mRNA_M-pyrifera_M_contig75110.17745.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig75110.17745.1 vs. uniprot
Match: UPI001E68D7A0 (ATP-dependent DNA helicase PIF1-like n=1 Tax=Maniola jurtina TaxID=191418 RepID=UPI001E68D7A0) HSP 1 Score: 111 bits (277), Expect = 8.330e-26 Identity = 66/164 (40.24%), Postives = 97/164 (59.15%), Query Frame = 1 Query: 49 VEHLNSVQVPATPPRDLHVKIRALFVFIRNIDFDSGLINGKKGIIRGISLRVMHVEV--ISEEYPIVKIPRVCFQVQVGTRG-ITLRRFQFPVRLCYAMTISKAQGRTLKIVGLDVRGGVFFPGQLYVDFRRTTRRDNLLCLVKPERLIKGVPHVHNVVYSEFI 531 V+ LN +Q P DL +K+ + + IRN++F L+NG K I+ S R++ V +S++Y IPR+ F+ V I + R QFP+++CYAMTI K+QG+T+ VG+D+R VF GQLYV R R N+ L+ ER+I G P +NVVY + Sbjct: 227 VDALNRMQPKGIPEHDLTLKVGCVCMIIRNLNFSDKLVNGTKVIVVNTSPRLITVRKPGLSDDY---LIPRIIFKAPVEPGSPIEMCRRQFPLQVCYAMTIHKSQGQTICRVGVDLRSDVFSHGQLYVALSRAQHRQNIKILISEERVINGNPLANNVVYPPLL 387
BLAST of mRNA_M-pyrifera_M_contig75110.17745.1 vs. uniprot
Match: A0A6P5FUE2_ANACO (ATP-dependent DNA helicase n=1 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5FUE2_ANACO) HSP 1 Score: 111 bits (278), Expect = 3.510e-25 Identity = 69/162 (42.59%), Postives = 98/162 (60.49%), Query Frame = 1 Query: 49 VEHLNSVQVPATPPRDLHVKIRALFVFIRNIDFDSGLINGKKGIIRGISLRVMHVEVISEEYPIVK--IPRVCFQVQVGTRGITLRRFQFPVRLCYAMTISKAQGRTLKIVGLDVRGGVFFPGQLYVDFRRTTRRDNLLCLVKP-ERLIKGVPHVHNVVYSE 525 V+ LNS++ P +LH+KI A + +RNI+ +GL NG + II ++ RV+ ++ + + K IPR+ V TL+R QFP+RLCYAMTI+K+QG+TL+ VGL + VF GQLYV R T R L LV+ E +KG + N+VYSE Sbjct: 1089 VDFLNSLKFNGVPHHELHLKIGAPIMLLRNINQSAGLCNGTRLIITQLASRVIEAQIFTGNHAGEKVYIPRIIMHVTETKWPFTLKRRQFPIRLCYAMTINKSQGQTLEKVGLYLPRSVFSHGQLYVGVSRVTSRKGLRILVETKEESLKG--YTQNIVYSE 1248
BLAST of mRNA_M-pyrifera_M_contig75110.17745.1 vs. uniprot
Match: UPI001E688A66 (uncharacterized protein LOC123868181 n=2 Tax=Maniola jurtina TaxID=191418 RepID=UPI001E688A66) HSP 1 Score: 111 bits (277), Expect = 4.780e-25 Identity = 67/164 (40.85%), Postives = 97/164 (59.15%), Query Frame = 1 Query: 49 VEHLNSVQVPATPPRDLHVKIRALFVFIRNIDFDSGLINGKKGIIRGISLRVMHVEV--ISEEYPIVKIPRVCFQVQVGTRG-ITLRRFQFPVRLCYAMTISKAQGRTLKIVGLDVRGGVFFPGQLYVDFRRTTRRDNLLCLVKPERLIKGVPHVHNVVYSEFI 531 V+ LN +Q P DL +K+ + + IRN++F L+NG K I+ S R++ V +S++Y IPR+ F+ V I + R QFP+++CYAMTI K+QG+T+ VG+D+R VF GQLYV R R N+ LV ER+I G P +NVVY + Sbjct: 1083 VDALNRMQPKGIPEHDLTLKVGCVCMVIRNLNFSDKLVNGTKVIVVNTSPRLITVRKPGLSDDY---LIPRIIFKAPVEPGSPIEMCRRQFPLQVCYAMTIHKSQGQTICRVGVDLRSDVFSHGQLYVALSRAQHRQNIKILVNEERVINGNPLANNVVYPPLL 1243
