mRNA_M-pyrifera_M_contig7546.17802.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig7546.17802.1
Unique NamemRNA_M-pyrifera_M_contig7546.17802.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig7546.17802.1 vs. uniprot
Match: D7FUE1_ECTSI (Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUE1_ECTSI)

HSP 1 Score: 376 bits (965), Expect = 9.940e-123
Identity = 201/284 (70.77%), Postives = 217/284 (76.41%), Query Frame = 1 
Query:    7 RPVKQRSAEPRPRWEVLRMLNYLVIALFVCSITYVVFNYRTMSHAESGNGGLFPILVIWSGCMAYFFGFFGISFLDTNAMERSPSSFGLSHLDEQLYTSHSKHRDGSFVKASGKGGNKPPQAGSTMCSKETPQMAT------------------------VAKPPSPPAAPLGAIPEGEEYPDMTDEEVVACVVTGKLKDHQLEKKLGDHARAVVVRRTLFERRIGRSMENLPVQGYDYERIFGANCEIVCGYVPIPVGVVGPLMLNGSEVFVPMATTEASLSA 786
            RPVKQR AEPRPRWEVLR+LNYLVI LFVCSITYVVFNYRTMSHAE+GNGGLFPILVIWS CMAYFFGFFGISFLDT+AMERSPSSFGLSHLD  LY S  K R   F +   KG      +  TMC KETPQ+A+                               PA  LG +P+GE+Y  MTDEEV ACVVTGKLKDHQLEKKLGDHARAVVVRR+LFERRIGRSME+LPV+GYDYERIFGANCEIVCGY+PIPVG+VGPL LNG EV+VPMATTE  L A
Sbjct:   54 RPVKQRPAEPRPRWEVLRVLNYLVIGLFVCSITYVVFNYRTMSHAENGNGGLFPILVIWSVCMAYFFGFFGISFLDTSAMERSPSSFGLSHLDTHLYASERK-RAVQFAEPPAKGS----ASNGTMCGKETPQLASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPA--LGPVPDGEDYSTMTDEEVAACVVTGKLKDHQLEKKLGDHARAVVVRRSLFERRIGRSMESLPVEGYDYERIFGANCEIVCGYIPIPVGIVGPLTLNGQEVYVPMATTEGCLVA 330
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BLAST of mRNA_M-pyrifera_M_contig7546.17802.1 vs. uniprot
Match: A0A835YX65_9STRA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX65_9STRA)

HSP 1 Score: 231 bits (589), Expect = 8.520e-69
Identity = 129/265 (48.68%), Postives = 161/265 (60.75%), Query Frame = 1 
Query:   13 VKQRSAEPRPRWEVLRMLNYLVIALFVCSITYVVFNYRTMS---HAESGN--GGLFPILVIWSGCMAYFFGFFGISFLDTNAMERSPSSFGLSHLDEQLYTSHSKHRDGSFVKASGKGGNKPPQAGSTMCSKETPQMATVAKPPSPPAAPLGAIPEGEEYPDMTDEEVVACVVTGKLKDHQLEKKLGDHARAVVVRRTLFERRIGR--SMENLPVQGYDYERIFGANCEIVCGYVPIPVGVVGPLMLNGSEVFVPMATTEASLSA 786
             + R  EP PRWEVL +LNY V+ +F  S+ YV FNYR +S    A SG+  GGL+PIL++W GC+AYFFGFFG+SFLD  AM+RSPS+FGL HLD  L  S  + R                         +                 L A         ++DEEV   V++G +KDHQLE +LGDH RAV VRR +F  R+GR  ++  LP  GYDY R+FGANCEIVCGYVP+PVG+VGPL+L+G EV+VPMATTE  L A
Sbjct:   16 AEPRKPEPLPRWEVLSVLNYFVVGVFAASLAYVAFNYRAVSSDMQAGSGSKGGGLYPILLVWCGCLAYFFGFFGVSFLDKEAMQRSPSTFGLGHLDAGLAPSSPRARXXXXXXXXXXXXXXXXXXXXXXXXTD-----------------LAA---------LSDEEVAEAVLSGAVKDHQLEPRLGDHTRAVAVRRRVFAARLGRDDALRALPHAGYDYARVFGANCEIVCGYVPLPVGIVGPLLLDGREVYVPMATTEGCLVA 254
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BLAST of mRNA_M-pyrifera_M_contig7546.17802.1 vs. uniprot
Match: A0A7S3GVF0_9STRA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GVF0_9STRA)

HSP 1 Score: 195 bits (495), Expect = 1.600e-54
Identity = 120/290 (41.38%), Postives = 172/290 (59.31%), Query Frame = 1 
