prot_M-pyrifera_M_contig7483.17688.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig7483.17688.1
Unique Nameprot_M-pyrifera_M_contig7483.17688.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length519
Homology
BLAST of mRNA_M-pyrifera_M_contig7483.17688.1 vs. uniprot
Match: A0A6H5KLL3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLL3_9PHAE)

HSP 1 Score: 488 bits (1256), Expect = 1.970e-155
Identity = 309/530 (58.30%), Postives = 355/530 (66.98%), Query Frame = 0
Query:    9 RSAEARNTAVLLILVLDQIETVGLADQLETNIVGEALPVAIKCMNQYALAADVGSHRLRVRAGNPDVVLSFGRAVGGGGDXXXXXXXEQPATEEANKPWGCTVLEGLYLDGQGEVQDYWAMALRRS----RQT-LAGLPEMLAGMCEGSSSASSKGLDCGGLVGFLHASEQYQLALPLVGVAVEWQWRLKHVTSPPPXXXXXXXXXXXXXASTAVLTAIARGFLYSAEAVARSGGRGLSSAGSLLDAATGWYIKASQPLRASLFRPDGNASGGVTVAGRGGVGGVGGEVVVKHYEDALAEMERVRDRAKRGGLGGXXXXXXXXXXXXXXXXXXX---------DFGDRGAVNALELARAALATERDLRASVGVSQ------RQARLCQLVFKHASEALSFAEAFDAICDNPVGQQRKENLEALTQHMCESGRLGELCSLALEDCPCSDDDMNASRGCVETPWKAAAVVEDSMWRLALRSRISDLVGGGVGXXXXXXXKRKANYFDCLYAFYVGKGEMVEAARAQDELRER 518
            RSAEARNTAV+L+LVL+Q++ +GLADQLE NIV  ALP+A+KCMNQ+AL+A+VGSH LRVR G   V    G   G GGD        QPA+  A+KPWGCT LEGL+LD  G VQDYWAM+   S    RQ  L G+P +LAGMCEG+  +    LD GGL+ FLHA++QYQLALPLVG+AVEWQWR+K                       AVLT+IARGFLYSAEA ARS G G  S+GSLLD AT WY+K+SQ LRA L R              GG G    E+VVKH+EDAL E+ERVR+  KR     XXXXXXXXXXXXXXXXXXX         DFG RG VNALELARAAL TER+LR S G  Q      R+ARLCQLVFKHASEAL F EAFDA+CDNP+ QQRKENL AL QHMCESGRLGELCSL+L DCP   D            W  + VVE ++W LA RS + DLVGG  G       + + NY+DCLYAFY+ +GE V AARAQDELRER
Sbjct:  484 RSAEARNTAVVLMLVLEQVDRLGLADQLEANIVATALPLALKCMNQHALSAEVGSHHLRVRGGTHPVASRRGGRSGWGGDA-------QPASVAASKPWGCTALEGLFLDSWGVVQDYWAMSTEASARGGRQLGLGGVPSLLAGMCEGTLRSHLTDLDSGGLISFLHANQQYQLALPLVGLAVEWQWRMK------------------VEPHAAVLTSIARGFLYSAEAAARSEGGGSPSSGSLLDRATKWYLKSSQALRAQLLRSS------------GGGGDNQAELVVKHFEDALLEVERVREGLKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDFGGRGPVNALELARAALETERELRGSAGGQQPHQPHQRKARLCQLVFKHASEALCFREAFDAVCDNPIDQQRKENLAALAQHMCESGRLGELCSLSLADCPRGGD------------WHTSRVVERALWPLARRSSVDDLVGGPCGKG-----RSRVNYYDCLYAFYMARGEEVAAARAQDELRER 959          
BLAST of mRNA_M-pyrifera_M_contig7483.17688.1 vs. uniprot
Match: D7FXJ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXJ0_ECTSI)

