mRNA_M-pyrifera_M_contig75020.17725.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig75020.17725.1 vs. uniprot
Match: A0A6H5K3I1_9PHAE (Integrase catalytic domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3I1_9PHAE) HSP 1 Score: 87.0 bits (214), Expect = 2.440e-17 Identity = 50/125 (40.00%), Postives = 70/125 (56.00%), Query Frame = 1 Query: 1 GREEWVADSGATFHVTGNPFSMVNCTPPPPGKSRVVVGNMRSLKIEYFGQILIVMH-SSQG---DAQVRLMDVAYVPGVRFNLFSLHAVMLKCPVTLDAQGAHTLNGQLSFVRRDAGSYVDATRI 363 GRE++ ADSGAT + M + P P GK + VGN L+++ G++ + H QG D +V++ DV VPG+ FNLFSLH K + LD G H +G+LSF D G + ATR+ Sbjct: 636 GREKFWADSGATNTFVSSSHQMFDLRPVPTGKEYIQVGNGTYLRVQCVGKVNMAFHMQDQGGERDFRVQMSDVYVVPGITFNLFSLHHTQRKQRIVLDETGVHLFDGRLSFAYSDVGCSLWATRL 760
BLAST of mRNA_M-pyrifera_M_contig75020.17725.1 vs. uniprot
Match: A0A6H5JCK7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK7_9PHAE) HSP 1 Score: 82.8 bits (203), Expect = 7.360e-16 Identity = 49/125 (39.20%), Postives = 67/125 (53.60%), Query Frame = 1 Query: 1 GREEWVADSGATFHVTGNPFSMVNCTPPPPGKSRVVVGNMRSLKIEYFGQILIVMH-SSQG---DAQVRLMDVAYVPGVRFNLFSLHAVMLKCPVTLDAQGAHTLNGQLSFVRRDAGSYVDATRI 363 GRE + ADSGAT + M + P P GK + VGN L+++ G + + H QG D V++ DV VPG+ FNLFSLH + K + LD G H +G+ SF D G + ATR+ Sbjct: 334 GRENFWADSGATNTFVSSSHQMFDLRPVPTGKEYIQVGNGAYLRVQCLGTVNMAFHMQDQGGERDFCVQMSDVYVVPGITFNLFSLHHMQRKQRIVLDETGVHLFDGKRSFAYSDVGCSLWATRL 458
BLAST of mRNA_M-pyrifera_M_contig75020.17725.1 vs. uniprot
Match: A0A6H5KCR3_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCR3_9PHAE) HSP 1 Score: 81.3 bits (199), Expect = 2.540e-15 Identity = 43/105 (40.95%), Postives = 58/105 (55.24%), Query Frame = 1 Query: 64 MVNCTPPPPGKSRVVVGNMRSLKIEYFGQILIVMHSSQG-----DAQVRLMDVAYVPGVRFNLFSLHAVMLKCPVTLDAQGAHTLNGQLSFVRRDAGSYVDATRI 363 M N +P PPGK + VGN L++E G + + H + G D V+L DV VPG+ FNL+SLH + LD +G H G+LSF D G Y+ ATR+ Sbjct: 1 MYNISPVPPGKEYIRVGNGAHLRVECVGSVNLAFHMAGGRSGEVDFCVQLTDVYVVPGISFNLYSLHQTQKTHRIMLDERGVHLFGGRLSFAYSDIGCYLSATRL 105
BLAST of mRNA_M-pyrifera_M_contig75020.17725.1 vs. uniprot
Match: A0A6H5JKY9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKY9_9PHAE) HSP 1 Score: 81.3 bits (199), Expect = 2.550e-15 Identity = 44/105 (41.90%), Postives = 58/105 (55.24%), Query Frame = 1 Query: 64 MVNCTPPPPGKSRVVVGNMRSLKIEYFGQILIVMHSSQG-----DAQVRLMDVAYVPGVRFNLFSLHAVMLKCPVTLDAQGAHTLNGQLSFVRRDAGSYVDATRI 363 M N +P PPGK + VGN L++E G + + H + G D V+L DV VPG+ FNLFSLH K + LD +G H G+LSF D G + ATR+ Sbjct: 1 MYNISPVPPGKEYIRVGNGAHLRVECVGSVNLAFHMAGGRSREVDFCVQLTDVYVVPGISFNLFSLHQTQKKHRIMLDERGVHLFGGRLSFAYSDIGCSLSATRL 105
