mRNA_M-pyrifera_M_contig75379.17792.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig75379.17792.1 vs. uniprot
Match: A0A7S3AXK5_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AXK5_9EUKA) HSP 1 Score: 95.5 bits (236), Expect = 1.160e-20 Identity = 72/200 (36.00%), Postives = 98/200 (49.00%), Query Frame = 1 Query: 1 LIGTQSRGLSMARTLGSASPNQVTVSGRRVLIGW----------LSGATAVQSLPRDLTISKHGELLQAFVPELGVLRASPTPLPPSGSPANASLAAEIIADFALNLDQGFPQT-PFGINLQVGDGGATGLLLDLPNEHILIGDRAAPYIED----PDNPTHI----------HVHVFVDHGIIEVIVNNRTAATIYDQP 525 L GT SRGLSMARTLGS +QV + GR+VLIGW + + QSLPR+L+++ LLQ FVPEL LR SP P G+ ++ L AE+ A + G+++ GDG + +P +++ + ED P P +H +DH IIEVIVNN TA +Y P Sbjct: 46 LSGTASRGLSMARTLGSEEADQVNLPGRKVLIGWTGPAPGSMPQIGNGASAQSLPRELSLAPDRSLLQRFVPELKSLRTSPLTTTP-GASSSPGLQAEVYATLPAECGEVVGAVGACGVSV-FGDGANATTISLMPYIGLVVINGTLQGNEDVRGGPLPPPCTLATCGVEGGWRIHAILDHSIIEVIVNNATAFVVYASP 243
BLAST of mRNA_M-pyrifera_M_contig75379.17792.1 vs. uniprot
Match: A0A7S2JF22_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2JF22_9EUKA) HSP 1 Score: 85.9 bits (211), Expect = 1.890e-18 Identity = 56/123 (45.53%), Postives = 74/123 (60.16%), Query Frame = 1 Query: 31 MARTLGSASPNQVTVSGRRVLIGWLSGATAVQSLPRDLTISKHGELLQAFVPELGVLRA----SPTPLPPSGSP------ANASLAAEIIADFALNLDQGFPQTPFGINLQVGDGGATGLLLD 369 MARTLGS PNQV VSGRRVL+GW+ G A QSL RDL++S ELLQAFVPEL LR + T + PS + + SL E++ F+ P +PFG+++ GG+T + +D Sbjct: 1 MARTLGS-DPNQVAVSGRRVLLGWIGGTPASQSLARDLSLSNQHELLQAFVPELKTLRQPSSFAVTRVAPSANDERSVVHCSGSLQLELVGHFSW-AGHDHPISPFGVSVL---GGSTSITID 118
BLAST of mRNA_M-pyrifera_M_contig75379.17792.1 vs. uniprot
Match: A0A0M0JVQ2_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JVQ2_9EUKA) HSP 1 Score: 90.5 bits (223), Expect = 5.880e-18 Identity = 72/202 (35.64%), Postives = 96/202 (47.52%), Query Frame = 1 Query: 1 LIGTQSRGLSMARTLGSASPNQVTVSGRRVLIGW----------LSGATAVQSLPRDLTISKHGELLQAFVPELGVLRASPTPLPPSGSPANASLAAEIIADFALNL-DQGFPQTPFGINLQVGDGGATGLLLDLPNEHILIGD---------RAAPYIEDPDNPT-------HIHVHVFVDHGIIEVIVNNRTAATIYDQP 525 L G SRG SMARTLGS +QVTV GRRVLIGW L+ + QS+ RDL ++ LLQ FVPEL R + +PA+A + AE+ A + D P GI++ GDG + LP+ ++ + RA P T +H +DH I+E+IVNN TA +Y P Sbjct: 340 LSGKASRGFSMARTLGSEQVDQVTVPGRRVLIGWTGPAPSDMPFLANLGSAQSISRDLALAPDRSLLQRFVPELTTARLTAV------APADAGMRAEVYATLPASCADAAGPTDACGISV-FGDGVNATTIKLLPSVGLVAVNATLQGNTLVRAGPLPPQCTAATCGEGAEDGWRIHAILDHSILELIVNNATAFVVYVAP 534
BLAST of mRNA_M-pyrifera_M_contig75379.17792.1 vs. uniprot
Match: A0A7S2GR64_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2GR64_9EUKA) HSP 1 Score: 77.4 bits (189), Expect = 4.960e-14 Identity = 57/128 (44.53%), Postives = 70/128 (54.69%), Query Frame = 1 Query: 1 LIGTQSRGLSMARTLGSASPNQVTVSGRRVLIGW----------LSGATAVQSLPRDLTISKHGELLQAFVPELGVLRASPTPLPPSGSPA-NASLAAEIIADFALNL-DQGFPQTPFGINLQVGDGG 348 L G SRGLSMARTLGS + +QVT GR+VLIGW L G + QSLPR+L++ LLQ FV EL LR + +GS +A L AE+ AD D T G++L GDGG Sbjct: 127 LSGMASRGLSMARTLGSENADQVTQPGRKVLIGWTGPAPKGMPQLGGRASAQSLPRELSLGPDRSLLQRFVLELETLRIQTSLRYITGSATYDAGLQAEVYADLPAECADATSAATACGVSLY-GDGG 253
