mRNA_M-pyrifera_M_contig7499.17715.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig7499.17715.1 vs. uniprot
Match: D7FTS4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTS4_ECTSI) HSP 1 Score: 447 bits (1150), Expect = 1.610e-145 Identity = 300/595 (50.42%), Postives = 356/595 (59.83%), Query Frame = 1 Query: 502 VSRPFRIVTNANCRHSGPIEAEASKLGATASGNGSI----LTLVGFEAICRLRHLLVLACESWAIRDGAALRLPAAELLSCAPTAARRYLDEVYKAMTGPLRTQV-------DTQVELMEDLADEIILDTVLKDAFFSTGDIFFELARRLQRTAATATTAAGVQRVLIEGGPDSNLGGGRDSRRSAGADAQLLSATAAVFDAAFFHSMQLPQKMDVFMLSTPMSLPKIADNIVHLYCSLKRRWLGN--HGGDGXXXXXXXXXHGSG------ELTHEDSRRDLYTISNITLDRVVRALNGISDAIILFNVEHEHLGIVRNLVGLGLGSACRAGIQPAASDALGFLVAVNDRVVFLIEELDRREQKQRHLEKDAEQRGLLSAAPETPSRAGGKGK-KNRSPFFKPMAGPIGNHGRRGAKKSLLPPRSSLEKFVPLHRLLDGARPEDN----------GEVATAAAVADEINSATDGNDLEVGGDRASGEAGKRVGRARSSSSSSTPAPRL------QGGSPRDFLSSAPVLLHSYAKLLNALVCGSYNLRAAFSSSCEADLRNIRRRGGYLDVLAGLDDGAPRKVFREAARFLHEI 2178 VSRPFRI H A+ G S +G+ + LVGFE ICRLRH LV+ACESWAIR+G R A ELLSCAP AA+RYL V + MTGPLR QV D QVELM+DLADE+ILD V+K+AFFSTGDIFFE++RRL+ AA AT AAG V G + G D RR+ +DA+L+SATAAV DAAFFHS+Q+PQ++D+ PMSLP +A+++V +YC+L RR + N G D G E ED+ L +S LDRVVRALNGISD + LFN+EHEHLGIVRNLVG+GLG R GIQPAASDAL F+V VNDR V LIE+LDRREQ++R LE+ LL+ P + S K K K RS F + G + RR L PP ++E V L + D + N + A V + S D G G G R +S S P P Q SPR FLSSAPVLLHSYAKLLNALVCGSYNLR AF SSCE D+RNI R GGYLDVL+ LD GAPR VFR+ A FLHEI Sbjct: 2 VSRPFRITAAKKLAHCESAVGSAADKGPETSASGADEHRHILLVGFEDICRLRHFLVVACESWAIRNGVGTR--AKELLSCAPVAAQRYLAGVLEVMTGPLRDQVLQTEGTVDAQVELMQDLADEMILDAVVKEAFFSTGDIFFEISRRLE--AAAATVAAG-SAVNTAAGEIAFRHDGFDGRRAVVSDARLISATAAVLDAAFFHSIQIPQRIDLVGRPKPMSLPAVAEHLVFVYCALCRRIVTNCEDGADNSDIDTGGRNDLKGFSPAGVERLAEDAMSPLDALSTGVLDRVVRALNGISDVVSLFNIEHEHLGIVRNLVGVGLGVKVRVGIQPAASDALAFVVRVNDRAVDLIEDLDRREQERRQLEEAR----LLALGPVSVSPTSEKNKGKKRSVFAR--LGSLSPRPRRSVTPPLSPPSPAVEPPVGLPPINDNSDVRTNYILEGGSGSASKTTARAGVPKQEKSDVD----NASGGLLGGLVGLEGRRGGGNSVGSPPPPSATQCFESQVSSPRGFLSSAPVLLHSYAKLLNALVCGSYNLREAFFSSCEVDIRNIGREGGYLDVLSRLDGGAPRLVFRQTALFLHEI 581 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7499.17715.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7499.17715.1 >prot_M-pyrifera_M_contig7499.17715.1 ID=prot_M-pyrifera_M_contig7499.17715.1|Name=mRNA_M-pyrifera_M_contig7499.17715.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=734bp SRKPSLLLEGGHDDDETSGCMDAVSAFLLAIASASPAASKPESQQVGGVLback to top mRNA from alignment at M-pyrifera_M_contig7499:2326..6589- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig7499.17715.1 ID=mRNA_M-pyrifera_M_contig7499.17715.1|Name=mRNA_M-pyrifera_M_contig7499.17715.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4264bp|location=Sequence derived from alignment at M-pyrifera_M_contig7499:2326..6589- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig7499:2326..6589- >mRNA_M-pyrifera_M_contig7499.17715.1 ID=mRNA_M-pyrifera_M_contig7499.17715.1|Name=mRNA_M-pyrifera_M_contig7499.17715.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=4404bp|location=Sequence derived from alignment at M-pyrifera_M_contig7499:2326..6589- (Macrocystis pyrifera P11B4 male)back to top |