Query:    4 SRPVKQRSAEPRPRWEVLRMLNYLVIALFVCSITYVVFNYR-TMSHAESGNGGL----FPILVIWSGCMAYFFGFFGISFLDTNAMERSPSSFGLSHL---------DEQLYTSHSKHRD----GSFVKAS-----------GKGGNKPPQAGSTMCSKETPQMATVAKPPSPPAAPLGAIPEGEEYPDMTDEEVVACVVTGKLKDHQLEKKLGDHARAVVVRRTLFERRIGRSMENLPVQGYDYERIFGANCEIVCGYVPIPVGVVGPLMLNGSEVFVPMATTEASLSA 786
            S+P+K  S    P+W VL+ +N +V+A+FV SI Y+V NYR ++S        +    FP++V+WS C+AYFFGFFGISF+DT  +  SPS++GL H          +E+     +K +     GS   A            G G N P  A S     + P + +  +P + PA     I    ++  + DEEV+  ++TG LKD+QLEKKLGD+ RAV VRR+L+E  + + +  +P  GYDY ++FGANCEIV GYVP+P+G+ GPL++NG  V++PMATTE  L A
Sbjct:    8 SKPLKPAS---EPKWAVLQAMNVIVLAVFVGSIAYMVVNYRNSLSQPTESPSPITNMFFPMMVLWSCCLAYFFGFFGISFVDTKVLSESPSTYGLQHFPQPGESESEEEEPANQETKAKTNAPFGSLYVAPTHNTLSQNFTPGAGFNAP--ATSHTARSDGP-ICSDKRPATTPAVSADDI----DFTVLADEEVLGHLITGTLKDYQLEKKLGDYERAVAVRRSLYEHVLEKDLSLIPHTGYDYNKVFGANCEIVIGYVPLPLGLAGPLIINGEPVYIPMATTEGCLVA 287
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BLAST of mRNA_M-pyrifera_M_contig7546.17802.1 vs. uniprot
Match: A0A7S1CUQ8_9STRA (Hydroxymethylglutaryl-CoA reductase (NADPH) (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1CUQ8_9STRA)

HSP 1 Score: 149 bits (375), Expect = 7.060e-38
Identity = 101/267 (37.83%), Postives = 146/267 (54.68%), Query Frame = 1 
Query:    4 SRPVKQRSAEPRPRWEVLRMLNYLVIALFVCSITYVVFNYRTMSHAESGNGGLFPILVIWSGCMAYFFGFFGISFLDTNAMERSPSSFGLSHLDEQLYTSHSKHRDGSFVKASGKGGNKPPQAGSTMCSKETPQMATVAKPPSPPAAPLGAIPEGEEYPDMTDEEVVACVVTGKLKDHQLEKKLGDHARAVVVRRTLFERRI-----GRSMENLPVQ-GYDYERIFGANCEIVCGYVPIPVGVVGPLMLNGSEVFVPMATTEASLSA 786
            ++PV   S EP+P+W +LR+ NY+V   F+ S+     N  T     +    L   L+IWS  M YFFGFFGISF++ + +E  P +     L + + T  S       VK        PP + + +C+  T       K PSP      +IP   +  ++++ E+ + V+  K+KDHQLEK L  H RAV VRR   + ++     G ++  LP +   DY+R+ GANCEIV GY+PIPVG+ GP+ LNG  V++PMATTE  L A
Sbjct:   74 AKPVSS-SDEPQPKWHILRLTNYVVTFGFLLSVLKFASNATTYLDDSTS---LLQFLIIWSISMCYFFGFFGISFIELDELESEPQNHQHQMLRKPMPTKESAEPPVKVVKMH------PPASSAPVCTDPT-----SFKKPSP------SIPANIK--ELSNGEIASLVLQDKVKDHQLEKLLDPH-RAVEVRRLKVDNQLDSLGRGGALAELPHKHDLDYKRVLGANCEIVVGYIPIPVGMAGPITLNGESVYIPMATTEGCLVA 316
[Close]
BLAST of mRNA_M-pyrifera_M_contig7546.17802.1 vs. uniprot
Match: A0A7S4ALR6_9STRA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ALR6_9STRA)

HSP 1 Score: 145 bits (365), Expect = 4.910e-36
Identity = 96/264 (36.36%), Postives = 140/264 (53.03%), Query Frame = 1 
Query:   28 AEPRPRWEVLRMLNYLVIALFVCSITYVVFNYRTMSHAESGNGGLFPILVIWSGCMAYFFGFFGISFLDTNAMERSPSSFGLSHLDEQLYTSHSKHRDGSFVKASGKGGNKPPQAGSTMCSKETPQMATVAKPPSPPAAPLGAIPEGEEYPDMTDEEVVACVVTGKLKDHQLEKKLGDHARAVVVRRTLFERRI----GRSMEN------LPVQ-GYDYERIFGANCEIVCGYVPIPVGVVGPLMLNGSEVFVPMATTEASLSA 786
            A  +P+W + + +N++ +A F+CS+     N     H ES  G L   LV WS  + YFFGFFG+SF+  +              ++ L T++  H        S K    PP A + +CS           P S  ++ + ++P+  +  ++ DEE+   V++ K+KDH LEK L D  RAV VRR    +++    GR  +N      LP +   DY R+ GANCEIV GY+P+PVG+VGPL +NG  V+VPMATTE  L A
