prot_M-pyrifera_M_contig749.17704.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig749.17704.1
Unique Name	prot_M-pyrifera_M_contig749.17704.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	104

Homology

[Close]

BLAST of mRNA_M-pyrifera_M_contig749.17704.1 vs. uniprot
Match: D7FX15_ECTSI (RRM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX15_ECTSI)

HSP 1 Score: 212 bits (540), Expect = 1.160e-63
Identity = 96/104 (92.31%), Postives = 100/104 (96.15%), Query Frame = 0

Query:    1 EYFGQYGEIAKLVINHHQGVSTDDPRYGSASAYITFQRQEDAWAAICSVDGFRLMGRTIRASFGTSKYCNSFLRNLPCNNPDCLYLHALGDEGDRFTKDEVQLG 104
            EYFGQYGEIAKLVINHH+GV  DDPRYGSASAYITF+RQEDAWAA+CSVDGFRLMGRTIRASFGT+KYCNSFLRNLPCNNPDCLYLH LGDE DRFTKDEVQLG
Sbjct:   99 EYFGQYGEIAKLVINHHEGVPQDDPRYGSASAYITFRRQEDAWAAVCSVDGFRLMGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGDEEDRFTKDEVQLG 202

[Close]

BLAST of mRNA_M-pyrifera_M_contig749.17704.1 vs. uniprot
Match: A0A6H5JE06_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE06_9PHAE)

HSP 1 Score: 207 bits (526), Expect = 1.100e-60
Identity = 96/107 (89.72%), Postives = 100/107 (93.46%), Query Frame = 0

Query:    1 EYFGQYGEIAKLVINHHQGVSTDDPRYGSASAYITFQRQEDAWAAICSVDGFRLMGRTIRASFGTSKYCNSFLRNLPCNNPDCLYLHALGDEGDRFTK---DEVQLG 104
            EYFGQYGEIAKLVINHH+GV  DDPRYGSASAYITF+RQEDAWAA+CSVDGFRLMGRTIRASFGT+KYCNSFLRNLPCNNPDCLYLH LGDE DRFTK   DEVQLG
Sbjct:   98 EYFGQYGEIAKLVINHHEGVPQDDPRYGSASAYITFRRQEDAWAAVCSVDGFRLMGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGDEEDRFTKAGSDEVQLG 204

[Close]

BLAST of mRNA_M-pyrifera_M_contig749.17704.1 vs. uniprot
Match: A0A836CMF8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMF8_9STRA)

HSP 1 Score: 169 bits (428), Expect = 2.090e-52
Identity = 74/100 (74.00%), Postives = 86/100 (86.00%), Query Frame = 0

Query:    2 YFGQYGEIAKLVINHHQGVSTDDPRYGSASAYITFQRQEDAWAAICSVDGFRLMGRTIRASFGTSKYCNSFLRNLPCNNPDCLYLHALGDEGDRFTKDEV 101
            YFGQYG IAK+V+NHH GV+ DDPR+GSASAY+TF  +EDAW+AI +VDGF L GR +RASFGT+KYCNSFLR L CNN DCLYLH LGDE DRFTK+E+
Sbjct:   28 YFGQYGRIAKIVVNHHHGVNADDPRHGSASAYVTFAHKEDAWSAIKAVDGFWLEGRHVRASFGTTKYCNSFLRGLACNNGDCLYLHELGDERDRFTKEEI 127

[Close]

BLAST of mRNA_M-pyrifera_M_contig749.17704.1 vs. uniprot
Match: A0A7S4D5P1_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D5P1_HETAK)

HSP 1 Score: 154 bits (388), Expect = 4.440e-42
Identity = 67/104 (64.42%), Postives = 85/104 (81.73%), Query Frame = 0

Query:    1 EYFGQYGEIAKLVINHHQGVSTDDPRYGSASAYITFQRQEDAWAAICSVDGFRLMGRTIRASFGTSKYCNSFLRNLPCNNPDCLYLHALGDEGDRFTKDEVQLG 104
            E+FGQYG I K+V+NH+ G    DPR+GSASAYITF  ++DA +AI +VDG++  GR IRASFGT+KYCN+FLRNLPC NP+CLYLH LGD  DR+T++E+Q G
Sbjct:  141 EFFGQYGRIHKVVVNHNHGAPPKDPRHGSASAYITFCHKDDARSAIQAVDGYQWDGRLIRASFGTTKYCNNFLRNLPCTNPECLYLHELGDSEDRYTREEIQTG 244

