mRNA_M-pyrifera_M_contig75273.17770.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig75273.17770.1
Unique NamemRNA_M-pyrifera_M_contig75273.17770.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig75273.17770.1 vs. uniprot
Match: A0A4D4JCQ0_9PSEU (Putative glycosyltransferase n=1 Tax=Gandjariella thermophila TaxID=1931992 RepID=A0A4D4JCQ0_9PSEU)

HSP 1 Score: 161 bits (408), Expect = 1.000e-43
Identity = 97/227 (42.73%), Postives = 131/227 (57.71%), Query Frame = 1
Query:    1 VRRPSLRQVGPFHPELRYGEDVDLIWRLRSVGT-IRYVPTAVASHPPRSTIESFARQRLGYGSAAGPLGRRHGAAVAPLRSSRWTLVIVGLALSGHTVAALGLHGLATRLLVPKLGSLSDPVIEAARLTTTGNVWAARTVARSAVRSWWPIAVFGLALPPTRRVALRWLGWALADRMIAE-----RSVDPAMLGL-GLIDDVSYGSGVWLGALRSRSLVALCPATND 660
            VR  +LR+ G F   LR+GEDVDL+WRL + G  +RY P AV  H PR  +  F RQR  YG++A PLG+RHG AVAP+R + W+ +      +G  +A +G+  +   LL  +LG +  P  E+ R    G++ A R +A +A R+WWP+AV  LA   TRR   RWL  A   R + E       VDP    L  + DD++YG+GVW GALR R+L  L P   D
Sbjct:  226 VRVAALREHGGFDERLRFGEDVDLVWRLVAAGAQVRYEPAAVVGHAPRDGLGGFLRQRFDYGTSAAPLGQRHGRAVAPVRMAPWSALAWAAVAAGRPLAGVGVAAVTAALLPRRLGRVGVPARESVRFACLGHLGAGRLLAGAATRAWWPVAVPLLAA--TRRG--RWLLAAALGRHLVEWYRRRPPVDPVRWWLLRVADDLAYGAGVWWGALRRRTLAPLLPDLAD 448          
BLAST of mRNA_M-pyrifera_M_contig75273.17770.1 vs. uniprot
Match: UPI001F5A6E8E (mycofactocin biosynthesis glycosyltransferase MftF n=1 Tax=Saccharopolyspora sp. K220 TaxID=2926618 RepID=UPI001F5A6E8E)

HSP 1 Score: 161 bits (407), Expect = 1.220e-43
Identity = 100/223 (44.84%), Postives = 131/223 (58.74%), Query Frame = 1
Query:    1 VRRPSLRQVGPFHPELRYGEDVDLIWRLRSVG-TIRYVPTAVASHPPRSTIESFARQRLGYGSAAGPLGRRHGAAVAPLRSSRWTLVIVGLALSGHTVAALGLHGLATRLLVPKLGSLSDPVIEAARLTTTGNVWAARTVARSAVRSWWPIAVFGLALPPTRRVALRWLGWA-LADRMIAERSVDPAMLGLGLI-DDVSYGSGVWLGALRSRSLVALCPATND 660
            VR  +LR++  F  +LR+GEDVDLIWRL +    +RY PTA   H PR++  +  RQR  YGS+AGPL +RHGAAVAP+R+S W+ +   L L+G T   + + G A  LL  KLG +  P  E+ RL   GNV A RT A +  R+W PIA+  L L    R+ L  +    L D       +DP    L  I DDV+YG GV  GAL+SRS  AL P+ +D
Sbjct:  216 VRVAALRELDGFDEDLRFGEDVDLIWRLIAQRHLVRYEPTATVQHAPRASWSALLRQRFDYGSSAGPLAQRHGAAVAPVRASLWSALAWALVLTGRTGVGIAVVGGAAVLLSRKLGKIGVPTSESLRLAVQGNVGAGRTFADAIGRAWAPIAIPVLMLSRRGRIVLGLVALRHLLDWTRQRPPLDPIRWSLARIADDVAYGCGVLRGALKSRSPAALLPSLSD 438          
BLAST of mRNA_M-pyrifera_M_contig75273.17770.1 vs. uniprot
Match: A0A7X6AKU5_9BACT (Mycofactocin system glycosyltransferase (Fragment) n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7X6AKU5_9BACT)