Sbjct:   75 AGKQPKWHIFKWINFVAVAAFLCSVFTFCSNASQYLHDES-QGVLVQFLVGWSVFLMYFFGFFGVSFIHEDIPREEVDVIPSKPQNKSLSTNNISHNKNKNNSISNKKSVHPPAACAPVCSD----------PSSFRSSKVASLPD--DLKELGDEEIANLVLSNKIKDHMLEKLL-DPFRAVTVRRIACNQKLASVHGRDQQNGNVLDKLPSEPSLDYSRVHGANCEIVVGYIPLPVGLVGPLTINGESVYVPMATTEGCLVA 324
[Close]
BLAST of mRNA_M-pyrifera_M_contig7546.17802.1 vs. uniprot
Match: A0A7S4W3S1_9STRA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W3S1_9STRA)

HSP 1 Score: 140 bits (354), Expect = 1.400e-34
Identity = 97/276 (35.14%), Postives = 142/276 (51.45%), Query Frame = 1 
Query:    4 SRPVKQRSAE-PRPRWEVLRMLNYLVIALFVCSITYVVFNYRTMSHAESGNGGLFPILVIWSGCMAYFFGFFGISFLDTNAMERSPSSFGLSHLDEQLYTSHSKHRDGSFVKASGKGGNKPPQAGSTMCSKETPQMATVAKPPSPPAAPLGAIPEGEEYPDMT--------DEEVVACVVTGKLKDHQLEKKLGDHARAVVVRRTLFERRI-----GRSMENLPV-QGYDYERIFGANCEIVCGYVPIPVGVVGPLMLNGSEVFVPMATTEASLSA 786
            S P+K+ + + P P+W +L++LNY  ++ F+ S+          S   + +  LF  L  WS  + YFFGFFGISF+D + +           ++ Q + S  +                            T   +    PP+  + P+  +P   E P ++        +EE+   V+TG++KDHQLEK L DH RAV VRR  F+ ++     G ++ +LP     DY R+FGANCEIV GYVP+PVG+VGPL LNG  V++PMATTE  L A
Sbjct:   67 STPLKKITRQGPEPKWHILKILNYAAVSSFLVSVGCFA---SDASRHMNDSSSLFKFLFGWSFFLCYFFGFFGISFVDADEI-----------MEGQNFESSER---------------------------STSSKSKAVHPPAE-STPVCTVPSSFEKPSLSKTDLQSKSNEELSNMVLTGQIKDHQLEKLL-DHHRAVDVRRLAFDSKLSSVGCGGALTDLPSGPSLDYSRVFGANCEIVVGYVPLPVGMVGPLTLNGRSVYIPMATTEGCLVA 299
[Close]
BLAST of mRNA_M-pyrifera_M_contig7546.17802.1 vs. uniprot
Match: A0A7S1Y0Q7_9STRA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1Y0Q7_9STRA)

HSP 1 Score: 134 bits (337), Expect = 6.160e-33
Identity = 75/128 (58.59%), Postives = 87/128 (67.97%), Query Frame = 1 
Query:  430 SPPAAPLGAIPEGE-------EYPDMTDEEVVACVVTGKLKDHQLEKKLGDHARAVVVRRTLFERRIGRS--MENLPVQGYDYERIFGANCEIVCGYVPIPVGVVGPLMLNGSEVFVPMATTEASLSA 786
            +P AA   A P G        E   + DEE+V  V  G +KDH LEKKLGD  RAV VRRTL+ERR+G +   E LPV  +DYERIFGANCEIV GYVP+P GVVGPL+L+G  V+VPMATTE  L A
Sbjct:    3 APAAAATKAAPAGRPADISAAELAVLPDEELVRMVEAGAIKDHALEKKLGDFNRAVKVRRTLYERRMGNAGVFEKLPVDHFDYERIFGANCEIVVGYVPLPCGVVGPLLLDGEPVYVPMATTEGCLVA 130
[Close]
BLAST of mRNA_M-pyrifera_M_contig7546.17802.1 vs. uniprot
Match: A0A7S2EB74_TRICV (3-hydroxy-3-methylglutaryl coenzyme A reductase (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EB74_TRICV)

HSP 1 Score: 133 bits (334), Expect = 1.010e-31
Identity = 103/269 (38.29%), Postives = 135/269 (50.19%), Query Frame = 1 
Query:   40 PRWEVLRMLNYLVIALFVCSITYVVFNYRTMSHAESGNGGLFPILVIWSGCMAYFFGFFGISFLDTNAMERSPSSFGLSHLDEQLYTSHSKHRDGSFVKASGKG----GNKPPQAGSTMCSKETPQMATVAKPPSPPAAPLGAIPEGE----------EYPDMTDEEVVACVVTGKLKDHQLEKKLGDHARAVVVRRTLFERRI-----GRSMENLPVQ-GYDYERIFGANCEIVCGYVPIPVGVVGPLMLNGSEVFVPMATTEASLSA 786
            P+W VL+ LN +    F+ S+          S   S +  L   + IWS  + YFFGFFGISF+D           G S   E+  T+                    G K   AGS     E PQ A +  PP+P +AP+ + P                 M D E+ A V++G +KDHQLEK L   ARAV VRR +FER++     G +++ LP +   DY R+ GANCEIV GYVP+P GV+GPL L+G  V+VPMATTE  L A