BLAST of mRNA_M-pyrifera_M_contig75020.17725.1 vs. uniprot
Match: A0A6H5JW31_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW31_9PHAE) HSP 1 Score: 74.3 bits (181), Expect = 5.560e-13 Identity = 42/107 (39.25%), Postives = 57/107 (53.27%), Query Frame = 1 Query: 64 MVNCTPPPPGKSRVVVGNMRSLKIEYFGQILIVMH----SSQGDAQVRLMDVAYVPGVRFNLFSLHAVMLKCPVTLDAQGAHTLNGQLSFVRRDAGSYVDATRIVET 372 M + P P G+ + VGN L+++ G + H S + D V++ DV VPG+ FNLFSLH + +TLD G H NGQLSF D G + ATR+ T Sbjct: 1 MFDMKPIPAGREFIQVGNSAYLRVQCVGSNNMTFHMPDPSGEADFCVQISDVYVVPGITFNLFSLHHTQRRQRITLDDNGVHLFNGQLSFAYSDVGCSLWATRLPPT 107
BLAST of mRNA_M-pyrifera_M_contig75020.17725.1 vs. uniprot
Match: A0A6H5JU31_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU31_9PHAE) HSP 1 Score: 70.9 bits (172), Expect = 1.100e-11 Identity = 41/104 (39.42%), Postives = 57/104 (54.81%), Query Frame = 1 Query: 64 MVNCTPPPPGKSRVVVGNMRSLKIEYFGQILIVMH-SSQG---DAQVRLMDVAYVPGVRFNLFSLHAVMLKCPVTLDAQGAHTLNGQLSFVRRDAGSYVDATRI 363 M + P P GK + VGN L+++ G++ + H QG D V++ DV VPG+ FNLFSLH K + LD G H +G+LSF D G + ATR+ Sbjct: 1 MFDLRPVPTGKEYIQVGNGAYLRVQCVGKVNMAFHMQDQGGELDFCVQMSDVYVVPGITFNLFSLHHTQRKQRIVLDETGVHLFDGRLSFAYSDVGCSLWATRL 104
BLAST of mRNA_M-pyrifera_M_contig75020.17725.1 vs. uniprot
Match: A0A6H5JX85_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX85_9PHAE) HSP 1 Score: 68.6 bits (166), Expect = 6.690e-11 Identity = 39/104 (37.50%), Postives = 55/104 (52.88%), Query Frame = 1 Query: 64 MVNCTPPPPGKSRVVVGNMRSLKIEYFGQILIVMH-SSQG---DAQVRLMDVAYVPGVRFNLFSLHAVMLKCPVTLDAQGAHTLNGQLSFVRRDAGSYVDATRI 363 M + P P GK + VGN L+++ G + + H QG D V++ DV VPG+ FNLFSLH K + LD G H +G++ F D G + ATR+ Sbjct: 1 MFDLRPVPTGKEYIQVGNGACLRVQCLGTVNMAFHMQDQGGERDVCVQMSDVYVVPGITFNLFSLHHTQRKQRIVLDETGVHLFDGKIFFAYSDVGCSLWATRL 104
BLAST of mRNA_M-pyrifera_M_contig75020.17725.1 vs. uniprot
Match: A0A6H5KNR6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNR6_9PHAE) HSP 1 Score: 63.5 bits (153), Expect = 1.930e-9 Identity = 38/104 (36.54%), Postives = 54/104 (51.92%), Query Frame = 1 Query: 64 MVNCTPPPPGKSRVVVGNMRSLKIEYFGQILIVMH-SSQG---DAQVRLMDVAYVPGVRFNLFSLHAVMLKCPVTLDAQGAHTLNGQLSFVRRDAGSYVDATRI 363 M + P P K + VGN L ++ G + + H QG D V++ DV VPG+ FNLFSLH + K + LD G H +G++ F D G + ATR+ Sbjct: 1 MFDSRPVPTSKEYIQVGNGAYLCVQCLGTVNMAFHMQDQGGERDFCVQMSDVYVVPGITFNLFSLHHMQRKQRIVLDETGVHLFDGKIFFAYSDVGCSLWATRL 104
