mRNA_M-pyrifera_M_contig7508.17734.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig7508.17734.1 vs. uniprot
Match: D8LQL4_ECTSI (Carbamoyl-phosphate synthase (Glutamine-hydrolyzing) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQL4_ECTSI) HSP 1 Score: 169 bits (427), Expect = 8.990e-47 Identity = 81/89 (91.01%), Postives = 88/89 (98.88%), Query Frame = 1 Query: 1 AIKALKEEGIEVVLMNPNIASVQTNTDNKSPHKADQVFFLPVTPEFVEQIIRREKPDGIVISMGGQTALNCAVQLYEAGILEKYNVQVI 267 AIKALKEEGIEV+LMNPNIASVQTNTDNKSPHKADQVFFLPVTPEFVE +I+REKPDGIV+SMGGQTALNCAVQL+EAGILEKYNV+V+ Sbjct: 423 AIKALKEEGIEVILMNPNIASVQTNTDNKSPHKADQVFFLPVTPEFVEHVIKREKPDGIVVSMGGQTALNCAVQLHEAGILEKYNVKVL 511
BLAST of mRNA_M-pyrifera_M_contig7508.17734.1 vs. uniprot
Match: A0A835YNS3_9STRA (Carbamoyl-phosphate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNS3_9STRA) HSP 1 Score: 151 bits (382), Expect = 1.050e-40 Identity = 71/89 (79.78%), Postives = 82/89 (92.13%), Query Frame = 1 Query: 1 AIKALKEEGIEVVLMNPNIASVQTNTDNKSPHKADQVFFLPVTPEFVEQIIRREKPDGIVISMGGQTALNCAVQLYEAGILEKYNVQVI 267 AIKALKEEG+EV+LMNPNIASVQTN D KS HKAD+VFFLPV P +VEQ+++REKPDGIVISMGGQTALNCAV+LY+AG EKYNV+V+ Sbjct: 428 AIKALKEEGVEVILMNPNIASVQTNVDTKSLHKADEVFFLPVNPHYVEQVLKREKPDGIVISMGGQTALNCAVELYKAGTFEKYNVKVL 516
BLAST of mRNA_M-pyrifera_M_contig7508.17734.1 vs. uniprot
Match: A0A1E7FDJ2_9STRA (Carbamyl phosphate synthetase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FDJ2_9STRA) HSP 1 Score: 150 bits (379), Expect = 2.670e-40 Identity = 70/89 (78.65%), Postives = 83/89 (93.26%), Query Frame = 1 Query: 1 AIKALKEEGIEVVLMNPNIASVQTNTDNKSPHKADQVFFLPVTPEFVEQIIRREKPDGIVISMGGQTALNCAVQLYEAGILEKYNVQVI 267 AIKALKEEG EVVLMNPNIASVQTN DNKS KAD +FFLPVTPEFVE++I++EKPDGIV+SMGGQTALNCAV++Y+AGI +KYN++V+ Sbjct: 449 AIKALKEEGKEVVLMNPNIASVQTNMDNKSEFKADHIFFLPVTPEFVEEVIKKEKPDGIVVSMGGQTALNCAVEMYKAGIFDKYNIKVL 537
BLAST of mRNA_M-pyrifera_M_contig7508.17734.1 vs. uniprot
Match: A0A7S2K3S8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K3S8_9STRA) HSP 1 Score: 148 bits (373), Expect = 6.030e-40 Identity = 71/89 (79.78%), Postives = 82/89 (92.13%), Query Frame = 1 Query: 1 AIKALKEEGIEVVLMNPNIASVQTNTDNKSPHKADQVFFLPVTPEFVEQIIRREKPDGIVISMGGQTALNCAVQLYEAGILEKYNVQVI 267 AIKALKEEG EVVLMNPNIASVQTN D+KS KAD VFF+PVTP+FVE+II+REKPDGIV+SMGGQTALNCAV+LY+ GI +KYNV+V+ Sbjct: 412 AIKALKEEGKEVVLMNPNIASVQTNMDDKSESKADHVFFVPVTPDFVEEIIKREKPDGIVVSMGGQTALNCAVELYQKGIFDKYNVEVL 500
BLAST of mRNA_M-pyrifera_M_contig7508.17734.1 vs. uniprot
Match: A0A7S2YNC7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YNC7_9STRA) HSP 1 Score: 149 bits (376), Expect = 6.710e-40 Identity = 70/89 (78.65%), Postives = 84/89 (94.38%), Query Frame = 1 Query: 1 AIKALKEEGIEVVLMNPNIASVQTNTDNKSPHKADQVFFLPVTPEFVEQIIRREKPDGIVISMGGQTALNCAVQLYEAGILEKYNVQVI 267 AIKALKEEG+EVVLMNPNIASVQTN+D+KS KAD VFFLPVTPEFVE++I++EKPDGIVISMGGQTALNCA++++EAG L+KY V+V+ Sbjct: 427 AIKALKEEGVEVVLMNPNIASVQTNSDDKSESKADHVFFLPVTPEFVEEVIKKEKPDGIVISMGGQTALNCAIEMWEAGTLQKYGVKVL 515
BLAST of mRNA_M-pyrifera_M_contig7508.17734.1 vs. uniprot
Match: B7GEG8_PHATC (CPS III, carbamoyl-phosphate synthase mitochindrial n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GEG8_PHATC) HSP 1 Score: 149 bits (376), Expect = 6.770e-40 Identity = 69/89 (77.53%), Postives = 83/89 (93.26%), Query Frame = 1 Query: 1 AIKALKEEGIEVVLMNPNIASVQTNTDNKSPHKADQVFFLPVTPEFVEQIIRREKPDGIVISMGGQTALNCAVQLYEAGILEKYNVQVI 267 AIKALKEEG+EVVLMNPNIASVQTNTD+KS KAD VFFLPVTPEFVE++I++EKPDG++ISMGGQTALNCAVQ++E+G EKY V+++ Sbjct: 400 AIKALKEEGLEVVLMNPNIASVQTNTDDKSASKADHVFFLPVTPEFVEEVIKKEKPDGVIISMGGQTALNCAVQMHESGTFEKYGVKIL 488