Sbjct:   99 PKWGVLKALNVVAALAFLFSVIRFA---SDASRHMSDSTSLLKFMSIWSALLCYFFGFFGISFVDAE---------GFSVAGEETKTTEXXXXXXXXXXXXXXXXXGPGKKTAPAGSRSI-PEKPQHANL-HPPAP-SAPVCSDPTSRAPITKKALPPNLQGMPDNEIAALVLSGVVKDHQLEKLLSP-ARAVPVRRIVFERKLSSLNRGGALDELPHEPSLDYGRVHGANCEIVVGYVPLPCGVIGPLTLDGETVYVPMATTEGCLVA 351
[Close]
BLAST of mRNA_M-pyrifera_M_contig7546.17802.1 vs. uniprot
Match: A0A7S1YA95_9STRA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YA95_9STRA)

HSP 1 Score: 133 bits (334), Expect = 1.020e-31
Identity = 102/259 (39.38%), Postives = 131/259 (50.58%), Query Frame = 1 
Query:   40 PRWEVLRMLNYLVIALFVCSITYVVFNYRTMSHAES---GNGGLFPILVIWSGCMAYFFGFFGISFLDTNAMERSPSSFGLSHLDEQLYTSHSKHRDGSFVKASGKGGNKPPQAGSTMCSKETPQMATVAKPPSPPAAPLGAIPEGEEYPDMTDEEVVACVVTGKLKDHQLEKKLGDHARAVVVRRTLFERRI---GRS---MENLPVQ-GYDYERIFGANCEIVCGYVPIPVGVVGPLMLNGSEVFVPMATTEASLSA 786
            P+W VLR LNY  I  F+ S+      Y    H E     +G +   L  WS  + YFFGFFGISF+DT+ +                       R    V A+ K    PP A + +CS      A V K  +     L  I       D+  E+V   V+ GKLKDH+LEK+L  H RAV VRR +  +++   GR    ++ LP Q   DY ++ GANCEIV GYVP+PVG+VGPL LN   V+VPMATTE  L A
Sbjct:  104 PKWFVLRWLNYAAIVGFIYSV------YTFALHLEDYLQDSGAMLGFLTGWSLFLCYFFGFFGISFVDTDDLLXXXXXXXXXXXXXXXXXXXXXXRG---VIAATKPALHPPAASTPVCSDRN-SSAVVNKTSTKKGMDLTGI------ADLPIEQVGQLVLDGKLKDHELEKRLDAH-RAVSVRRWIVNQKLASLGRPADVLDKLPYQTDLDYSKVHGANCEIVVGYVPLPVGIVGPLTLNDESVYVPMATTEGCLVA 345
[Close]
BLAST of mRNA_M-pyrifera_M_contig7546.17802.1 vs. uniprot
Match: A0A7S2NUX1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NUX1_9STRA)

HSP 1 Score: 124 bits (310), Expect = 1.280e-30
Identity = 85/249 (34.14%), Postives = 131/249 (52.61%), Query Frame = 1 
Query:   67 NYLVIALFVCSITYVVFNYRTMSHAESGNGGLFPILVIWSGCMAYFFGFFGISFLDTN--AMERSPSSFGLSHLDEQLYTSHSKHRDGSFVKASGKGGNKPPQAGSTMCS-KETPQMATVAKPPSPPAAPLGAIPEGEEYPDMTDEEVVACVVTGKLKDHQLEKKLGDHARAVVVRRTLFERRIG-----RSMENLPVQ-GYDYERIFGANCEIVCGYVPIPVGVVGPLMLNGSEVFVPMATTEASLSA 786
            NY  +A F  S+ + +       + ++    +  ++  W+  + YFFGFFG+SF+DT+      SP+   +S +     +  +       +         PP     +CS K   + A  +   +P      ++    +   MT+EE+   V+T K+KDHQLE KL    RAV +RR +FE+++      +S++ LP +    YER+FGANCEIV GYVP+PVG+VGP  LNG  V++PMATTE  L A
Sbjct:    1 NYTAVATFSTSVLHFILYSDVYMNNDAQ---MMKLMGAWTLFVLYFFGFFGVSFVDTDDHLEGSSPAEDEISEMTADQASPSAVVAVAKQMPVKAAAPIHPPXXXXPVCSDKNLTKDALTSSSATPAVKKSSSL--SLDLQSMTNEELADLVLTNKMKDHQLETKLNP-TRAVPIRRLVFEKKLASLGHAKSLDELPYEHSLSYERVFGANCEIVVGYVPLPVGMVGPCTLNGESVYIPMATTEGCLVA 243
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7546.17802.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUE1_ECTSI9.940e-12370.77Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Ta... [more]
A0A835YX65_9STRA8.520e-6948.683-hydroxy-3-methylglutaryl coenzyme A reductase n=... [more]
A0A7S3GVF0_9STRA1.600e-5441.383-hydroxy-3-methylglutaryl coenzyme A reductase n=... [more]
A0A7S1CUQ8_9STRA7.060e-3837.83Hydroxymethylglutaryl-CoA reductase (NADPH) (Fragm... [more]
A0A7S4ALR6_9STRA4.910e-3636.363-hydroxy-3-methylglutaryl coenzyme A reductase n=... [more]
