prot_M-pyrifera_M_contig75090.17736.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig75090.17736.1
Unique Nameprot_M-pyrifera_M_contig75090.17736.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length174
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig75090.17736.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 133..174
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 103..113
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..37
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 38..62
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 63..81
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 114..132
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 82..102
NoneNo IPR availableTMHMMTMhelixcoord: 34..56
NoneNo IPR availableTMHMMTMhelixcoord: 114..131
NoneNo IPR availableTMHMMTMhelixcoord: 77..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig75090contigM-pyrifera_M_contig75090:311..832 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig75090.17736.1mRNA_M-pyrifera_M_contig75090.17736.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig75090 311..832 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig75090.17736.1 ID=prot_M-pyrifera_M_contig75090.17736.1|Name=mRNA_M-pyrifera_M_contig75090.17736.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=174bp
IFQCSFLIFPFVNMLMNIKLAHKSVSLISEKPIINWPITSLIVCTSTTVD
AIFSLWTAGDIYNSIERKATKTGADEYLNARWPYLAVLLTLVSIVLGLLS
SSSRYYIATETMDWFVLAICIAINATIFESYAQRDLAGKIFESGACFFSP
DKKLISSCRNLRRTIEILDVADND
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