HSP 1 Score: 160 bits (404), Expect = 5.380e-43
Identity = 94/218 (43.12%), Postives = 126/218 (57.80%), Query Frame = 1
Query:    1 VRRPSLRQVGPFHPELRYGEDVDLIWRL-RSVGTIRYVPTAVASHPPRSTIESFARQRLGYGSAAGPLGRRHGAAVAPLRSSRWTLVIVGLALSGHTVAALGLHGLATRLLVPKLGSLSDPVIEAARLTTTGNVWAARTVARSAVRSWWPIAVFGLALPPTRR--VALRWLGWALADRMIAERSVDPAM-LGLGLIDDVSYGSGVWLGALRSRSLVAL 642
             R  ++R VG F P LR+GEDVDLIWRL    GT+RY P    +H PR +   +ARQR  YG +A  LG RHGA VAP R SRW+    G    G  +  +G+   ++  LVPKL ++    +EA RL+ TG++ A   +AR+  R WWP+AV G  + P  R  VA   +  +L D     R   P   + L + DD++YG+GVW GA+R RS VAL
Sbjct:  262 ARTDAIRAVGGFDPGLRFGEDVDLIWRLIDGGGTVRYEPAVEVTHDPRGSWAGWARQRWQYGRSATALGLRHGARVAPARCSRWSAAAWGAVAFGRPLLGVGVAAGSSAALVPKLRAIPGSTVEAIRLSATGHLHAGLGLARATARVWWPLAVVGALVVPRLRAAVAAALVVPSLLDWRRGRRPTGPIRSVALRVADDLAYGAGVWDGAVRDRSAVAL 479          
BLAST of mRNA_M-pyrifera_M_contig75273.17770.1 vs. uniprot
Match: A0A431IBD8_9ACTN (Mycofactocin system glycosyltransferase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A431IBD8_9ACTN)

HSP 1 Score: 159 bits (402), Expect = 9.330e-43
Identity = 99/232 (42.67%), Postives = 137/232 (59.05%), Query Frame = 1
Query:    1 VRRPSLRQVGPFHPELRYGEDVDLIWRLRSVG-TIRYVPTAVASHPPRSTIESFARQRLGYGSAAGPLGRRHGAAVAPLRSSRWTL-----VIVGLALSGHTVAALGLHGLATRLLVPKLGSLSDPVIEAARLTTTGNVWAARTVARSAVRSWWPIAVFGLALPP-TRRVALRWLGWALADRMIAERSVDPAM--------LGLGLIDDVSYGSGVWLGALRSRSLVALCPA 651
            +R  + R VG F P+L  GEDVDLIWRL   G  IRY PTAV  HPPR  + ++ RQR+GYGS+AGPL  RH   VAP+R S W+      +++G  L+G  +A   + G++  LL  +L  +  P   A RL  +G+  A   +AR+AVR WWP+ +    +    RRV+   +    AD  ++ R  DPA+        +GLG++DD +YG+GVW+GALR RS  AL PA
Sbjct:  237 LRTDAHRAVGGFDPDLSVGEDVDLIWRLADAGHRIRYEPTAVLDHPPRRGLGAWMRQRVGYGSSAGPLDARHPWRVAPVRCSPWSAAGWAAIVLGPGLAGP-IAGAAILGISAALLPRRLADV--PTGAALRLAVSGHGAAGVQLARAAVRVWWPVLLAASTVSRRARRVSAVSVAVTAADAAVSLRREDPALGAGLLAAIVGLGVLDDAAYGAGVWIGALRVRSPRALLPA 465          
BLAST of mRNA_M-pyrifera_M_contig75273.17770.1 vs. uniprot
Match: A0A4R4V2R2_9PSEU (Mycofactocin system glycosyltransferase n=5 Tax=Saccharopolyspora TaxID=1835 RepID=A0A4R4V2R2_9PSEU)