BLAST of mRNA_M-pyrifera_M_contig7508.17734.1 vs. uniprot
Match: A0A7S1Y1L5_9STRA (Hypothetical protein n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y1L5_9STRA) HSP 1 Score: 149 bits (375), Expect = 9.210e-40 Identity = 72/89 (80.90%), Postives = 82/89 (92.13%), Query Frame = 1 Query: 1 AIKALKEEGIEVVLMNPNIASVQTNTDNKSPHKADQVFFLPVTPEFVEQIIRREKPDGIVISMGGQTALNCAVQLYEAGILEKYNVQVI 267 AIKALKEEG EVVLMNPNIASVQTN D+KS KAD VFFLPVTPEFVE+II++EKPDGIV+SMGGQTALNCAV+LY+ GI +KYNV+V+ Sbjct: 167 AIKALKEEGKEVVLMNPNIASVQTNMDSKSTSKADHVFFLPVTPEFVEEIIKKEKPDGIVVSMGGQTALNCAVELYQNGIFDKYNVEVL 255
BLAST of mRNA_M-pyrifera_M_contig7508.17734.1 vs. uniprot
Match: A0A7S2UQ81_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UQ81_9STRA) HSP 1 Score: 149 bits (375), Expect = 9.250e-40 Identity = 71/89 (79.78%), Postives = 82/89 (92.13%), Query Frame = 1 Query: 1 AIKALKEEGIEVVLMNPNIASVQTNTDNKSPHKADQVFFLPVTPEFVEQIIRREKPDGIVISMGGQTALNCAVQLYEAGILEKYNVQVI 267 AIKALKEEG EV+LMNPNIASVQTN D+KS KAD V+FLPVTP+FVE+II++EKPDGIV+SMGGQTALNCAV+LY AGI +KYNVQV+ Sbjct: 465 AIKALKEEGKEVILMNPNIASVQTNMDDKSASKADHVYFLPVTPDFVEEIIKKEKPDGIVVSMGGQTALNCAVELYRAGIFDKYNVQVL 553
BLAST of mRNA_M-pyrifera_M_contig7508.17734.1 vs. uniprot
Match: A0A448ZEC0_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZEC0_9STRA) HSP 1 Score: 147 bits (370), Expect = 4.370e-39 Identity = 70/89 (78.65%), Postives = 81/89 (91.01%), Query Frame = 1 Query: 1 AIKALKEEGIEVVLMNPNIASVQTNTDNKSPHKADQVFFLPVTPEFVEQIIRREKPDGIVISMGGQTALNCAVQLYEAGILEKYNVQVI 267 AIKALKEEG EVVLMNPNIASVQTN D+KS KAD FFLPVTPEFVE++I++EKPDGIV+SMGGQTALNCAV++YEAG L+KY V+V+ Sbjct: 372 AIKALKEEGKEVVLMNPNIASVQTNMDSKSEFKADHTFFLPVTPEFVEEVIKKEKPDGIVVSMGGQTALNCAVEMYEAGTLQKYGVEVL 460
BLAST of mRNA_M-pyrifera_M_contig7508.17734.1 vs. uniprot
Match: A0A7S1B966_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B966_9STRA) HSP 1 Score: 147 bits (370), Expect = 4.370e-39 Identity = 70/89 (78.65%), Postives = 81/89 (91.01%), Query Frame = 1 Query: 1 AIKALKEEGIEVVLMNPNIASVQTNTDNKSPHKADQVFFLPVTPEFVEQIIRREKPDGIVISMGGQTALNCAVQLYEAGILEKYNVQVI 267 AIKALKEEG+EVVLMNPNIASVQTN D+KS KAD VFFLPVTP FVE++I+REKPDGIV+SMGGQTALNCAV++Y AG +KYN+QV+ Sbjct: 457 AIKALKEEGMEVVLMNPNIASVQTNVDDKSETKADHVFFLPVTPSFVEEVIKREKPDGIVVSMGGQTALNCAVEMYLAGTFDKYNLQVL 545 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7508.17734.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7508.17734.1 >prot_M-pyrifera_M_contig7508.17734.1 ID=prot_M-pyrifera_M_contig7508.17734.1|Name=mRNA_M-pyrifera_M_contig7508.17734.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=89bp AIKALKEEGIEVVLMNPNIASVQTNTDNKSPHKADQVFFLPVTPEFVEQIback to top mRNA from alignment at M-pyrifera_M_contig7508:11903..12753+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig7508.17734.1 ID=mRNA_M-pyrifera_M_contig7508.17734.1|Name=mRNA_M-pyrifera_M_contig7508.17734.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=851bp|location=Sequence derived from alignment at M-pyrifera_M_contig7508:11903..12753+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig7508:11903..12753+ >mRNA_M-pyrifera_M_contig7508.17734.1 ID=mRNA_M-pyrifera_M_contig7508.17734.1|Name=mRNA_M-pyrifera_M_contig7508.17734.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=534bp|location=Sequence derived from alignment at M-pyrifera_M_contig7508:11903..12753+ (Macrocystis pyrifera P11B4 male)back to top |