[Close]

BLAST of mRNA_M-pyrifera_M_contig749.17704.1 vs. uniprot
Match: A0A7S2GN38_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GN38_9STRA)

HSP 1 Score: 141 bits (355), Expect = 8.350e-37
Identity = 66/108 (61.11%), Postives = 81/108 (75.00%), Query Frame = 0

Query:    1 EYFGQYGEIAKLVINHHQGVSTDDPRYGSAS----AYITFQRQEDAWAAICSVDGFRLMGRTIRASFGTSKYCNSFLRNLPCNNPDCLYLHALGDEGDRFTKDEVQLG 104
            EYFGQ+G+I K+V+N +    + DPR  SAS    AYITF  +EDA A I +VDGF + GR +RASFGT+KYCNSFLRNL C NPDCLYLH LG+E D FTK+++Q G
Sbjct:  181 EYFGQFGKIVKVVVNRNHSGGSGDPRNASASLSASAYITFAHKEDAKACIQAVDGFWMDGRNVRASFGTTKYCNSFLRNLSCTNPDCLYLHELGEEEDSFTKEQIQSG 288

[Close]

BLAST of mRNA_M-pyrifera_M_contig749.17704.1 vs. uniprot
Match: F0ZTE2_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZTE2_DICPU)

HSP 1 Score: 132 bits (333), Expect = 1.070e-36
Identity = 57/101 (56.44%), Postives = 76/101 (75.25%), Query Frame = 0

Query:    1 EYFGQYGEIAKLVINHHQGVSTDDPRYGSASAYITFQRQEDAWAAICSVDGFRLMGRTIRASFGTSKYCNSFLRNLPCNNPDCLYLHALGDEGDRFTKDEV 101
            EYFGQYG+I K+VIN +   + + P     SAYIT+QR+EDA  AI ++DG  + GR +RASFGT+KYC+ FLR LPCNNPDC+YLH LG E D ++K+++
Sbjct:  124 EYFGQYGKILKIVINKNNIYNVNSPHGACVSAYITYQRKEDALVAIQTIDGATIEGRVLRASFGTTKYCSYFLRKLPCNNPDCMYLHELGQEDDSYSKEDI 224

[Close]

BLAST of mRNA_M-pyrifera_M_contig749.17704.1 vs. uniprot
Match: A0A835YKN6_9STRA (RING/Ubox like zinc-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKN6_9STRA)

HSP 1 Score: 132 bits (332), Expect = 1.100e-36
Identity = 60/92 (65.22%), Postives = 76/92 (82.61%), Query Frame = 0

Query:    1 EYFGQYGEIAKLVINHHQGVSTDDPRYGSASAYITFQRQEDAWAAICSVDGFRLMGRTIRASFGTSKYCNSFLRNLPCNNPDCLYLHALGDE 92
            E+FGQ+G+I K+V N +QG+   D R+GSASAYI+F  +EDA A I SVDGF L GRT++A+FGT+KYCNSFLR+LPCNN +C+YLH LGDE
Sbjct:  121 EWFGQFGKINKVVANLNQGLPPGDARHGSASAYISFVHREDARACIHSVDGFVLEGRTVKANFGTTKYCNSFLRHLPCNNNECMYLHELGDE 212

[Close]

BLAST of mRNA_M-pyrifera_M_contig749.17704.1 vs. uniprot
Match: A0A482RNX1_9ARCH (RRM domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RNX1_9ARCH)

HSP 1 Score: 130 bits (328), Expect = 2.490e-36
Identity = 55/104 (52.88%), Postives = 82/104 (78.85%), Query Frame = 0

Query:    1 EYFGQYGEIAKLVINHHQGVSTDDPRYGSASAYITFQRQEDAWAAICSVDGFRLMGRTIRASFGTSKYCNSFLRNLPCNNPDCLYLHALGDEGDRFTKDEVQLG 104
            EYFGQYG+++K++++ +       P + + SAY+TF  +EDA A I +++GF + G  +RASFGT+KYCN+++R+LPC+NPDC+YLH LG+E DRFTK+E+QLG
Sbjct:   71 EYFGQYGKVSKVIVHRNAA-----PPHHTVSAYVTFCHKEDARACIQALEGFVVEGHVLRASFGTTKYCNNYIRHLPCSNPDCVYLHELGEEEDRFTKEEIQLG 169

[Close]