HSP 1 Score: 158 bits (399), Expect = 1.610e-42
Identity = 95/223 (42.60%), Postives = 128/223 (57.40%), Query Frame = 1
Query:    1 VRRPSLRQVGPFHPELRYGEDVDLIWRLRSVGTIRYVPTAVASHPPRSTIESFARQRLGYGSAAGPLGRRHGAAVAPLRSSRWTLVIVGLALSGHTVAALGLHGLATRLLVPKLGSLSDPVIEAARLTTTGNVWAARTVARSAVRSWWPIAVFGLALPPTRRVALRWLGWALADRMIAERS-VDPAMLGLGLI-DDVSYGSGVWLGALRSRSLVALCPATNDQ 663
            +R  +L ++G F   +R+GEDVDL+WRL +    RY P A+  H PR +  +  RQR GYG +AGPLGRRHG  VAP+R S W+++   L   G    AL + G A  LL  KLG+L  P  E+ +L   GN+ AAR +  +  RSW P+A+  L L    RV L      +A R +AE+  +DP    L  + DD +YG GV  GALR RS +AL P   D+
Sbjct:  216 MRTETLAELGGFDETMRFGEDVDLVWRLTARHQARYEPAAIVEHAPRPSWPALLRQRYGYGCSAGPLGRRHGEHVAPVRISLWSVLTWLLIAFGRPQLALAVTGAAAVLLARKLGALGIPATESIKLAARGNLGAARLLGDALGRSWAPLAIPPLLLTKRGRVVLA----LVAARHLAEKGELDPIRHTLARVADDAAYGCGVLRGALRERSTIALRPVLTDR 434          
BLAST of mRNA_M-pyrifera_M_contig75273.17770.1 vs. uniprot
Match: A0A840QAL3_9PSEU (Mycofactocin system glycosyltransferase n=1 Tax=Saccharopolyspora phatthalungensis TaxID=664693 RepID=A0A840QAL3_9PSEU)

HSP 1 Score: 158 bits (399), Expect = 1.860e-42
Identity = 99/224 (44.20%), Postives = 131/224 (58.48%), Query Frame = 1
Query:    1 VRRPSLRQVGPFHPELRYGEDVDLIWRLRSVG-TIRYVPTAVASHPPRSTIESFARQRLGYGSAAGPLGRRHGAAVAPLRSSRWTLVIVGLALSGHTVAALGLHGLATRLLVPKLGSLSDPVIEAARLTTTGNVWAARTVARSAVRSWWPIAVFGLALPPTRRVALRWLGWA-LADRMIAERSVDPAMLGLG-LIDDVSYGSGVWLGALRSRSLVALCPATNDQ 663
            VR  +LR++  F  +LR+GEDVDLIWRL +    +RY P A+  H PR+   +  RQR  YGS+AGPL +RHG AVAP+R+S W++V   L L+G T A L + G A  LL  KLG +  P  EA RL   GNV A R  A +  R+W P+A+  L L    RV L  +    + D       +DPA   L  ++DD++YG GV  GAL+SRSL  L P   D+
Sbjct:  218 VRTSALRELDGFDEDLRFGEDVDLIWRLIAHRHLVRYEPAAIVEHAPRTRWTALVRQRFDYGSSAGPLAQRHGDAVAPVRASVWSVVAWILVLTGRTGAGLAVVGGAAALLTRKLGKIGIPPQEAVRLAVHGNVGAGRVFADAIGRAWAPVAIPLLLLSRRGRVVLGLVALRHVLDWARKRPPLDPARWSLARIVDDLAYGCGVARGALKSRSLGPLLPFLTDR 441          
BLAST of mRNA_M-pyrifera_M_contig75273.17770.1 vs. uniprot
Match: A0A1I6S1J7_9PSEU (Mycofactocin system glycosyltransferase n=1 Tax=Saccharopolyspora flava TaxID=95161 RepID=A0A1I6S1J7_9PSEU)