BLAST of mRNA_M-pyrifera_M_contig75379.17792.1 vs. uniprot
Match: A0A7S2TW26_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TW26_9EUKA) HSP 1 Score: 71.2 bits (173), Expect = 1.180e-11 Identity = 69/201 (34.33%), Postives = 92/201 (45.77%), Query Frame = 1 Query: 10 TQSRGLSMARTLGSASPNQVTVSGRRVLIGWLS-GATAVQSLPRDLTISKHGELLQAFVPELGVLRASPTPLP---------PSGSPANASLA----AEIIADFALNLD-QGFPQTPFGINLQVGDGGA--TGLLLDLPNEHILIGDRAAPYIEDPDNPT------------HIHVHVFVDHGIIEVIVNNRTAATIYDQP 525 T R SMAR LGS N V SGR+V+ WL A+ SL RDL++ LLQAFVPEL LR + SG N ++ AEI +F ++ Q FGIN+ D T L +DL + +I + P I +HV+VD G+IE+IVNNRTA ++ +P Sbjct: 37 TVDRVYSMARALGSEQQNHVLGSGRKVMFAWLKENPNAILSLGRDLSLDDDLTLLQAFVPELQALRVQGSHALLSSDRQQQFSSGEDNNMAVRVGMHAEIYGEFTNLVEAQAKGLRGFGINVLACDEQREFTRLGIDLDHGLAIINGIRQKRRKPVGGPLVFGGRGELRKMDRIAMHVYVDGGMIEMIVNNRTAVSLPVKP 237
BLAST of mRNA_M-pyrifera_M_contig75379.17792.1 vs. uniprot
Match: UPI000A083307 (GH92 family glycosyl hydrolase n=1 Tax=Paenibacillus barengoltzii TaxID=343517 RepID=UPI000A083307) HSP 1 Score: 55.5 bits (132), Expect = 9.090e-6 Identity = 61/189 (32.28%), Postives = 85/189 (44.97%), Query Frame = 1 Query: 52 ASPNQVTVSGRRVLIGWL-----------SGATAVQSLPRDLTISKHGE---LLQAFVPELGVLRASPTPLPPS-GSPANASL-----AAEIIADFALNLDQGFPQTPFGINLQVGDGGA--TGLLLDLPNEHILIGDRA--------------APYIEDPDNPTHIHVHVFVDHGIIEVIVNNRTAAT 510 A + + GRR+L GWL G + VQS+PR T+ H + L+ V EL VLR +P LP + SP + L AAEIIA+F L + T FG + G T L D+ I++ DR+ APY + + VH+F+DH I+EV VN+ T Sbjct: 1015 APQSMLAPDGRRILWGWLPDNARGEMKEIQGWSGVQSIPR--TVELHPDTNTLIFKPVVELQVLRETPYELPKTVWSPGHHELGIQGKAAEIIAEFELIGSE----TSFGFEVFRSPDGEEQTTLKFDVSGGQIVL-DRSRSSQAAGVHSWELVAPY--EMQQHKQLRVHLFLDHSIVEVFVNDELCLT 1194 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig75379.17792.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig75379.17792.1 >prot_M-pyrifera_M_contig75379.17792.1 ID=prot_M-pyrifera_M_contig75379.17792.1|Name=mRNA_M-pyrifera_M_contig75379.17792.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=165bp MARTLGSASPNQVTVSGRRVLIGWLSGATAVQSLPRDLTISKHGELLQAFback to top mRNA from alignment at M-pyrifera_M_contig75379:166..690+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig75379.17792.1 ID=mRNA_M-pyrifera_M_contig75379.17792.1|Name=mRNA_M-pyrifera_M_contig75379.17792.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=525bp|location=Sequence derived from alignment at M-pyrifera_M_contig75379:166..690+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig75379:166..690+ >mRNA_M-pyrifera_M_contig75379.17792.1 ID=mRNA_M-pyrifera_M_contig75379.17792.1|Name=mRNA_M-pyrifera_M_contig75379.17792.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=990bp|location=Sequence derived from alignment at M-pyrifera_M_contig75379:166..690+ (Macrocystis pyrifera P11B4 male)back to top |