prot_M-pyrifera_M_contig74924.17705.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig74924.17705.1
Unique Name	prot_M-pyrifera_M_contig74924.17705.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	239

Homology

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BLAST of mRNA_M-pyrifera_M_contig74924.17705.1 vs. uniprot
Match: A0A5C5VA43_9BACT (Uncharacterized protein n=1 Tax=Posidoniimonas corsicana TaxID=1938618 RepID=A0A5C5VA43_9BACT)

HSP 1 Score: 80.9 bits (198), Expect = 4.980e-14
Identity = 72/263 (27.38%), Postives = 134/263 (50.95%), Query Frame = 0

Query:    2 QIIAQGRLLPAKGLISLGGTPGDRV--VDLKVKPGQPIAAEDELAILLSYELHGMKVAGLEEQKKDAQDKLKIEQKTAGFQLQKANLAVEHAKNQQELLQGAQQQIGLLEKQRMLELNKLQKIRQLRDENPRLITESQVEAQQLLTDKLAIDIESANLELRNNTKAAAAAVKSAEQDQKAAQEKVEMVDASHLIAALDKQIEAARLQQEQSKIVSPIAG-----------------------TVMKIFVQQGDTIARTPVLQV 239
            QI A G L PA G+IS+ GTPGD++  +D KV   QP  A+  L +L SY+    ++  L  ++  A +K +++   A  QL+ A   V+ A+ +Q   +   +Q+  L++   +  ++L  I +LR+ +P L+T+ QV  Q+    +   +++ A   +    +AA AA+++A  +   A+  V+ +  +  + A+DK+I  A+    QS + +P A                        TV+K+F + G+ +++ PV+ V
Sbjct:   37 QIFALGTLQPAGGVISISGTPGDKLKALDPKVVENQPAPADGLLGVLASYDARHAQLEALRTRRTLADEKQRVDLLLAEAQLRGARAKVKEAEAKQXEARLQSEQVKHLDEAAAIARDELDSIVELRESDPELVTDHQVRKQRNRVARAESEVKLAQQRIAPMAEAAEAALQAAHSNVXXAEVSVDSLRKNGALEAIDKEIAVAQQALAQSVLWAPGADQSSVELDATPTDNQDAVDQPRRYTVLKVFTKPGELVSQLPVMNV 299

[Close]

BLAST of mRNA_M-pyrifera_M_contig74924.17705.1 vs. uniprot
Match: A0A5C5XUP1_9BACT (Uncharacterized protein n=1 Tax=Posidoniimonas polymericola TaxID=2528002 RepID=A0A5C5XUP1_9BACT)

HSP 1 Score: 61.6 bits (148), Expect = 2.030e-7
Identity = 64/260 (24.62%), Postives = 121/260 (46.54%), Query Frame = 0

Query:    3 IIAQGRLLPAKGLISLGGTPGDRV--VDLKVKPGQPIAAEDELAILLSYELHGMKVAGLEEQKKDAQDKLKIEQKTAGFQLQKANLAVEHAKNQQELLQGAQQQIGLLEKQRMLELNKLQKIRQLRDENPRLITESQVEAQQLLTDKLAIDIESANLELRNNTKAAAAAVKSAEQDQKAAQEKVEMVDASHLIAALDKQIEAARLQQEQSKIVSPIAGT-----------------------VMKIFVQQGDTIARTPVL 237
            + A G L P  G+IS+ GTPGD++   D +V   +   A+  L +L SY+    ++  L  +++ A++K +++   A  QL+ A   V+ A+  Q   +    Q+  LE+   +  ++L+ I  LR+ +P L+TE QV  Q+    +   +++ A   +   ++AA AA+                +  +  + A+D +I  A+    QS + +P A T                       V+KIF + G+ +++ PV+
Sbjct:   41 VYALGTLQPTSGVISITGTPGDKLKSFDPQVAENELTPADGRLGVLASYDARHAQLEALRTRRRLAEEKQQVDLLLAQAQLRGARAKVKQAEANQAXXRLQSAQVKNLEEAAAIARDELESIEDLRESDPELVTEHQVRKQRNRVARAESEVQLAAQRIAPMSEAAEAALXXXXXXXXXXXXXXXSLKKNGTLDAIDTEIAVAQQSLAQSVLWAPGADTSHAEGDAPTAAPDEPQPEPQRYTVLKIFTKPGEMVSQLPVI 300

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig74924.17705.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig74924.17705.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A5C5VA43_9BACT	4.980e-14	27.38	Uncharacterized protein n=1 Tax=Posidoniimonas cor...	[more]
A0A5C5XUP1_9BACT	2.030e-7	24.62	Uncharacterized protein n=1 Tax=Posidoniimonas pol...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 91..111
None	No IPR available	COILS	Coil	Coil	coord: 56..76
None	No IPR available	GENE3D	2.40.50.100		coord: 177..238 e-value: 3.2E-6 score: 28.7
None	No IPR available	PANTHER	PTHR32347:SF27		coord: 3..237
None	No IPR available	PANTHER	PTHR32347	FAMILY NOT NAMED	coord: 3..237

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig74924	contig	M-pyrifera_M_contig74924:349..1065 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig74924.17705.1	mRNA_M-pyrifera_M_contig74924.17705.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig74924 349..1065 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig74924.17705.1 ID=prot_M-pyrifera_M_contig74924.17705.1|Name=mRNA_M-pyrifera_M_contig74924.17705.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=239bp
TQIIAQGRLLPAKGLISLGGTPGDRVVDLKVKPGQPIAAEDELAILLSYE
LHGMKVAGLEEQKKDAQDKLKIEQKTAGFQLQKANLAVEHAKNQQELLQG
AQQQIGLLEKQRMLELNKLQKIRQLRDENPRLITESQVEAQQLLTDKLAI
DIESANLELRNNTKAAAAAVKSAEQDQKAAQEKVEMVDASHLIAALDKQI
EAARLQQEQSKIVSPIAGTVMKIFVQQGDTIARTPVLQV