HSP 1 Score: 157 bits (396), Expect = 4.430e-42
Identity = 97/223 (43.50%), Postives = 129/223 (57.85%), Query Frame = 1
Query:    1 VRRPSLRQVGPFHPELRYGEDVDLIWRLRSVGTIRYVPTAVASHPPRSTIESFARQRLGYGSAAGPLGRRHGAAVAPLRSSRWTLVIVGLALSGHTVAALGLHGLATRLLVPKLGSLSDPVIEAARLTTTGNVWAARTVARSAVRSWWPIAVFGLALPPTRRVALRWLGWALADRMIAE-RSVDPAMLGLGLI-DDVSYGSGVWLGALRSRSLVALCPATNDQ 663
            VR  +L ++G F   LR+GEDVDLIWRL +    RY P A+  H PR +  +  RQR GYG +AGPLG RHG  VAP+R S W+ ++  L + G   +AL + G A  LL  KLG+   PV E+  L   GN+ AAR +A  A R+W P+A+  L L    R+ L ++    A R +AE R +DP    L  + +D +YG GV  GALR RS  AL P   D+
Sbjct:  216 VRTETLVELGGFDESLRFGEDVDLIWRLTARHQARYEPAAIVEHAPRPSWPALLRQRYGYGCSAGPLGSRHGENVAPVRLSLWSALVWLLVILGRHRSALVVTGAAAVLLTRKLGAFGIPVRESITLAVRGNLGAARLLADCAGRAWAPLAIPPLLLSKRGRLVLAFV----AARHLAEPRELDPLRHALARVAEDAAYGCGVLRGALRERSTTALRPVLTDR 434          
BLAST of mRNA_M-pyrifera_M_contig75273.17770.1 vs. uniprot
Match: A0A2T0LW13_9PSEU (Mycofactocin system glycosyltransferase n=1 Tax=Prauserella shujinwangii TaxID=1453103 RepID=A0A2T0LW13_9PSEU)

HSP 1 Score: 156 bits (394), Expect = 7.780e-42
Identity = 92/220 (41.82%), Postives = 122/220 (55.45%), Query Frame = 1
Query:    1 VRRPSLRQVGPFHPELRYGEDVDLIWRLRSVGTIRYVPTAVASHPPRSTIESFARQRLGYGSAAGPLGRRHGAAVAPLRSSRWTLVIVGLALSGHTVAALGLHGLATRLLVPKLGSLSDPVIEAARLTTTGNVWAARTVARSAVRSWWPIAVFGLALPPTRRVALRWLGWALADRMIAERSVDPAMLGLGLIDDVSYGSGVWLGALRSRSLVALCPATND 660
            VRR +L  V  F P LR+GEDVDL+WRL   G +RY P AV  H PR  +  + RQR  YG++A PL RRHG  ++  R S W+    GL  +G   AAL +  + T LL  KL     P  EA RL  +G++ A R +A +  R+WWP+A   L  P  RRV L  L   LA+ +       P    L + DD++YG+GVW G LR R+ V L P+  +
Sbjct:  223 VRRSALSAVDGFDPGLRFGEDVDLVWRLLESGYVRYQPAAVVRHDPRPRLRGWLRQRFDYGTSAAPLARRHGRDLSCARLSGWSAAAWGLLAAGRPGAALAVAAVTTALLPRKLRPSGVPGAEAVRLAASGHLGAGRLLADAVRRAWWPLA---LPSPRGRRVLLASLLPCLAESV----RHGPVWAALRIADDLAYGTGVWAGCLRHRTAVPLLPSFTE 435          
BLAST of mRNA_M-pyrifera_M_contig75273.17770.1 vs. uniprot
Match: A0A5M7BF16_SACHI (Mycofactocin system glycosyltransferase n=1 Tax=Saccharopolyspora hirsuta TaxID=1837 RepID=A0A5M7BF16_SACHI)