BLAST of mRNA_M-pyrifera_M_contig75110.17745.1 vs. uniprot
Match: A0A6J1TE18_FRAOC (ATP-dependent DNA helicase n=1 Tax=Frankliniella occidentalis TaxID=133901 RepID=A0A6J1TE18_FRAOC) HSP 1 Score: 104 bits (259), Expect = 8.660e-25 Identity = 60/163 (36.81%), Postives = 96/163 (58.90%), Query Frame = 1 Query: 49 VEHLNSVQVPATPPRDLHVKIRALFVFIRNIDFDSGLINGKKGIIRGISLRVMHVEVISEEYPIVKIPRVCFQVQVGTRGITLR--RFQFPVRLCYAMTISKAQGRTLKIVGLDVRGGVFFPGQLYVDFRRTTRRDNLLCLVKPERLIKGVPHVHNVVYSEFI 531 ++ L+ + P L +KI A+ + +RN++ L+NG K I+ GIS R++ V + ++ IPR+ F+ V G L+ R QFP+++CY MT+ K+QG+T+ VGLD+R F GQLYV RT R D++ L P+R + + +V N+VY E + Sbjct: 28 IDTLHLAEGKGVPNHILDLKIGAVCMIMRNLNMSERLVNGTKVIVEGISPRLVTVRKPGTQ-ELIAIPRILFRFPV-LEGSPLQMCRRQFPLQVCYGMTVHKSQGQTIFKVGLDLRSDCFTHGQLYVALSRTRRSDDVTVLGAPDRCVDNITYVRNIVYQELL 188
BLAST of mRNA_M-pyrifera_M_contig75110.17745.1 vs. uniprot
Match: UPI001568188F (uncharacterized protein LOC117996074 n=2 Tax=Aphantopus hyperantus TaxID=2795564 RepID=UPI001568188F) HSP 1 Score: 110 bits (275), Expect = 9.150e-25 Identity = 65/164 (39.63%), Postives = 97/164 (59.15%), Query Frame = 1 Query: 49 VEHLNSVQVPATPPRDLHVKIRALFVFIRNIDFDSGLINGKKGIIRGISLRVMHVEV--ISEEYPIVKIPRVCFQVQVGTRG-ITLRRFQFPVRLCYAMTISKAQGRTLKIVGLDVRGGVFFPGQLYVDFRRTTRRDNLLCLVKPERLIKGVPHVHNVVYSEFI 531 V+ LN + P DL +K+ + + +RN++F L+NG K I+ S R++ V +S++Y IPR+ F+ + T I + R QFP+++CYAMTI K+QG+T+ VG+D+R VF GQLYV R R N+ LV ER+I G P +NVVY + Sbjct: 1642 VDALNRMHPKGIPEHDLTLKVGCVCMIMRNLNFSDKLVNGTKVIVVNTSPRLITVRKPGLSDDY---LIPRIIFKAPIETGSPIEMCRRQFPLQVCYAMTIHKSQGQTICRVGVDLRSDVFSHGQLYVALSRVQHRQNIKILVNKERVINGNPLANNVVYPPLL 1802
BLAST of mRNA_M-pyrifera_M_contig75110.17745.1 vs. uniprot
Match: A0A317YKU2_MAIZE (ATP-dependent DNA helicase (Fragment) n=1 Tax=Zea mays TaxID=4577 RepID=A0A317YKU2_MAIZE) HSP 1 Score: 108 bits (269), Expect = 5.010e-24 Identity = 72/187 (38.50%), Postives = 103/187 (55.08%), Query Frame = 1 Query: 4 DKIIAGYENIPDVGSV---EHLNSVQVPATPPRDLHVKIRALFVFIRNIDFDSGLINGKKGIIRGISLRVMHVEVIS-----EEYPIVKIPRVCFQVQVGTRGITLRRFQFPVRLCYAMTISKAQGRTLKIVGLDVRGGVFFPGQLYVDFRRTTRRDNLLCLVKPERLIKGVPHVHNVVYSEFIVAA 540 D I ENIPD + E LNS+ P L +K A+ + +RN++ + GL NG + ++ + R++H ++ EE V IPR+ TL+R QFPVRLCYAMTI+K+QG+TL VG+ ++ VF GQLYV R+T R+ L+ L++ E G NVVY E + AA Sbjct: 475 DVIAKSSENIPDFDVLYPTEFLNSIDANNFPTHKLELKKGAIVMLLRNLNQNKGLCNGTRLLVTQLGQRILHCVALTGSNVGEE---VLIPRIALNTTDVKWPFTLQRRQFPVRLCYAMTINKSQGQTLSRVGIYLKRPVFTHGQLYVAVSRSTSRNGLIILIENEDGSCG-SQTRNVVYKEVLAAA 657
