mRNA_M-pyrifera_M_contig7516.17751.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig7516.17751.1 vs. uniprot
Match: A0A6H5J9S3_9PHAE (Herpes_Helicase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9S3_9PHAE) HSP 1 Score: 127 bits (320), Expect = 3.550e-35 Identity = 71/134 (52.99%), Postives = 87/134 (64.93%), Query Frame = 1 Query: 31 VLTRRLDASAGLTNGAKVIVLSIMPYTLYVSISKYGTTHWIPRITFGFITWQG-------FPVRFCFAVILHRSQGQTLGEVVLDLRRDVFMHGSLYVGLSRVRPLDYIRIVTTEDRICPCELCSRTVNVVYPS 411 +LTR LD S GL N K++VL I +TL K G H+IPRITFGFIT QG FPVR CFA+ +H+SQGQTL +V+ D R DVFMHG LYV LSRVR + IRI+ R+ + +R +NVVY S Sbjct: 1 MLTRNLDISNGLCNSTKLVVLHITNFTLRAKNLKDGVEHFIPRITFGFITRQGVAVKRVQFPVRLCFAITIHKSQGQTLDKVLFDNRTDVFMHGCLYVALSRVRAANDIRILVEPCRVS-ADGFARVLNVVYKS 133
BLAST of mRNA_M-pyrifera_M_contig7516.17751.1 vs. uniprot
Match: D7FZH9_ECTSI (ATP-dependent DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZH9_ECTSI) HSP 1 Score: 125 bits (314), Expect = 1.020e-30 Identity = 67/141 (47.52%), Postives = 89/141 (63.12%), Query Frame = 1 Query: 10 IKLGVCVVLTRRLDASAGLTNGAKVIVLSIMPYTLYVSISKYGTTHWIPRITFGFITWQG-------FPVRFCFAVILHRSQGQTLGEVVLDLRRDVFMHGSLYVGLSRVRPLDYIRIVTTEDRICPCELCSRTVNVVYPS 411 + +GV V+L R L LTNG KV+V++I P+TL + +G W+PRI F F+T QG FPVR CF + +HR+QGQTL + +DL R F HG LYVGLSRVR D I I+TT DRI ++ ++ NVV+ S Sbjct: 507 LNVGVVVMLCRNLSIDDCLTNGTKVVVVAIQPFTLKLQTLDHGKMFWLPRIAFNFVTDQGVAVKRVQFPVRLCFCLTVHRAQGQTLDKTCIDLTRHPFAHGHLYVGLSRVRKSDDIIILTTSDRI-DGDVFAKVHNVVFKS 646
BLAST of mRNA_M-pyrifera_M_contig7516.17751.1 vs. uniprot
Match: A0A6P8ZK23_THRPL (ATP-dependent DNA helicase n=1 Tax=Thrips palmi TaxID=161013 RepID=A0A6P8ZK23_THRPL) HSP 1 Score: 101 bits (252), Expect = 2.860e-22 Identity = 59/142 (41.55%), Postives = 82/142 (57.75%), Query Frame = 1 Query: 7 KIKLGVCVVLTRRLDASAGLTNGAKVIVLSIMPYTLYVSISKYGTTHWIPRITFGF---------ITWQGFPVRFCFAVILHRSQGQTLGEVVLDLRRDVFMHGSLYVGLSRVRPLDYIRIVTTEDRICPCELCSRTVNVVY 405 K+K+G +TR L+ GL NG KV+V ++ P + V + T IPRITF F I + FP++ +A+ H+SQGQT+ +V +DLR D F HG LYVGLSRVR D I ++ DRI + + T N+VY Sbjct: 810 KLKIGAVCFITRNLNIEEGLVNGTKVVVEAVSPRIVRVRKAGGNETFAIPRITFKFPIVDGAPLMINRRQFPLQLAYAMSFHKSQGQTINKVGVDLRTDCFTHGQLYVGLSRVRSPDDIVVLVPHDRIH--DGVAYTKNIVY 949
BLAST of mRNA_M-pyrifera_M_contig7516.17751.1 vs. uniprot
Match: A0A6J1TGF1_FRAOC (ATP-dependent DNA helicase n=1 Tax=Frankliniella occidentalis TaxID=133901 RepID=A0A6J1TGF1_FRAOC) HSP 1 Score: 99.4 bits (246), Expect = 1.920e-21 Identity = 56/141 (39.72%), Postives = 78/141 (55.32%), Query Frame = 1 Query: 10 IKLGVCVVLTRRLDASAGLTNGAKVIVLSIMPYTLYVSISKYGTTHWIPRITFGFITWQG---------FPVRFCFAVILHRSQGQTLGEVVLDLRRDVFMHGSLYVGLSRVRPLDYIRIVTTEDRICPCELCSRTVNVVY 405 +K+G ++TR L+ GL NG K +V SI P + V + ++ IPRI F F G FP++ +A+ H+SQGQT+ V LDLR D F HG LYVGLSRVR D I ++ DR+ + T N++Y Sbjct: 1720 LKIGAVCLITRNLNIEQGLVNGTKCVVESISPQLIRVRLPNSNRSYGIPRILFKFPIVDGSPMTMVRRQFPLQLAYAMTFHKSQGQTIKTVGLDLRTDCFTHGQLYVGLSRVRSPDDITVLVPPDRVH--NGIAYTKNIIY 1858