HSP 1 Score: 155 bits (392), Expect = 1.700e-41
Identity = 97/222 (43.69%), Postives = 121/222 (54.50%), Query Frame = 1
Query:    1 VRRPSLRQVGPFHPELRYGEDVDLIWRLRSVGTIRYVPTAVASHPPRSTIESFARQRLGYGSAAGPLGRRHGAAVAPLRSSRWTLVIVGLALSGHTVAALGLHGLATRLLVPKLGSLSDPVIEAARLTTTGNVWAARTVARSAVRSWWPIAVFGLALPPT-RRVALRWLGWALADRMIAERSVDPAMLGLG-LIDDVSYGSGVWLGALRSRSLVALCPATND 660
            VR   LR++G F  +LR+GEDVDLIWRL     +RY P A   H PR T  +  RQR  YG++AGPL  RHG AVAPLR+S W+ +   L  +  T  AL + G A  LL  KLG    P +E+ RLT  G + A R +A +  R W PIA   LA   T RR+    +   L D       +DPA   L  L DD +YG GV  GALR+R+   L P   D
Sbjct:  212 VRTEVLRELGGFDEDLRFGEDVDLIWRLARNHQVRYEPAATVHHQPRRTWPALLRQRFSYGTSAGPLATRHGTAVAPLRTSLWSALTWALISTRRTGPALAVTGAAAALLARKLGKTGVPAVESVRLTALGTLGAGRYLADAIGRPWAPIAAPLLAASRTGRRILTAVVLRHLLDWARERPPLDPARWTLARLADDAAYGCGVLRGALRARTSTPLLPVLTD 433          
BLAST of mRNA_M-pyrifera_M_contig75273.17770.1 vs. uniprot
Match: A0A365ZYB2_9PSEU (Mycofactocin system glycosyltransferase n=3 Tax=Prauserella TaxID=142577 RepID=A0A365ZYB2_9PSEU)

HSP 1 Score: 154 bits (390), Expect = 2.880e-41
Identity = 91/220 (41.36%), Postives = 122/220 (55.45%), Query Frame = 1
Query:    1 VRRPSLRQVGPFHPELRYGEDVDLIWRLRSVGTIRYVPTAVASHPPRSTIESFARQRLGYGSAAGPLGRRHGAAVAPLRSSRWTLVIVGLALSGHTVAALGLHGLATRLLVPKLGSLSDPVIEAARLTTTGNVWAARTVARSAVRSWWPIAVFGLALPPTRRVALRWLGWALADRMIAERSVDPAMLGLGLIDDVSYGSGVWLGALRSRSLVALCPATND 660
            VRR +L  V  F   LR+GEDVDL+WRL  +G +RY PTAV +H PR+ +  + RQR  YG++A PL RRH   ++P R S W+     L   G    AL L   +T LL  +L     PV E+ RL   G++ A R +A +  R+WWP A   L     RRV L  L    A+ +       PA L L + DD++YG+GVW G+LR R+  AL PA  +
Sbjct:  223 VRRSALSAVDGFDTGLRFGEDVDLVWRLLELGAVRYEPTAVVTHEPRAALRPWLRQRFEYGTSAAPLSRRHPGKLSPARLSAWSAAAWALLALGRPWLALALAAGSTALLPRRLRGRGVPVPESLRLAALGHLGAGRLLAEATRRAWWPAA---LLTARGRRVLLAALVPCAAEAL----GHSPAWLALRIADDLAYGAGVWTGSLRERTPAALLPAFTE 435          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig75273.17770.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4D4JCQ0_9PSEU1.000e-4342.73Putative glycosyltransferase n=1 Tax=Gandjariella ... [more]
UPI001F5A6E8E1.220e-4344.84mycofactocin biosynthesis glycosyltransferase MftF... [more]
A0A7X6AKU5_9BACT5.380e-4343.12Mycofactocin system glycosyltransferase (Fragment)... [more]
A0A431IBD8_9ACTN9.330e-4342.67Mycofactocin system glycosyltransferase n=1 Tax=Ac... [more]
A0A4R4V2R2_9PSEU1.610e-4242.60Mycofactocin system glycosyltransferase n=5 Tax=Sa... [more]
A0A840QAL3_9PSEU1.860e-4244.20Mycofactocin system glycosyltransferase n=1 Tax=Sa... [more]
A0A1I6S1J7_9PSEU4.430e-4243.50Mycofactocin system glycosyltransferase n=1 Tax=Sa... [more]
A0A2T0LW13_9PSEU7.780e-4241.82Mycofactocin system glycosyltransferase n=1 Tax=Pr... [more]
A0A5M7BF16_SACHI1.700e-4143.69Mycofactocin system glycosyltransferase n=1 Tax=Sa... [more]
A0A365ZYB2_9PSEU2.880e-4141.36Mycofactocin system glycosyltransferase n=3 Tax=Pr... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig75273contigM-pyrifera_M_contig75273:2..664 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score154.1
Seed ortholog evalue7.8e-35
Seed eggNOG ortholog43354.JOIJ01000004_gene3680
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Glycosyl transferase family group 2
EggNOG OGs2I4CF@201174,4EFEH@85010,COG1215@1,COG1215@2
COG Functional cat.M
Best tax levelPseudonocardiales
Best eggNOG OGNA|NA|NA
Exons1
Model size663
Cds size663
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816650.8179743-CDS-M-pyrifera_M_contig75273:1..6641622816650.8179743-CDS-M-pyrifera_M_contig75273:1..664Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig75273 2..664 +
1692278099.087855-CDS-M-pyrifera_M_contig75273:1..6641692278099.087855-CDS-M-pyrifera_M_contig75273:1..664Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig75273 2..664 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig75273.17770.1prot_M-pyrifera_M_contig75273.17770.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig75273 2..664 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig75273.17770.1