BLAST of mRNA_M-pyrifera_M_contig75110.17745.1 vs. uniprot
Match: A0A3L6EV34_MAIZE (ATP-dependent DNA helicase n=1 Tax=Zea mays TaxID=4577 RepID=A0A3L6EV34_MAIZE) HSP 1 Score: 105 bits (263), Expect = 2.160e-23 Identity = 70/186 (37.63%), Postives = 102/186 (54.84%), Query Frame = 1 Query: 4 DKIIAGYENIPDVGSV---EHLNSVQVPATPPRDLHVKIRALFVFIRNIDFDSGLINGKKGIIRGISLRVMHVEVIS-----EEYPIVKIPRVCFQVQVGTRGITLRRFQFPVRLCYAMTISKAQGRTLKIVGLDVRGGVFFPGQLYVDFRRTTRRDNLLCLVKPERLIKGVPHVHNVVYSEFIVA 537 D I E+IPD + E LNS+ P L +K A+ + +RN++ + GL NG + ++ + R++H ++ EE V IPR+ TL+R QFPVRLCYAMTI+K+ G+TL VG+ ++G VF GQLYV R+T R+ L+ L++ E G NVVY E + A Sbjct: 314 DVIAKSSEHIPDFDVLYPTEFLNSIDANNFPTHKLELKKGAIVMLLRNLNQNKGLYNGTRLLVTQLGQRILHCVALTGSNVGEE---VLIPRIALNTTDVKWPFTLQRRQFPVRLCYAMTINKSHGQTLSRVGIYLKGPVFTHGQLYVAVSRSTSRNGLIILIENEDGSCG-SQTRNVVYKEVLAA 495
BLAST of mRNA_M-pyrifera_M_contig75110.17745.1 vs. uniprot
Match: A0A6P5EEX1_ANACO (ATP-dependent DNA helicase n=1 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5EEX1_ANACO) HSP 1 Score: 105 bits (262), Expect = 4.710e-23 Identity = 65/162 (40.12%), Postives = 98/162 (60.49%), Query Frame = 1 Query: 49 VEHLNSVQVPATPPRDLHVKIRALFVFIRNIDFDSGLINGKKGIIRGISLRVMHVEVISEEY--PIVKIPRVCFQVQVGTRGITLRRFQFPVRLCYAMTISKAQGRTLKIVGLDVRGGVFFPGQLYVDFRRTTRRDNLLCLVKP-ERLIKGVPHVHNVVYSE 525 V+ LNS++ P +L +KI A + +RNI+ +GL NG + +I ++ RV+ ++ + + V IPR+ V TL+R QFPVRLCYAMTI+K+Q +TL+ VGL + VF GQLYV R T RD + L++ E+ ++G + N+VYSE Sbjct: 732 VDFLNSLKFNGVPNHELKLKIGAPIMLLRNINQSAGLCNGTRLVITQLASRVIEAQIFTGNHVGEKVYIPRIVMNVTETKWPFTLKRRQFPVRLCYAMTINKSQEQTLQKVGLYLPRPVFSHGQLYVGVSRVTSRDGIRILIEDKEKTLEG--YTQNIVYSE 891
BLAST of mRNA_M-pyrifera_M_contig75110.17745.1 vs. uniprot
