prot_M-pyrifera_M_contig74764.17681.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig74764.17681.1
Unique Nameprot_M-pyrifera_M_contig74764.17681.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length238
Homology
BLAST of mRNA_M-pyrifera_M_contig74764.17681.1 vs. uniprot
Match: A0A5A8DDU8_CAFRO (DNA helicase n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DDU8_CAFRO)

HSP 1 Score: 178 bits (452), Expect = 1.820e-50
Identity = 116/244 (47.54%), Postives = 150/244 (61.48%), Query Frame = 0
Query:    3 LLRAHQKTPGDKIIVFSEALAPLITLADQLGHYVVHGKVPAKEREARISAFRSSDAVNVLFLSRVGDVALDIPDANVIIQISSHFGSRLQEAQRLGRILRIGSDRAAGGGVSGFNAFFYTLISEDTSEMHYSLRRRRYLVDQGYAYKVVGAFD-LQDKRDMRKQSKVLNDDTWD-DPVHGCRARLLQNILGEEG-------GGALEEGEEESEKEGKKGGMEAQRRAVSMAQLSGAAGLRYVEY 237
            LL  H+    DKIIVFS++   L   A  LG  ++HG    KERE  ++AFR   +V VLFLS+VGDVALD+PDANVIIQISSH+GSR+QEAQR+GRILR    + +    SG +AFFYTL+S DT E+ +SLRRRRYLVDQGYAYKV+  F  L  K  ++  +K L  +      +    +  L  I G+E        G    + E E   +       A+ RA SM++LSG +GLRY+EY
Sbjct:  135 LLERHKARADDKIIVFSDSRFALERYATALGELMIHGDTTMKEREVILAAFREDPSVKVLFLSKVGDVALDVPDANVIIQISSHYGSRMQEAQRMGRILR---KKKSSKLASGNHAFFYTLLSTDTEEVAWSLRRRRYLVDQGYAYKVLTTFPGLASKAALQASAKFLQSEAEQRSTLVEVLSSRLATIEGKEAKEAARLSGSTQRQAELEGPHQEWTPNASAKVRA-SMSELSGGSGLRYIEY 374          
BLAST of mRNA_M-pyrifera_M_contig74764.17681.1 vs. uniprot
Match: A0A812RKQ7_9DINO (DNA helicase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812RKQ7_9DINO)

HSP 1 Score: 179 bits (455), Expect = 3.740e-48
Identity = 117/244 (47.95%), Postives = 151/244 (61.89%), Query Frame = 0
Query:    3 LLRAHQKTPGDKIIVFSEALAPLITLADQLGHYVVHGKVPAKEREARISAFRSSDAVNVLFLSRVGDVALDIPDANVIIQISSHFGSRLQEAQRLGRILRIGSDRAAGGGVSGFNAFFYTLISEDTSEMHYSLRRRRYLVDQGYAYKVVGAFD-LQDKRDMRKQSKVLNDDTWD-DPVHGCRARLLQNILGEEG-------GGALEEGEEESEKEGKKGGMEAQRRAVSMAQLSGAAGLRYVEY 237
            LL  H+    DKIIVFS++   L   A  LG  ++HG    KERE  ++AFR   +V VLFLS+VGDVALD+PDANVIIQISSH+GSR+QEAQR+GRILR    + +    SG +AFFYTL+S DT E+ +SLRRRRYLVDQGYAYKV+ AF  L  K  ++  +K L  +      +    +  L  I G+E        G    + E E   +       A+ RA SM++LSG +GLRY+EY
Sbjct:  691 LLERHKARADDKIIVFSDSRFALERYATALGELMIHGDTTMKEREVILAAFREDPSVKVLFLSKVGDVALDVPDANVIIQISSHYGSRMQEAQRMGRILR---KKKSSKLASGNHAFFYTLLSTDTEEVAWSLRRRRYLVDQGYAYKVLTAFPGLGSKAALQASAKFLQSEAEQRSTLVEVLSSRLATIEGKEAKEAARLSGSTQRQAELEGPHQEWTPNASAKVRA-SMSELSGGSGLRYIEY 930          
BLAST of mRNA_M-pyrifera_M_contig74764.17681.1 vs. uniprot
Match: A0A7S0FGE9_9STRA (DNA helicase (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FGE9_9STRA)

HSP 1 Score: 161 bits (408), Expect = 6.960e-46
Identity = 105/233 (45.06%), Postives = 149/233 (63.95%), Query Frame = 0
Query:   12 GDKIIVFSEALAPLITLADQLGHYVVHGKVPAKEREARISAFRSSDAVNVLFLSRVGDVALDIPDANVIIQISSHFGSRLQEAQRLGRILRIGS-DRAAGGGVSGFNAFFYTLISEDTSEMHYSLRRRRYLVDQGYAYKVVGAFDLQDKRDMRKQSKVLNDDTWDDPVHGCRARLLQNILGEEGGGALEEGEEES--EKEGKKGGMEA----QRRAVS-MAQLSGAAGLRYVE 236
            GDK+IVFS+ +  L   AD L   +++G+ P +ER+A +  FRS+DAV  + +S+VGD ++D+P+ANVIIQ+SSHFGSR QEAQRLGRILR  S  +  G   S FNAFFYTL+S DT EM YS +R++YL+DQGY +K+V   +L ++ DM  +   +N+  +  P       LL+ +L  +     E+ +E++   K    G   A    +R A S MAQLSG +G+RY E
Sbjct:    1 GDKVIVFSDLVYSLKMYADMLKRPLIYGETPERERQAILGTFRSTDAVRTICISKVGDTSIDLPEANVIIQVSSHFGSRRQEAQRLGRILRPKSYTQTDGSNRSSFNAFFYTLVSTDTQEMFYSAKRQQYLIDQGYTFKIVT--NLSERADMEAK---INNYIYSTPEKD--RSLLRILLTSDTEMEKEQRQEDTAIRKSNADGAALADAGVKRTAGSTMAQLSGGSGMRYRE 226          
BLAST of mRNA_M-pyrifera_M_contig74764.17681.1 vs. uniprot
Match: B7G0F2_PHATC (DNA helicase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G0F2_PHATC)