>prot_M-pyrifera_M_contig75273.17770.1 ID=prot_M-pyrifera_M_contig75273.17770.1|Name=mRNA_M-pyrifera_M_contig75273.17770.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=221bp
VRRPSLRQVGPFHPELRYGEDVDLIWRLRSVGTIRYVPTAVASHPPRSTI
ESFARQRLGYGSAAGPLGRRHGAAVAPLRSSRWTLVIVGLALSGHTVAAL
GLHGLATRLLVPKLGSLSDPVIEAARLTTTGNVWAARTVARSAVRSWWPI
AVFGLALPPTRRVALRWLGWALADRMIAERSVDPAMLGLGLIDDVSYGSG
VWLGALRSRSLVALCPATNDQ
back to top

mRNA from alignment at M-pyrifera_M_contig75273:2..664+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig75273.17770.1 ID=mRNA_M-pyrifera_M_contig75273.17770.1|Name=mRNA_M-pyrifera_M_contig75273.17770.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=663bp|location=Sequence derived from alignment at M-pyrifera_M_contig75273:2..664+ (Macrocystis pyrifera P11B4 male)
GTTCGCCGCCCTTCCCTGCGCCAGGTCGGCCCCTTCCATCCCGAGCTTCG CTACGGCGAAGACGTCGACCTGATCTGGCGCCTCCGATCCGTCGGCACGA TTCGCTATGTGCCGACGGCCGTCGCCTCTCACCCACCCCGTTCGACGATC GAGTCGTTTGCCCGGCAACGCCTCGGCTATGGCTCGGCCGCCGGCCCGCT CGGTCGACGACATGGCGCAGCGGTGGCACCACTGCGGAGCTCCCGCTGGA CCCTCGTCATCGTCGGGCTCGCATTGTCGGGCCACACCGTTGCCGCTCTC GGACTCCACGGGCTCGCCACACGGTTGCTGGTGCCCAAGCTGGGGTCGCT CAGCGACCCGGTCATCGAAGCTGCGAGACTCACCACCACGGGCAACGTGT GGGCGGCACGGACCGTGGCCCGCTCGGCCGTCCGATCCTGGTGGCCGATC GCCGTGTTCGGACTCGCGTTGCCACCGACGAGGCGCGTGGCGCTGCGATG GTTGGGCTGGGCGTTGGCCGACCGGATGATCGCCGAGCGCTCGGTCGACC CGGCCATGCTCGGCCTCGGTCTGATCGATGATGTCAGCTACGGATCGGGC GTGTGGCTCGGGGCACTGCGCTCACGATCTCTCGTGGCACTGTGCCCCGC CACCAACGATCAG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig75273:2..664+