A0A7S4W3S1_9STRA1.400e-3435.143-hydroxy-3-methylglutaryl coenzyme A reductase n=... [more]
A0A7S1Y0Q7_9STRA6.160e-3358.593-hydroxy-3-methylglutaryl coenzyme A reductase n=... [more]
A0A7S2EB74_TRICV1.010e-3138.293-hydroxy-3-methylglutaryl coenzyme A reductase (F... [more]
A0A7S1YA95_9STRA1.020e-3139.383-hydroxy-3-methylglutaryl coenzyme A reductase n=... [more]
A0A7S2NUX1_9STRA1.280e-3034.14Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7546contigM-pyrifera_M_contig7546:5695..11322 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score380.2
Seed ortholog evalue8e-103
Seed eggNOG ortholog2880.D7FUE1
Preferred nameHMGR
KEGG rclassRC00004,RC00644
KEGG koko:K00021
KEGG ReactionR02082
KEGG Pathwayko00900,ko01100,ko01110,ko01130,ko04152,ko04976,map00900,map01100,map01110,map01130,map04152,map04976
KEGG ModuleM00095
Hectar predicted targeting categorysignal anchor
EggNOG free text desc.hydroxymethylglutaryl-CoA reductase (NADPH) activity
EggNOG OGsCOG1257@1,KOG2480@2759
EC1.1.1.34
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons5
Model size795
Cds size795
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7546.17802.1prot_M-pyrifera_M_contig7546.17802.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig7546 5695..11322 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816652.4408126-CDS-M-pyrifera_M_contig7546:5694..58761622816652.4408126-CDS-M-pyrifera_M_contig7546:5694..5876Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7546 5695..5876 +
1692278099.9350448-CDS-M-pyrifera_M_contig7546:5694..58761692278099.9350448-CDS-M-pyrifera_M_contig7546:5694..5876Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7546 5695..5876 +
1622816652.4525323-CDS-M-pyrifera_M_contig7546:8540..87101622816652.4525323-CDS-M-pyrifera_M_contig7546:8540..8710Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7546 8541..8710 +
1692278099.9524832-CDS-M-pyrifera_M_contig7546:8540..87101692278099.9524832-CDS-M-pyrifera_M_contig7546:8540..8710Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7546 8541..8710 +
1622816652.4669573-CDS-M-pyrifera_M_contig7546:9913..100591622816652.4669573-CDS-M-pyrifera_M_contig7546:9913..10059Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7546 9914..10059 +
1692278099.9645565-CDS-M-pyrifera_M_contig7546:9913..100591692278099.9645565-CDS-M-pyrifera_M_contig7546:9913..10059Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7546 9914..10059 +
1622816652.4796185-CDS-M-pyrifera_M_contig7546:10742..108831622816652.4796185-CDS-M-pyrifera_M_contig7546:10742..10883Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7546 10743..10883 +
1692278099.9725058-CDS-M-pyrifera_M_contig7546:10742..108831692278099.9725058-CDS-M-pyrifera_M_contig7546:10742..10883Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7546 10743..10883 +
1622816652.490362-CDS-M-pyrifera_M_contig7546:11166..113221622816652.490362-CDS-M-pyrifera_M_contig7546:11166..11322Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7546 11167..11322 +
