mRNA_M-pyrifera_M_contig7511.17744.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig7511.17744.1 vs. uniprot
Match: D8LQL2_ECTSI (Similar to putative transmembrane protein 17 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQL2_ECTSI) HSP 1 Score: 301 bits (772), Expect = 4.720e-102 Identity = 159/203 (78.33%), Postives = 173/203 (85.22%), Query Frame = 1 Query: 1 MFRRRGG--YRRVH-ATVEAV--DAGVGSQENLAPDRSRYASEISSSLSLQILIYYNGLLSAVYFALEGGLVIEKLQHYRFESSLQRTVLAPIFIVWAIAEVHRFYLGYKGNIKEMVPHMCAFLLTTLFPQVFCLAFLAFFQEHRFPADPIIGSIHIAFLALELIVGYNGIKAIINKRTAQFFRVAQEEFFLRAESESHQRLL 594 MFRRRGG Y+R+ A ++ D GV +EN + DRSRYASEISSSLSLQILIYYNGLLS +YF L GGLVIEKL +YRFES LQRTVLAPIFI WAIAEVHRFY GYKGNIKEMVPHMCAFLL T+FPQ+FCLAFLAFFQEH+FP DPI+G+IHIAFLA E IVGYNGIKAIINKRTAQFFRVAQEE+ LR SE H RLL Sbjct: 1 MFRRRGGAGYQRLRVAATDSTHHDVGVTYRENPSADRSRYASEISSSLSLQILIYYNGLLSLIYFVLGGGLVIEKLYNYRFESELQRTVLAPIFISWAIAEVHRFYFGYKGNIKEMVPHMCAFLLMTVFPQMFCLAFLAFFQEHQFPVDPILGAIHIAFLASETIVGYNGIKAIINKRTAQFFRVAQEEYLLRPASEEHARLL 203
BLAST of mRNA_M-pyrifera_M_contig7511.17744.1 vs. uniprot
Match: A0A8J2SKP3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SKP3_9STRA) HSP 1 Score: 137 bits (344), Expect = 1.860e-37 Identity = 71/147 (48.30%), Postives = 97/147 (65.99%), Query Frame = 1 Query: 112 EISSSLSLQILIYYNGLLSAVYFALEGGLVIEKLQHYRFESSLQRTVLAPIFIVWAIAEVHRFYLGYKGNIKEMVPHMCAFLLTTLFPQVFCLAFLAFFQEHRFPADPIIGSIHIAFLALELIVGYNGIKAIINKRTAQFFRVAQEE 552 EI SSL LQ +I+Y G+ S +YFA+ GG ++ KLQ+Y+F++S+ + PIF +W E+ R LGY GN+ E VP + AFLL T+FPQ+ + FL F Q+ FP D GS+ I FL EL VG K +I ++TAQFFR+ QEE Sbjct: 11 EIKSSLGLQQVIFYQGMFSLLYFAICGGCLLNKLQNYKFQNSILFILTLPIFSLWCCIEIVRIGLGYIGNLLEKVPMISAFLLLTIFPQLVAILFLTFLQDPVFPFDTAAGSMMILFLLSELYVGRLTFKTLIERQTAQFFRLCQEE 157
BLAST of mRNA_M-pyrifera_M_contig7511.17744.1 vs. uniprot
Match: A0A7S2V551_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V551_9STRA) HSP 1 Score: 135 bits (340), Expect = 1.400e-36 Identity = 65/146 (44.52%), Postives = 97/146 (66.44%), Query Frame = 1 Query: 115 ISSSLSLQILIYYNGLLSAVYFALEGGLVIEKLQHYRFESSLQRTVLAPIFIVWAIAEVHRFYLGYKGNIKEMVPHMCAFLLTTLFPQVFCLAFLAFFQEHRFPADPIIGSIHIAFLALELIVGYNGIKAIINKRTAQFFRVAQEE 552 ++SS+SL IL+Y + ++S VYF L G L++ KL + F S L + +L P FI+ I + RFY G++GN+KE VP + AFL+ T FP F +A++ F QE +P D +IG + I + LE GY +K +IN++TA+FFR+ QEE Sbjct: 34 VASSVSLHILLYLDSMVSIVYFFLGGSLILHKLSSFDFVSPLHQLLLIPCFIILLICDTSRFYFGFQGNLKERVPQVIAFLMITFFPTFFVMAYMTFVQEVLYPFDVVIGWMFIMLMLLEFYFGYRCVKRLINRQTARFFRLCQEE 179
BLAST of mRNA_M-pyrifera_M_contig7511.17744.1 vs. uniprot
Match: F0YGR8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGR8_AURAN) HSP 1 Score: 118 bits (295), Expect = 1.810e-30 Identity = 58/127 (45.67%), Postives = 84/127 (66.14%), Query Frame = 1 Query: 172 VYFALEGGLVIEKLQHYRFESSLQRTVLAPIFIVWAIAEVHRFYLGYKGNIKEMVPHMCAFLLTTLFPQVFCLAFLAFFQEHRFPADPIIGSIHIAFLALELIVGYNGIKAIINKRTAQFFRVAQEE 552 +YF + GG ++ K+ +Y F++ + + + PIF++W+ E+ R LGY GNIKE VP + AFLL T+FPQV + F A Q+ FP D GSI I +L +EL VG +K +I ++TAQFFR+ QEE Sbjct: 2 LYFVVCGGCLLNKIYNYEFQNGILKILTLPIFLLWSCTELARVALGYIGNIKERVPMISAFLLLTMFPQVVAVFFFAILQDPVFPFDRAAGSIMIFYLVIELFVGRFTLKTLIQRQTAQFFRLCQEE 128