>mRNA_M-pyrifera_M_contig75273.17770.1 ID=mRNA_M-pyrifera_M_contig75273.17770.1|Name=mRNA_M-pyrifera_M_contig75273.17770.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1326bp|location=Sequence derived from alignment at M-pyrifera_M_contig75273:2..664+ (Macrocystis pyrifera P11B4 male)
GTTCGCCGCCCTTCCCTGCGCCAGGTCGGCCCCTTCCATCCCGAGCTTCG
CTACGGCGAAGACGTCGACCTGATCTGGCGCCTCCGATCCGTCGGCACGA
TTCGCTATGTGCCGACGGCCGTCGCCTCTCACCCACCCCGTTCGACGATC
GAGTCGTTTGCCCGGCAACGCCTCGGCTATGGCTCGGCCGCCGGCCCGCT
CGGTCGACGACATGGCGCAGCGGTGGCACCACTGCGGAGCTCCCGCTGGA
CCCTCGTCATCGTCGGGCTCGCATTGTCGGGCCACACCGTTGCCGCTCTC
GGACTCCACGGGCTCGCCACACGGTTGCTGGTGCCCAAGCTGGGGTCGCT
CAGCGACCCGGTCATCGAAGCTGCGAGACTCACCACCACGGGCAACGTGT
GGGCGGCACGGACCGTGGCCCGCTCGGCCGTCCGATCCTGGTGGCCGATC
GCCGTGTTCGGACTCGCGTTGCCACCGACGAGGCGCGTGGCGCTGCGATG
GTTGGGCTGGGCGTTGGCCGACCGGATGATCGCCGAGCGCTCGGTCGACC
CGGCCATGCTCGGCCTCGGTCTGATCGATGATGTCAGCTACGGATCGGGC
GTGTGGCTCGGGGCACTGCGCTCACGATCTCTCGTGGCACTGTGCCCCGC
CACCAACGATCAGGTTCGCCGCCCTTCCCTGCGCCAGGTCGGCCCCTTCC
ATCCCGAGCTTCGCTACGGCGAAGACGTCGACCTGATCTGGCGCCTCCGA
TCCGTCGGCACGATTCGCTATGTGCCGACGGCCGTCGCCTCTCACCCACC
CCGTTCGACGATCGAGTCGTTTGCCCGGCAACGCCTCGGCTATGGCTCGG
CCGCCGGCCCGCTCGGTCGACGACATGGCGCAGCGGTGGCACCACTGCGG
AGCTCCCGCTGGACCCTCGTCATCGTCGGGCTCGCATTGTCGGGCCACAC
CGTTGCCGCTCTCGGACTCCACGGGCTCGCCACACGGTTGCTGGTGCCCA
AGCTGGGGTCGCTCAGCGACCCGGTCATCGAAGCTGCGAGACTCACCACC
ACGGGCAACGTGTGGGCGGCACGGACCGTGGCCCGCTCGGCCGTCCGATC
CTGGTGGCCGATCGCCGTGTTCGGACTCGCGTTGCCACCGACGAGGCGCG
TGGCGCTGCGATGGTTGGGCTGGGCGTTGGCCGACCGGATGATCGCCGAG
CGCTCGGTCGACCCGGCCATGCTCGGCCTCGGTCTGATCGATGATGTCAG
CTACGGATCGGGCGTGTGGCTCGGGGCACTGCGCTCACGATCTCTCGTGG
CACTGTGCCCCGCCACCAACGATCAG
back to top