BLAST of mRNA_M-pyrifera_M_contig7516.17751.1 vs. uniprot
Match: UPI001EEAF528 (ATP-dependent DNA helicase PIF1-like n=1 Tax=Homalodisca vitripennis TaxID=197043 RepID=UPI001EEAF528) HSP 1 Score: 90.5 bits (223), Expect = 1.290e-19 Identity = 60/148 (40.54%), Postives = 81/148 (54.73%), Query Frame = 1 Query: 7 KIKLGVCVVLTRRLDASAGLTNGAKVIVLSIMPYTLYVSISKYGTTHWIPRITFGFITWQGFPVRFC---FAVIL------HRSQGQTLGEVVLDLRRDVFMHGSLYVGLSRVRPLDYIRIVTTEDRICPCELCSRTVNVVYPSSPLN 423 ++K+G ++ R L+ GL NG KVIV +I + V + IPRITF F +G P+R C F ++L H+SQGQT+ V +DLR D F HG LYV LSRVR D I ++ +DRI E + N+VY LN Sbjct: 80 RLKVGSVCLIMRNLNIGDGLVNGTKVIVTAISSRLITVRLIGNTQPIGIPRITFRFAFAEGSPLRVCRRQFPLMLAYCMTGHKSQGQTIEYVGVDLRTDCFTHGQLYVLLSRVRRPDDIVVLVPDDRIV--EGVAYAKNIVYDELLLN 225
BLAST of mRNA_M-pyrifera_M_contig7516.17751.1 vs. uniprot
Match: A0A6J1TE18_FRAOC (ATP-dependent DNA helicase n=1 Tax=Frankliniella occidentalis TaxID=133901 RepID=A0A6J1TE18_FRAOC) HSP 1 Score: 89.4 bits (220), Expect = 1.670e-19 Identity = 53/128 (41.41%), Postives = 72/128 (56.25%), Query Frame = 1 Query: 10 IKLGVCVVLTRRLDASAGLTNGAKVIVLSIMPYTLYVSISKYGTTHWI--PRITFGFITWQG---------FPVRFCFAVILHRSQGQTLGEVVLDLRRDVFMHGSLYVGLSRVRPLDYIRIVTTEDR 360 +K+G ++ R L+ S L NG KVIV I P V++ K GT I PRI F F +G FP++ C+ + +H+SQGQT+ +V LDLR D F HG LYV LSR R D + ++ DR Sbjct: 46 LKIGAVCMIMRNLNMSERLVNGTKVIVEGISPRL--VTVRKPGTQELIAIPRILFRFPVLEGSPLQMCRRQFPLQVCYGMTVHKSQGQTIFKVGLDLRSDCFTHGQLYVALSRTRRSDDVTVLGAPDR 171
BLAST of mRNA_M-pyrifera_M_contig7516.17751.1 vs. uniprot
Match: UPI001EEC96E2 (ATP-dependent DNA helicase PIF1-like n=2 Tax=Homalodisca vitripennis TaxID=197043 RepID=UPI001EEC96E2) HSP 1 Score: 87.8 bits (216), Expect = 1.870e-19 Identity = 59/137 (43.07%), Postives = 74/137 (54.01%), Query Frame = 1 Query: 40 RRLDASAGLTNGAKVIVLSIMPYTLYVSISKYGTTHWIPRITFGFITWQGFPVRFC---FAVIL------HRSQGQTLGEVVLDLRRDVFMHGSLYVGLSRVRPLDYIRIVTTEDRICPCELCSRTVNVVYPSSPLN 423 R L+ GL NG KVIV +I + V + IPRITF F +G P+R C F ++L H+SQGQT+ V +DLR D F HG LYV LSRVR D I ++ +DRI LC N+VY LN Sbjct: 2 RNLNIGDGLVNGTKVIVTAISSRLITVRLIGNTQPIGIPRITFRFAFAEGSPLRVCRRQFPLMLAYCMTGHKSQGQTIEYVGVDLRTDCFTHGQLYVLLSRVRRPDDIVVLVPDDRIVEGVLCIAK-NIVYDELLLN 137
BLAST of mRNA_M-pyrifera_M_contig7516.17751.1 vs. uniprot
Match: A0A6P8Y9Z8_THRPL (ATP-dependent DNA helicase n=1 Tax=Thrips palmi TaxID=161013 RepID=A0A6P8Y9Z8_THRPL) HSP 1 Score: 93.6 bits (231), Expect = 1.970e-19 Identity = 55/142 (38.73%), Postives = 79/142 (55.63%), Query Frame = 1 Query: 7 KIKLGVCVVLTRRLDASAGLTNGAKVIVLSIMPYTLYVSISKYGTTHWIPRITFGFITWQG---------FPVRFCFAVILHRSQGQTLGEVVLDLRRDVFMHGSLYVGLSRVRPLDYIRIVTTEDRICPCELCSRTVNVVY 405 ++K+G ++TR L+ GL NG KVIV SI P + V + + IPRITF F G FP++ + + +H+SQGQT+ V +DLR + F HG LYV LSRVR + I+++ R+ + T NVVY Sbjct: 1162 RLKVGAVCLITRNLNVDQGLVNGTKVIVQSISPNLVRVRKATSSESFGIPRITFKFPMLPGSPLTVVRRQFPLQLAYGMSVHKSQGQTIDLVGVDLRTECFTHGQLYVALSRVRSRENIKLLVPPARVLHGTV--HTKNVVY 1301