BLAST of mRNA_M-pyrifera_M_contig75020.17725.1 vs. uniprot
Match: A0A5K0Y1U5_9MAGN (Integrase catalytic domain-containing protein (Fragment) n=4 Tax=Nymphaea colorata TaxID=210225 RepID=A0A5K0Y1U5_9MAGN) HSP 1 Score: 57.4 bits (137), Expect = 5.580e-7 Identity = 34/91 (37.36%), Postives = 52/91 (57.14%), Query Frame = 1 Query: 10 EWVADSGATFHVTGNPFSMVNCTPPPPGKSRVVVGNMRSLKIEYFGQILIVMHSSQGDAQVRLMDVAYVPGVRFNLFSLHAVMLKCPVTLD 282 EW+ADSGA+ H+TG+ + N + G RV++GN +SL I + GQ +V+H S + L V YVP ++ NL S+ + P T + Sbjct: 349 EWLADSGASSHMTGDAGKISNKSIYH-GSDRVIIGNGKSLPITHTGQGNLVVHGSY----IPLSKVLYVPQLKKNLLSVSQITTDLPYTFE 434
BLAST of mRNA_M-pyrifera_M_contig75020.17725.1 vs. uniprot
Match: UPI0010BD1B7C (uncharacterized protein LOC114828096 n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI0010BD1B7C) HSP 1 Score: 55.1 bits (131), Expect = 3.370e-6 Identity = 34/95 (35.79%), Postives = 46/95 (48.42%), Query Frame = 1 Query: 10 EWVADSGATFHVTGNPFSMVNCTPPPPGKSRVVVGNMRSLKIEYFGQILIVMHSSQGDAQVRLMDVAYVPGVRFNLFSLHAVMLK-CPVTLDAQG 291 EW+ DSGAT H+TG ++ + +S V N L+ E G + I G+ VRL D YVPG+ NL S+ + K VT D G Sbjct: 454 EWIVDSGATSHMTGQRTLFLSLSEEVLDRS-VATANDEMLRCEGIGDVQITCVFDDGECPVRLRDALYVPGLTVNLISVKQLTAKGFSVTFDKSG 547 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig75020.17725.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig75020.17725.1 >prot_M-pyrifera_M_contig75020.17725.1 ID=prot_M-pyrifera_M_contig75020.17725.1|Name=mRNA_M-pyrifera_M_contig75020.17725.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=130bp GREEWVADSGATFHVTGNPFSMVNCTPPPPGKSRVVVGNMRSLKIEYFGQback to top mRNA from alignment at M-pyrifera_M_contig75020:444..833+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig75020.17725.1 ID=mRNA_M-pyrifera_M_contig75020.17725.1|Name=mRNA_M-pyrifera_M_contig75020.17725.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=390bp|location=Sequence derived from alignment at M-pyrifera_M_contig75020:444..833+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig75020:444..833+ >mRNA_M-pyrifera_M_contig75020.17725.1 ID=mRNA_M-pyrifera_M_contig75020.17725.1|Name=mRNA_M-pyrifera_M_contig75020.17725.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=780bp|location=Sequence derived from alignment at M-pyrifera_M_contig75020:444..833+ (Macrocystis pyrifera P11B4 male)back to top |