1692278099.9804692-CDS-M-pyrifera_M_contig7546:11166..113221692278099.9804692-CDS-M-pyrifera_M_contig7546:11166..11322Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7546 11167..11322 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig7546.17802.1

>prot_M-pyrifera_M_contig7546.17802.1 ID=prot_M-pyrifera_M_contig7546.17802.1|Name=mRNA_M-pyrifera_M_contig7546.17802.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=265bp
MSRPVKQRSAEPRPRWEVLRMLNYLVIALFVCSITYVVFNYRTMSHAESG
NGGLFPILVIWSGCMAYFFGFFGISFLDTNAMERSPSSFGLSHLDEQLYT
SHSKHRDGSFVKASGKGGNKPPQAGSTMCSKETPQMATVAKPPSPPAAPL
GAIPEGEEYPDMTDEEVVACVVTGKLKDHQLEKKLGDHARAVVVRRTLFE
RRIGRSMENLPVQGYDYERIFGANCEIVCGYVPIPVGVVGPLMLNGSEVF
VPMATTEASLSAEG*
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mRNA from alignment at M-pyrifera_M_contig7546:5695..11322+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig7546.17802.1 ID=mRNA_M-pyrifera_M_contig7546.17802.1|Name=mRNA_M-pyrifera_M_contig7546.17802.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5628bp|location=Sequence derived from alignment at M-pyrifera_M_contig7546:5695..11322+ (Macrocystis pyrifera P11B4 male)
ATGTCCAGGCCGGTGAAGCAGCGGTCGGCGGAACCGAGGCCGCGATGGGA
GGTGCTCCGCATGCTCAACTACCTCGTGATCGCGCTGTTCGTGTGCTCGA
TCACGTACGTGGTCTTCAACTACCGGACCATGAGCCACGCGGAGAGCGGA
AACGGCGGGCTGTTCCCGATCCTCGTCATCTGGTGAGGATGAGGACCAAA
TATGCCACCAGTACTACGCAACTCTTTTAGTACCGCACTGCGCATAAACC
TCAATCTCACTCTAGTTTCAAGTGTTTTGTCCCCACAACGGGGGTGCAGT
CCTGAAGGGGTTAGTTTATGGTTGACCGCGGTTTGACCCCGTGACTGACC
GCCCGCATACACTAAAACACAGCATGATAAGGCCACGAGCGGCCTTGACG
CGCGAAACGATGCTGTTGTAGAATACCGCGGTTTGATACTTTGACTGACC
TCCTTCATACACTAAAAACAGTGTGATGAGACCGCAAGAGGCCTTGACGC
GCCCGAATGTAATATCAGTGGGAGACCGTGGTTTGGCCCCTTGACTGACC
GGCCCCCCTACACGAAAACTGTGCCAGGTATAGTATAGTCACTTCAAGAG
GCCTCGACGCGCCCAAGAATACTATGAGAGACTGCGGTTTGACCCCTTCC
TTGACTGACCGCCCTTGTACACTAGAAACAGTGTACTAAAGCCACAAGAG
GCCTTGACGCGCCCAAAGATACTAGTAGTAGGAGACCGCGGTTTGGCCGC
TTGACTGCACTTTAAATAGTTTAGTGTTGCCACAAGGAACCTTGACGCGT
CCAAAGATGCTACCGGATATACTGTTTGTGGGATACCGCGGTTCGACCCC
TTGACTGACCGACCCCCTGCACTAAATCTATTGTAGTATTAAGTAAGGCC
ACAATGGGCCTTTGCCCTTTTCGGATTGCAGTCCGGTTTTGAAACTACTT
GGAATTTGAGTGGTTTGTCCTCAAGACGGGACTGCAGTACTATTACGGAG
GACCATAGTAAATAGGACCTACGGTACACACAAAACCTATTATATATTTC
CCTATTTTTACTAGCAATATTTGGTCTTGTTAACTATGGCCCCCAGCACT
AACAGCGCTAAAGAGTTAACTCGCTCGACAAGAAGAAAGTATGGTCTCTA
CTATGAACAGCATCGCTGTGCTTTTGCTTGACGCCATGACTGACCGCCCA
CTTACACTAAAATTAGTAATATGAACGGTAAGGCAAAAAGAGGCCTTGAC
GCGCCCAAAAAGACCGGTCTCCTTGCGATACGATATTTTGTTAGGGACTC
GGGAGGGGTGGGGTGGGGTGGGGTGGCCGCCCCCCCCCCTACACCGTGTA
CGGTAGTGGTCCCTCTATTGTGCCAGTATCATTGGCAAGCCAACCGGCAC
TGTATTGTAGAGCCAACCGGCACTATATTGTAGAGCCAACCGGCACTATA
TACTCCGCACACTGCCACACTGGTGAATCTCATCTGTGACAAGCGATTCA
ACAGGCACTATAGAGGGACCACTACCGCTGCACTCGTGGCTACGATGATG
TATTAAGGCCAGAATAGGACTTGACACGCCCAAAATAAACGGTCGGCTTG
GCTTCTTTCGTGAGCACTCGGGAGGGGTTGGGTGGGGTAAGCGAGGAGGG
GGGTGGAGGCGTGCTGCTGTCGTCAGACTCGACCATGGGGTGTATGGCCT
ACTTTTTTCCCCCCCCCCCCCCCCGGCCATACGACTACGGCCATGTATGA
GATCGAGTACATCTCTCTTATCGAGTACACCCCCCCGGCCTTGAGTGGAG