BLAST of mRNA_M-pyrifera_M_contig7511.17744.1 vs. uniprot
Match: A0A0H5RTX2_9EUKA (Uncharacterized protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5RTX2_9EUKA) HSP 1 Score: 94.4 bits (233), Expect = 1.100e-20 Identity = 52/141 (36.88%), Postives = 81/141 (57.45%), Query Frame = 1 Query: 112 EISSSLSLQILIYYNGLLSAVYFALEGGLVIEKLQHYRFESSLQRTVLAPIFI-VWAIAEVHRFYLGYKGNIKEMVPHMCAFLLTTLFPQVFCLAFLAFFQEHRFPADPIIGSIHIAFLALELIVGYNGIKAIINKRTAQF 531 ++SSSLSLQIL+YYN S +Y + + K+ Y+ + + +VL PI + +W + E R L Y GN++E + H+ AF TLFPQ F + ++ Q+H + SI I FL ELI+GY+ I+ I+ + +F Sbjct: 34 QMSSSLSLQILLYYNVWYSGLYAVVNILITSFKISKYKDDQFV--SVLTPILLGIWCLVEPCRLALAYAGNLQERIQHLAAFFFLTLFPQAFLVVYVLAIQKHVLTGETTSASIQIGFLVAELIIGYHTIQYIVKIQATRF 172
BLAST of mRNA_M-pyrifera_M_contig7511.17744.1 vs. uniprot
Match: G4ZTW0_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZTW0_PHYSP) HSP 1 Score: 72.8 bits (177), Expect = 1.400e-12 Identity = 41/140 (29.29%), Postives = 72/140 (51.43%), Query Frame = 1 Query: 127 LSLQILIYYNGLLSAVYFALEGGLVIEKLQHYRFESSLQRTVLAPIFIVWAIAEVHRFYLGYKGNIKEMVPHMCAFLLTTLFPQVFCLAFLAFFQEHRFPADPIIGSIHIAFLALELIVGYNGIKAIINKRTAQFFRVAQ 546 L LQ I + +++ + L+ +KL + SSLQR + +V A+V R+YLG +GN++ V + AF+ + P +L FF EHR P D + G+ + L E I GY ++ ++ + A+F ++ + Sbjct: 12 LILQQTICFEAWFGFLFYPISCLLLRDKLAALEYNSSLQRALPVCCLVVLIPADVARYYLGTRGNLRAQVFPLTAFMFLSACPVFPGFVYLTFFAEHRLPFDVVAGTCFVLLLIAECITGYVVLRELLRQEAARFLKMRE 151
BLAST of mRNA_M-pyrifera_M_contig7511.17744.1 vs. uniprot
Match: A0A6A3KTU6_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3KTU6_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 2.520e-12 Identity = 41/140 (29.29%), Postives = 74/140 (52.86%), Query Frame = 1 Query: 127 LSLQILIYYNGLLSAVYFALEGGLVIEKLQHYRFESSLQRTVLAPIFIVWAIAEVHRFYLGYKGNIKEMVPHMCAFLLTTLFPQVFCLAFLAFFQEHRFPADPIIGSIHIAFLALELIVGYNGIKAIINKRTAQFFRVAQ 546 L LQ I + +++ + L+ +KL + SSLQR +L +V A+V R+YLG +GN++ V + AF+ + P L +L+FF EHR P D + G+ + L E G+ ++ ++ + A+F ++ + Sbjct: 12 LMLQQTICFEAWFGFLFYPISCLLLRDKLAALEYNSSLQRALLVCCLVVLIPADVARYYLGTRGNLRAQVFPLTAFMFLSACPLFPGLVYLSFFAEHRLPFDIVAGTGFVLLLVAECGAGFVVLRELLRQEAARFLKMRE 151
BLAST of mRNA_M-pyrifera_M_contig7511.17744.1 vs. uniprot
Match: A0A8C3T3N4_CHESE (Uncharacterized protein n=1 Tax=Chelydra serpentina TaxID=8475 RepID=A0A8C3T3N4_CHESE) HSP 1 Score: 70.9 bits (172), Expect = 1.030e-11 Identity = 52/166 (31.33%), Postives = 82/166 (49.40%), Query Frame = 1 Query: 82 LAPDRSRYASEISSSLSLQILIYYNGLLSAVYFALEGGLVIEKLQHYRFESSLQRTVLAPIFIVWAIAEVHRFYLGYKGNIKEMVPHMCAFLLTTLFPQVFCLAFLAFFQEH--RFPADPIIGSIHIAFLALELIVGYNGIKAIINKRTAQFFRVAQEE---FFLR 564 L P S E+ SSL LQ+++++N + EG ++ K Y + +L F++ A+AE R YLGY GN++E VP + FLL + Q+ L FL EH R P + + I++ FLA E+ + +K + + QF+ E+ FF R Sbjct: 26 LVPFHSCLGHEVLSSLPLQMMLFFNVFYFPFWCLSEGIMLALK---YGLLPCYYQVLLVAAFLILALAEGLRLYLGYIGNLQEKVPELAGFLLLSFLIQLPLLLFLLT-DEHIIRLPLETAVHIIYLVFLASEITAAFFALKVMTRQLATQFYLKQFEDAGRFFAR 187