BLAST of mRNA_M-pyrifera_M_contig7516.17751.1 vs. uniprot
Match: UPI00103A3A51 (uncharacterized protein LOC114364057 n=1 Tax=Ostrinia furnacalis TaxID=93504 RepID=UPI00103A3A51) HSP 1 Score: 92.4 bits (228), Expect = 4.920e-19 Identity = 55/143 (38.46%), Postives = 77/143 (53.85%), Query Frame = 1 Query: 7 KIKLGVCVVLTRRLDASAGLTNGAKVIVLSIMPYTLYVSISKYGTTHWIPRITFGF---------ITWQGFPVRFCFAVILHRSQGQTLGEVVLDLRRDVFMHGSLYVGLSRVRPLDYIRIVTTEDRICPCELCSRTVNVVYP 408 K+K+G ++ R L S L NG KVIV+ P + V IPRI F +T + FP+ C+A+ +H+SQGQT+ V +DLR DVF HG LYV L RV+ I+I+ + D++ +L NVVYP Sbjct: 937 KLKVGCVCMIIRNLSFSDRLVNGTKVIVVKTTPRIIIVRKPGETNEFLIPRILFKAPIEPDSPIEMTRRQFPLALCYAMTVHKSQGQTINRVGVDLRSDVFSHGQLYVALGRVQEKSDIKILVSRDKLIDNKLLLN--NVVYP 1077
BLAST of mRNA_M-pyrifera_M_contig7516.17751.1 vs. uniprot
Match: UPI001EEC01C0 (ATP-dependent DNA helicase PIF1-like n=1 Tax=Homalodisca vitripennis TaxID=197043 RepID=UPI001EEC01C0) HSP 1 Score: 90.5 bits (223), Expect = 7.270e-19 Identity = 60/148 (40.54%), Postives = 81/148 (54.73%), Query Frame = 1 Query: 7 KIKLGVCVVLTRRLDASAGLTNGAKVIVLSIMPYTLYVSISKYGTTHWIPRITFGFITWQGFPVRFC---FAVIL------HRSQGQTLGEVVLDLRRDVFMHGSLYVGLSRVRPLDYIRIVTTEDRICPCELCSRTVNVVYPSSPLN 423 ++K+G ++ R L+ GL NG KVIV +I + V + IPRITF F +G P+R C F ++L H+SQGQT+ V +DLR D F HG LYV LSRVR D I ++ +DRI E + N+VY LN Sbjct: 192 RLKVGSVCLIMRNLNIGDGLVNGTKVIVTAISSRLITVRLIGNTQPIGIPRITFRFAFAEGSPLRVCRRQFPLMLAYCMTGHKSQGQTIEYVGVDLRTDCFTHGQLYVLLSRVRRPDDIVVLVPDDRIV--EGVAYAKNIVYDELLLN 337 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7516.17751.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7516.17751.1 >prot_M-pyrifera_M_contig7516.17751.1 ID=prot_M-pyrifera_M_contig7516.17751.1|Name=mRNA_M-pyrifera_M_contig7516.17751.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=143bp RQKIKLGVCVVLTRRLDASAGLTNGAKVIVLSIMPYTLYVSISKYGTTHWback to top mRNA from alignment at M-pyrifera_M_contig7516:1740..2189+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig7516.17751.1 ID=mRNA_M-pyrifera_M_contig7516.17751.1|Name=mRNA_M-pyrifera_M_contig7516.17751.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=450bp|location=Sequence derived from alignment at M-pyrifera_M_contig7516:1740..2189+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig7516:1740..2189+ >mRNA_M-pyrifera_M_contig7516.17751.1 ID=mRNA_M-pyrifera_M_contig7516.17751.1|Name=mRNA_M-pyrifera_M_contig7516.17751.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=858bp|location=Sequence derived from alignment at M-pyrifera_M_contig7516:1740..2189+ (Macrocystis pyrifera P11B4 male)back to top |