AGGTTCAGCAGGCCGAGCGCCCCACCAAATACCCCCCACCCACTTTGACA
ATGTGCGTGCTCGTTGGCAGAATGATGCTGTCGGGCCCTCATCCTCCCCC
CCCCTCCGCCTTAATTCGAAATGCTTCCATACGTTGAGCGCACAAAATAA
ATTTGTTTTTCATAGATGAGTGGTACGGTCGGGGTAGCTCCTAGTGATTC
GGGGGCGTTTCACTTGTTTCTGTGACATTTAAGAACAATTGGAAGCTGAG
GCCCATACACAATCAATTACATGGGCTATGTACTACGGGGGGGGGGTAAT
TTTCAGACCCCACGGTGCACCCAAAAATCAATATATCCCAATGTTCGTGT
AGTTGATGTTGAGTTTTGATTACTGTTACGGGGGTCCATAGTTAATAGGA
CCTATGATACACATAAAAACCTATATATTTACCTGTTTTTACTAGCAATA
TTTGGTCCTATTTACTATGGCCCCCCATAATATGTTCCTACGTACTGTAG
TATTTATCTAACGAAGATATGGGGTGAAGTTCACATGGAACCCTATTAGT
GTTGGATAGATCCCGTAATCATATTATTTTACGCTCAGAAATGCAAGAAC
CCTTACTATTACCTACGGGGGCCACAGTAAATAGGACCAAATATCGTTAG
TAAAAATAGGGAAGTATATACGTTATTGCGCATACCGTAGGTCCTATATA
CTATGATCCTCCGTAATACCAGTAGTGTATAACGTATATACTGTAGCACG
GCTCGATGTTGGGTTTCTACACACCCGGTACATTGGGTTCTTCGCTGCCT
TTCGGTTCCGTCGCTCCCCCCTCCTTTGTTGGAAACTCTTCTTTTATGTC
TGGCACACTTATTCGATAGGTCCGAGTGCATGGCGTCCTTATTCGCCGAA
CGATTCCGTTGACTCCGGACATGCTCCGTCCCTACGCTGCAGGGATGCGA
GAGTCTATGGCCATGCGACTACGACCATGCATGACGTGAGATGCCCCCCC
CCCTCCCCCCACCCCCGCTTGTTCGAAACGCTTGCTGAGTGGACAGGTCC
GGGTGCATGGCGTACTTTTTCGGGTTCTTCGGCATCTCGTTCTTGGACAC
GAACGCCATGGAACGCAGCCCTTCTTCTTTTGGGCTGTCCCACCTCGACG
AGCAGCTGTACACGTCGCACAGCAAGCACCGCGACGGGAGCTTTGTGAAG
GCTTCGGGAAAGGGAGGTGAGAAGAGAAGAGAGGAGACGAGGCGCTCCCC
GCTGTCATCGGCCCAGGTTGTTGCTGCTGTTCGTTGTTGGGTTTTTTTTT
TTCTCCTTTTAGCTTCTGTTTGTCCCATCATTGCACCTCTTCTGGATCGT
CATCGCGCCCGGGCTCTGATCGCGTTGGTCGTCTCTCCCCACTTCGAATA
CGATTTTGTTTTACCACTATGCTTGCTGTGCTACCAAATTTGCCCTGTAA
CACGCGCGATGAGATAGCAAACCCCCCTCCGACGTATTTTTTCATAGCTG
ATTTCCTCCACAACGGGAAGAGCGCTAACCCCGAGCGACGCGTTTATGGA
AAATGATCTCGACGAGATCTTCCCAAAACCGCCTTTTTCGTTGGGTACTC
CCCCCTTAAGGCATGTTGTGGAGAGAAAATAAGGTTTGAAATTCGTCGGG
AGGTGTTCATTATATTCGCGTATTGTTAATAGACGGTATAATACTGCCAA
AATTACCGCACAATCGTAGTTCCAAGTAGTTTGTCCCCTAATCGCGGGGT
TTCAGTTTTGAGGGCGTTTTACAACCCGTTTAGAACTGCCGCCACGTTTT
TTTTAATCAAAATTGATCCCTTTTCACCTTTTTTACCGTTACGAAAATTA
TCCCACACTAATTCCAAGTATGTGTTTCTCCCTCCCACCCTCTTCTGGGC
CTTCGTATAAATATACGCACTCTAATCGTGTCCATCGTCACCCCCGTGTC
CCCTGTCCCCCCAGACAACAAGCCTCCCCAGGTGGGGGGCACCATGTGTT
CTAAAAAAACGCCCCCCCCCCCACATTCGACGCTGCCATCCACATGCAAG
AAAATCGGCCTCATACGCGGTTTTTAGTAGTATGCAGGTCACCCTTCATG
CGAGTCGCCGAACACCTCTCGGCGCTTCACGCTTGGTGCAGGCAATGTCT
GTCTGGTCGGTGAAAACCCGATGTGCCCCGTCCCAACATTGCAGGGATGA
ATTACAGGGTCTATAACCATACGACTACGGCCATGCATGGCATGAAAACA
CCCCCGCCCCATCTGCCATCAATCGGCCCAAGGTTTGCTTGTGTACTTCT
TGTTTCACGTTGCTCCCTCCCAAGCTCTTTTGGACCATCATTGCATGCAA
ACTCTGATCGTGGCCGTTACGTCTCCGTGTCCCGGTTTCCCCTTGTCCCC
GCATCCCCTGTCCCTTCAGGCAACAAGCCTCCCCAGGCGGGGAGCACCAT
GTGCTCTAAAGAAACGCCTCAGATGGCGACCGTGGCGAAACCCCCGTCTC
CCCCTGCGGCTCCTTTGGGGGCTATCCCGGAAGGGGAGGAGTACCCGGAC
ATGACCGACGAAGAGGTAAGAGGGGCAGGGATAGCCGACGCATGCTCTGC
ACGATTGGAGTGCACCTACATTTGGTGAGGCCTTTTGCTTTGAGGGGGCA
CCCTGTTCCTCACCGAAACAATGACTTTCAGGAACATGAAAGTGCAAAAC
TTGATGAACTATCCCACCGTCTAGGTTTACAGCGATAAGGCATGCCTTAT
TCCAGCGATAATGCGTGCCCTATTGGATAAATCCTTCGTTGAGGAGTGTA
TTATTACGGGGGGCCATAGTAAAGAGGTCCTACGGTACACACAAAAATCT
ATATATTTACCTGTTTTTACCAACAATATTTGGTCCTATTTAATATGTCC