HSP 1 Score: 489 bits (1260), Expect = 1.830e-153
Identity = 320/528 (60.61%), Postives = 362/528 (68.56%), Query Frame = 0
Query:    9 RSAEARNTAVLLILVLDQIETVGLADQLETNIVGEALPVAIKCMNQYALAADVGSHRLRVRAGNPDVVLSFGRAVGGGGDXXXXXXXEQPATEEANKPWGCTVLEGLYLDGQGEVQDYWAM---ALRRSRQT-LAGLPEMLAGMCEGSSSASSKGLDCGGLVGFLHASEQYQLALPLVGVAVEWQWRLKHVTSPPPXXXXXXXXXXXXXASTAVLTAIARGFLYSAEAVARSGGRGLSSAGSLLDAATGWYIKASQPLRASLFRPDGNASGGVTVAGRGGVGGVGGEVVVKHYEDALAEMERVRDRAKRGGLGGXXXXXXXXXXXXXXXXXXX---------DFGDRGAVNALELARAALATERDLRASVG------VSQRQARLCQLVFKHASEALSFAEAFDAICDNPVGQQRKENLEALTQHMCESGRLGELCSLALEDCPCSDDDMNASRGCVETPWKAAAVVEDSMWRLALRSRISDLVGGGVGXXXXXXXKRKANYFDCLYAFYVGKGEMVEAARAQDELRE 517
            RSAEARNTAV+L+LVL+Q++ +GLADQLE NIV  ALPVA+KCMNQYAL+A+VGSH LRVR G   V    G   G GG         QPA+  A+KPWGCT LEGL+LD +G VQDYWAM   A  R RQ  L G+P +LAGMCEG+  +   GLD GGLV FLHASEQYQLALPLVG+AVEWQWR+K         XXXXXXX      TAVLT+IARGFLYSAEA ARS G G SS+G LLD AT WY+K+SQ LRA L RP G   GG   A          E VV+H+E AL E+ERVR+  +R     XXXXXXXXXXXXXXXXXXX         DFG RG VNALELARAAL TER+LR S G        QRQARLCQLVFKHASEAL F EAFDA+CDNP+ QQRKENL AL QHMCESGRLGELCSL+L DCP                W  + VV+ ++W LA RS + DLVGG  G       + + NY+DCLYAFY+ +GE V AARAQDELRE
Sbjct:  888 RSAEARNTAVVLMLVLEQVDRLGLADQLEANIVATALPVALKCMNQYALSAEVGSHHLRVRGGTHPVASWRGGRSGWGGGGGIGDA--QPASVAASKPWGCTALEGLFLDSRGVVQDYWAMSTEASTRGRQLGLGGVPSLLAGMCEGTLRSHLTGLDSGGLVSFLHASEQYQLALPLVGLAVEWQWRMK-------VGXXXXXXXHRPEPHTAVLTSIARGFLYSAEAAARSEGGGSSSSGPLLDRATKWYLKSSQALRAQLLRPGGG--GGHNQA----------ESVVEHFEGALLEVERVREGLRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDFGGRGPVNALELARAALETERELRGSAGDQXXXXXXQRQARLCQLVFKHASEALCFREAFDAVCDNPIDQQRKENLAALVQHMCESGRLGELCSLSLADCPHGGG------------WHPSGVVDSALWPLARRSSVDDLVGGPGGKG-----RSRVNYYDCLYAFYMARGEEVAAARAQDELRE 1377          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7483.17688.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KLL3_9PHAE1.970e-15558.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXJ0_ECTSI1.830e-15360.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 294..314
NoneNo IPR availableCOILSCoilCoilcoord: 512..518
IPR021717Nucleoporin Nup120/160PANTHERPTHR21286NUCLEAR PORE COMPLEX PROTEIN NUP160coord: 348..511

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7483contigM-pyrifera_M_contig7483:2789..12160 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7483.17688.1mRNA_M-pyrifera_M_contig7483.17688.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig7483 2789..12160 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig7483.17688.1 ID=prot_M-pyrifera_M_contig7483.17688.1|Name=mRNA_M-pyrifera_M_contig7483.17688.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=519bp
MLPCLVFARSAEARNTAVLLILVLDQIETVGLADQLETNIVGEALPVAIK
CMNQYALAADVGSHRLRVRAGNPDVVLSFGRAVGGGGDGGDGGDGEQPAT
EEANKPWGCTVLEGLYLDGQGEVQDYWAMALRRSRQTLAGLPEMLAGMCE
GSSSASSKGLDCGGLVGFLHASEQYQLALPLVGVAVEWQWRLKHVTSPPP
PPPPAPPRPPRPPASTAVLTAIARGFLYSAEAVARSGGRGLSSAGSLLDA
ATGWYIKASQPLRASLFRPDGNASGGVTVAGRGGVGGVGGEVVVKHYEDA
LAEMERVRDRAKRGGLGGGGRGVGGGMAGGGGGGGGGDFGDRGAVNALEL
ARAALATERDLRASVGVSQRQARLCQLVFKHASEALSFAEAFDAICDNPV
GQQRKENLEALTQHMCESGRLGELCSLALEDCPCSDDDMNASRGCVETPW
KAAAVVEDSMWRLALRSRISDLVGGGVGGGGTGGGKRKANYFDCLYAFYV
GKGEMVEAARAQDELRER*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021717Nucleoporin_Nup160