BLAST of mRNA_M-pyrifera_M_contig7511.17744.1 vs. uniprot
Match: UPI001CAA1017 (transmembrane protein 17B-like n=2 Tax=Chelonioidea TaxID=27791 RepID=UPI001CAA1017) HSP 1 Score: 70.9 bits (172), Expect = 1.410e-11 Identity = 45/143 (31.47%), Postives = 76/143 (53.15%), Query Frame = 1 Query: 112 EISSSLSLQILIYYNGLLSAVYFALEGGLVIEKLQHYRFESSLQRTVLAPIFIVWAIAEVHRFYLGYKGNIKEMVPHMCAFLLTTLFPQVFCLAFLAFFQEH--RFPADPIIGSIHIAFLALELIVGYNGIKAIINKRTAQFF 534 E+ SSL LQ+++++N + EG ++ K Y + +L +F++ A+A+ R YLGY GN++E VP + FLL + Q+ L FL EH R P + + I++ FLA E+ + G+K + + QF+ Sbjct: 38 EVLSSLPLQMMLFFNVFYFPFWCLSEGIMLALK---YSLLPCYYQFLLVAVFLILALADGLRLYLGYIGNLQEKVPELAGFLLLSFLIQLPLLLFLLT-DEHIIRLPLETAVHIIYLVFLASEITAAFFGLKVMTRQLATQFY 176
BLAST of mRNA_M-pyrifera_M_contig7511.17744.1 vs. uniprot
Match: A0A8C3T123_CHESE (Uncharacterized protein n=1 Tax=Chelydra serpentina TaxID=8475 RepID=A0A8C3T123_CHESE) HSP 1 Score: 70.5 bits (171), Expect = 2.120e-11 Identity = 48/153 (31.37%), Postives = 77/153 (50.33%), Query Frame = 1 Query: 82 LAPDRSRYASEISSSLSLQILIYYNGLLSAVYFALEGGLVIEKLQHYRFESSLQRTVLAPIFIVWAIAEVHRFYLGYKGNIKEMVPHMCAFLLTTLFPQVFCLAFLAFFQEH--RFPADPIIGSIHIAFLALELIVGYNGIKAIINKRTAQFF 534 L P S E+ SSL LQ+++++N + EG ++ K Y + +L F++ A+AE R YLGY GN++E VP + FLL + Q+ L FL EH R P + + I++ FLA E+ + +K + + QF+ Sbjct: 39 LVPFHSCLGHEVLSSLPLQMMLFFNVFYFPFWCLSEGIMLALK---YGLLPCYYQVLLVAAFLILALAEGLRLYLGYIGNLQEKVPELAGFLLLSFLIQLPLLLFLLT-DEHIIRLPLETAVHIIYLVFLASEITAAFFALKVMTRQLATQFY 187 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7511.17744.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7511.17744.1 >prot_M-pyrifera_M_contig7511.17744.1 ID=prot_M-pyrifera_M_contig7511.17744.1|Name=mRNA_M-pyrifera_M_contig7511.17744.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=199bp MFRRRGGYRRVHATVEAVDAGVGSQENLAPDRSRYASEISSSLSLQILIYback to top mRNA from alignment at M-pyrifera_M_contig7511:3723..7284+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig7511.17744.1 ID=mRNA_M-pyrifera_M_contig7511.17744.1|Name=mRNA_M-pyrifera_M_contig7511.17744.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3562bp|location=Sequence derived from alignment at M-pyrifera_M_contig7511:3723..7284+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig7511:3723..7284+ >mRNA_M-pyrifera_M_contig7511.17744.1 ID=mRNA_M-pyrifera_M_contig7511.17744.1|Name=mRNA_M-pyrifera_M_contig7511.17744.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1194bp|location=Sequence derived from alignment at M-pyrifera_M_contig7511:3723..7284+ (Macrocystis pyrifera P11B4 male)back to top |