CCCGTAGTAGTCAGTCAAGAACATTTGCCTTGCAAGGGAAATCGTGATAC
CCCTACTGTAAGTTGCTGCAACGCCGAGGGTGAACTACTGTAGTATGCCT
CTCGGCACATCGTTTGTCGGTTTATTGTACAGTCGTATTTCCTCCCTCTT
TGCTGTCTTCCTTCCCCCTTTCTCCTTCTGTGAAGAGGTTTGTGTTGGTG
GTGATGTTTTGTTGTGGGGGTGTTGTTGTTGTTGCTATTGGTTGCTGTCG
TGGTTGCTGCTGTTGTTGTTGCTGCTGATGCTTCTGCTCCTATTGCAGTT
GCTGACGTTTTGGTATCATGTGTTTCGTTTGTGCGCGTTTGTTTCTAGGT
TGTGGCGTGCGTGGTGACAGGCAAGCTTAAGGACCACCAGCTGGAGAAGA
AGCTCGGTGACCACGCTCGCGCAGTGGTCGTGCGGCGCACCTTGTTCGAG
AGGCGCATCGGCCGATCGATGGAGAACCTCCCCGTACAGGTGAAGCATAG
GAAACGCCCCCTTTATTGGAAACCTTCGCCATAGCATGGAAACGCCTATT
ATCACTAGAAACATTTGCCATATACATGGAAACGGAAGAAACATTTGCCA
AAGGCATGGAAACGGCTTTTCTCACTATTAATAACATTTCTCTTAGGCAT
GAAACCTATTATCACAATTTGCCATGTGCGGCATTGAAACGCCTATTCTC
ACTACAAATCTTGGACAAAATGAACCACGGCTGTAACTGCTGGCCCTTTT
CTCGCTGTTTTTTACTGCTCAGGGGTACGATTACGAGCGCATCTTCGGCG
CCAACTGCGAGATCGTTTGCGGTTACGTTCCCATCCCCGTCGGAGTCGTT
GGACCCCTCATGCTCAACGGCTCTGAGGTCTTCGTTCCCATGGCCACCAC
AGAGGCGAGTCTGTCGGCAGAAGGATAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig7546:5695..11322+

>mRNA_M-pyrifera_M_contig7546.17802.1 ID=mRNA_M-pyrifera_M_contig7546.17802.1|Name=mRNA_M-pyrifera_M_contig7546.17802.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1590bp|location=Sequence derived from alignment at M-pyrifera_M_contig7546:5695..11322+ (Macrocystis pyrifera P11B4 male)
ATGTCCAGGCCGGTGAAGCAGCGGTCGGCGGAACCGAGGCCGCGATGGGA
GGTGCTCCGCATGCTCAACTACCTCGTGATCGCGCTGTTCGTGTGCTCGA
TCACGTACGTGGTCTTCAACTACCGGACCATGAGCCACGCGGAGAGCGGA
AACGGCGGGCTGTTCCCGATCCTCGTCATCTGATGTCCAGGCCGGTGAAG
CAGCGGTCGGCGGAACCGAGGCCGCGATGGGAGGTGCTCCGCATGCTCAA
CTACCTCGTGATCGCGCTGTTCGTGTGCTCGATCACGTACGTGGTCTTCA
ACTACCGGACCATGAGCCACGCGGAGAGCGGAAACGGCGGGCTGTTCCCG
ATCCTCGTCATCTGGTCCGGGTGCATGGCGTACTTTTTCGGGTTCTTCGG
CATCTCGTTCTTGGACACGAACGCCATGGAACGCAGCCCTTCTTCTTTTG
GGCTGTCCCACCTCGACGAGCAGCTGTACACGTCGCACAGCAAGCACCGC
GACGGGAGCTTTGTGAAGGCTTCGGGAAAGGGAGGTCCGGGTGCATGGCG
TACTTTTTCGGGTTCTTCGGCATCTCGTTCTTGGACACGAACGCCATGGA
ACGCAGCCCTTCTTCTTTTGGGCTGTCCCACCTCGACGAGCAGCTGTACA
CGTCGCACAGCAAGCACCGCGACGGGAGCTTTGTGAAGGCTTCGGGAAAG
GGAGGCAACAAGCCTCCCCAGGCGGGGAGCACCATGTGCTCTAAAGAAAC
GCCTCAGATGGCGACCGTGGCGAAACCCCCGTCTCCCCCTGCGGCTCCTT
TGGGGGCTATCCCGGAAGGGGAGGAGTACCCGGACATGACCGACGAAGAG
GCAACAAGCCTCCCCAGGCGGGGAGCACCATGTGCTCTAAAGAAACGCCT
CAGATGGCGACCGTGGCGAAACCCCCGTCTCCCCCTGCGGCTCCTTTGGG
GGCTATCCCGGAAGGGGAGGAGTACCCGGACATGACCGACGAAGAGGTTG
TGGCGTGCGTGGTGACAGGCAAGCTTAAGGACCACCAGCTGGAGAAGAAG
CTCGGTGACCACGCTCGCGCAGTGGTCGTGCGGCGCACCTTGTTCGAGAG
GCGCATCGGCCGATCGATGGAGAACCTCCCCGTACAGGTTGTGGCGTGCG
TGGTGACAGGCAAGCTTAAGGACCACCAGCTGGAGAAGAAGCTCGGTGAC
CACGCTCGCGCAGTGGTCGTGCGGCGCACCTTGTTCGAGAGGCGCATCGG
CCGATCGATGGAGAACCTCCCCGTACAGGGGTACGATTACGAGCGCATCT
TCGGCGCCAACTGCGAGATCGTTTGCGGTTACGTTCCCATCCCCGTCGGA
GTCGTTGGACCCCTCATGCTCAACGGCTCTGAGGTCTTCGTTCCCATGGC
CACCACAGAGGCGAGTCTGTCGGCAGAAGGATAGGGGTACGATTACGAGC
GCATCTTCGGCGCCAACTGCGAGATCGTTTGCGGTTACGTTCCCATCCCC
GTCGGAGTCGTTGGACCCCTCATGCTCAACGGCTCTGAGGTCTTCGTTCC
CATGGCCACCACAGAGGCGAGTCTGTCGGCAGAAGGATAG
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