGCAGGCGGAGTTCGACTCGGTGTACTTCCCTCGCGAAGAGG
AGTATCTCCTGCTCAACGAGACCTTCGTTTTGCCAGAGTTCCTCGTGGTT
CACCGGTTCGCC
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