BLAST of mRNA_M-pyrifera_M_contig749.17704.1 vs. uniprot
Match: B8BXU6_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXU6_THAPS)

HSP 1 Score: 130 bits (326), Expect = 8.640e-36
Identity = 59/100 (59.00%), Postives = 76/100 (76.00%), Query Frame = 0

Query:    1 EYFGQYGEIAKLVINHHQGVSTDDPRYGSASAYITFQRQEDAWAAICSVDGFRLMGRTIRASFGTSKYCNSFLRNLPCNNPDCLYLHALGDEGDRFTKDE 100
            EYFGQYG+IAK+VIN +   +  DPR  SASAY+TF  +ED  A I ++DGF   GR IRAS+GTSKYC++F++++ CNNPDC YLH +GD+ D FTK E
Sbjct:  117 EYFGQYGKIAKIVINRNH--NPGDPRRASASAYVTFVHKEDTLACILALDGFYHDGRNIRASYGTSKYCSAFIKSVKCNNPDCTYLHHMGDQEDTFTKQE 214

[Close]

BLAST of mRNA_M-pyrifera_M_contig749.17704.1 vs. uniprot
Match: A0A7S2R154_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R154_9STRA)

HSP 1 Score: 136 bits (342), Expect = 4.790e-35
Identity = 62/105 (59.05%), Postives = 80/105 (76.19%), Query Frame = 0

Query:    1 EYFGQYGEIAKLVIN-HHQGVSTDDPRYGSASAYITFQRQEDAWAAICSVDGFRLMGRTIRASFGTSKYCNSFLRNLPCNNPDCLYLHALGDEGDRFTKDEVQLG 104
            EYFGQ G++AK+VIN +H G    DPR  SASAY+TF  +ED  A I ++DGF L GR IRAS+GTSKYC++F++N+ CNNPDC YLH +G++ D FTK E+Q G
Sbjct:   75 EYFGQNGKVAKIVINRNHNG--NGDPRRASASAYVTFVHKEDTLACILALDGFYLEGRNIRASYGTSKYCSAFIKNVRCNNPDCTYLHGMGEDEDTFTKQEIQAG 177

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig749.17704.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig749.17704.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FX15_ECTSI	1.160e-63	92.31	RRM domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5JE06_9PHAE	1.100e-60	89.72	RRM domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A836CMF8_9STRA	2.090e-52	74.00	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
A0A7S4D5P1_HETAK	4.440e-42	64.42	Hypothetical protein (Fragment) n=2 Tax=Heterosigm...	[more]
A0A7S2GN38_9STRA	8.350e-37	61.11	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
F0ZTE2_DICPU	1.070e-36	56.44	Uncharacterized protein n=1 Tax=Dictyostelium purp...	[more]
A0A835YKN6_9STRA	1.100e-36	65.22	RING/Ubox like zinc-binding domain-containing prot...	[more]
A0A482RNX1_9ARCH	2.490e-36	52.88	RRM domain-containing protein (Fragment) n=1 Tax=a...	[more]
B8BXU6_THAPS	8.640e-36	59.00	Uncharacterized protein (Fragment) n=1 Tax=Thalass...	[more]
A0A7S2R154_9STRA	4.790e-35	59.05	Hypothetical protein (Fragment) n=1 Tax=Eucampia a...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 1..63 e-value: 2.5E-15 score: 58.1
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 1..60 e-value: 9.8E-5 score: 22.1
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 1..66 score: 10.326
None	No IPR available	PANTHER	PTHR12603:SF0	CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 4	coord: 1..102
IPR039780	CCR4-NOT transcription complex subunit 4	PANTHER	PTHR12603	CCR4-NOT TRANSCRIPTION COMPLEX RELATED	coord: 1..102
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 1..65

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig749	contig	M-pyrifera_M_contig749:32117..32428 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig749.17704.1	mRNA_M-pyrifera_M_contig749.17704.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig749 32117..32428 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig749.17704.1 ID=prot_M-pyrifera_M_contig749.17704.1|Name=mRNA_M-pyrifera_M_contig749.17704.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=104bp
EYFGQYGEIAKLVINHHQGVSTDDPRYGSASAYITFQRQEDAWAAICSVD
GFRLMGRTIRASFGTSKYCNSFLRNLPCNNPDCLYLHALGDEGDRFTKDE
VQLG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR000504	RRM_dom
IPR039780	Mot2
IPR035979	RBD_domain_sf