Match: A0A397ZA99_BRACM (ATP-dependent DNA helicase (Fragment) n=1 Tax=Brassica campestris TaxID=3711 RepID=A0A397ZA99_BRACM) HSP 1 Score: 102 bits (254), Expect = 9.420e-23 Identity = 62/161 (38.51%), Postives = 92/161 (57.14%), Query Frame = 1 Query: 49 VEHLNSVQVPATPPRDLHVKIRALFVFIRNIDFDSGLINGKKGIIRGISLRVMHVEVISEEY--PIVKIPRVCFQVQVGTRGITLRRFQFPVRLCYAMTISKAQGRTLKIVGLDVRGGVFFPGQLYVDFRRTTRRDNLLCLVKPERLIKGVPHVHNVVYSE 525 VE+LNS+ P P L +K+ A F+ +RN++ GL NG + I+ + RV+ E+++ + V +PR+ V TL R QFP+RLCYAMTI+K+QG++LK V L + VF GQLYV R T + L + +R + + V N+VY E Sbjct: 148 VEYLNSLSFPGLPAHKLTLKVGAPFMLLRNLNQKKGLCNGTRLIVTYLGERVIRGEIVTGSHIGHKVDLPRIILSESVTKHPFTLERRQFPIRLCYAMTINKSQGQSLKGVVLYLPQPVFTHGQLYVGLSRVTTKSGLKII---QRKDQKIGRVKNIVYKE 305
BLAST of mRNA_M-pyrifera_M_contig75110.17745.1 vs. uniprot
Match: A0A1Q5UDF3_9EURO (ATP-dependent DNA helicase n=1 Tax=Penicillium subrubescens TaxID=1316194 RepID=A0A1Q5UDF3_9EURO) HSP 1 Score: 104 bits (259), Expect = 1.190e-22 Identity = 63/163 (38.65%), Postives = 96/163 (58.90%), Query Frame = 1 Query: 49 VEHLNSVQVPATPPRDLHVKIRALFVFIRNIDFDSGLINGKKGIIRGISLRVMHVEVISEEYPIVK--IPRVCFQVQVGTRGITLRRFQFPVRLCYAMTISKAQGRTLKIVGLDVRGGVFFPGQLYVDFRRTTRRDNLLCLVKPERLIKGVPHVHNVVYSEFI 531 +E+L+S+ +P PP L +K+ A + IRN+ + GL NG + II G+ + +I+ ++ V+ IPR+ + G TLRR QFP+RLC+AMTI+K+QG++LK VG+D+R F GQLYV R T L L + +G+ NVV+ E + Sbjct: 723 LEYLHSINMPGLPPSMLALKVGAPIMLIRNLRQEDGLCNGTRLIITGLYRWNITARIIAGDHKRVEHTIPRIPLETTEGQLSFTLRRVQFPIRLCFAMTINKSQGQSLKQVGVDLRVPAFSHGQLYVALSRVTDVAKLSVLHE-----EGLDTTENVVFPEVL 880 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig75110.17745.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig75110.17745.1 >prot_M-pyrifera_M_contig75110.17745.1 ID=prot_M-pyrifera_M_contig75110.17745.1|Name=mRNA_M-pyrifera_M_contig75110.17745.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=181bp ADKIIAGYENIPDVGSVEHLNSVQVPATPPRDLHVKIRALFVFIRNIDFDback to top mRNA from alignment at M-pyrifera_M_contig75110:468..1010+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig75110.17745.1 ID=mRNA_M-pyrifera_M_contig75110.17745.1|Name=mRNA_M-pyrifera_M_contig75110.17745.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=543bp|location=Sequence derived from alignment at M-pyrifera_M_contig75110:468..1010+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig75110:468..1010+ >mRNA_M-pyrifera_M_contig75110.17745.1 ID=mRNA_M-pyrifera_M_contig75110.17745.1|Name=mRNA_M-pyrifera_M_contig75110.17745.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1086bp|location=Sequence derived from alignment at M-pyrifera_M_contig75110:468..1010+ (Macrocystis pyrifera P11B4 male)back to top |