HSP 1 Score: 171 bits (432), Expect = 1.800e-45
Identity = 109/242 (45.04%), Postives = 152/242 (62.81%), Query Frame = 0
Query:    3 LLRAHQKTPGDKIIVFSEALAPLITLADQLGHYVVHGKVPAKEREARISAFRSSDAVNVLFLSRVGDVALDIPDANVIIQISSHFGSRLQEAQRLGRILRIGS-DRAAGGGVSGFNAFFYTLISEDTSEMHYSLRRRRYLVDQGYAYKVVGAFDLQDKRDMRKQSKVLNDDTWDDPVHGCRARLLQNILGEEGGGALEEGEEES-----EKEGKKGGMEAQRRAVSMAQLSGAAGLRYVEYS 238
            L+R H+   GDKIIVFS+ +  L   A+ L   +++G+ P +ER+A +  FR+SDAV  + +S+VGD ++D+P+ANVIIQ+SSHFGSR QEAQRLGRILR  S  +  G   S FNAFFYTL+S DT EM YS +R++YL+DQGY +K+V   +L +K D      + N  T+  P      +LL+ +L  E     E+  E++       +G      A ++  SMAQLSG  GLRY E+S
Sbjct:  470 LVRFHEAR-GDKIIVFSDLVYSLKLYAEMLKKPLIYGETPERERQAILGTFRASDAVRTICISKVGDTSIDLPEANVIIQVSSHFGSRRQEAQRLGRILRPKSYTQQDGSNRSTFNAFFYTLVSSDTQEMFYSAKRQQYLIDQGYTFKIVT--NLCEKADAEA---IANGCTFATPEDD--RKLLRTVLTSETDLEKEQRAEDTAIRKNNTDGAALADAASKKTTSMAQLSGGTGLRYKEFS 703          
BLAST of mRNA_M-pyrifera_M_contig74764.17681.1 vs. uniprot
Match: A0A7S0WRF2_9CHLO (DNA helicase n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0WRF2_9CHLO)

HSP 1 Score: 167 bits (424), Expect = 4.990e-45
Identity = 103/235 (43.83%), Postives = 149/235 (63.40%), Query Frame = 0
Query:    3 LLRAHQKTPGDKIIVFSEALAPLITLADQLGHYVVHGKVPAKEREARISAFRSSDAVNVLFLSRVGDVALDIPDANVIIQISSHFGSRLQEAQRLGRILRIGSDRAAGGGVSGFNAFFYTLISEDTSEMHYSLRRRRYLVDQGYAYKVVGAFDLQDKRDMRKQSKVLNDDTWDDPVHGCRARLLQNILGEEGGGALEEGEEESEKEGKKGGMEAQRRAVSMAQLSGAAGLRYVEY 237
            L+  H++   DK+IVFS+ +  L   A +LG   ++G     ER   + AF++   VN +FLS+VGD +LDIP+ANV+IQISSH GSR QEAQRLGRILR    ++ G  V+ +NAFFYTL+S+DT EM+YS +R+++L+DQGYA+KVV       +  M  Q ++   ++  D +     R+L   L E G  AL + ++  E E  K    A+R  V++ +L+GAAG RY+EY
Sbjct:  289 LIAWHERERKDKVIVFSDNIWALREYATRLGKPFIYGPTSHAERTRVLHAFKNDPNVNTVFLSKVGDNSLDIPEANVLIQISSHAGSRRQEAQRLGRILRAKRAKSIGAQVNEYNAFFYTLVSQDTQEMYYSTKRQQFLIDQGYAFKVVTNLVETAQEAMAGQLQLATKESQLDLL----CRVLTAGLEEAGTEALRD-DDGDEMEAAKKRPGAKRSVVNVRELTGAAGARYIEY 518          
BLAST of mRNA_M-pyrifera_M_contig74764.17681.1 vs. uniprot
Match: A0A7S1ZYY8_TRICV (DNA helicase (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZYY8_TRICV)

HSP 1 Score: 155 bits (392), Expect = 9.590e-44
Identity = 77/141 (54.61%), Postives = 105/141 (74.47%), Query Frame = 0
Query:   12 GDKIIVFSEALAPLITLADQLGHYVVHGKVPAKEREARISAFRSSDAVNVLFLSRVGDVALDIPDANVIIQISSHFGSRLQEAQRLGRILRIGS-DRAAGGGVSGFNAFFYTLISEDTSEMHYSLRRRRYLVDQGYAYKVV 151
            GDKIIVFS+ +  L   AD L   +++G+ P +ER+A +  FR++DA+  + +S+VGD ++D+P+AN++IQ SSHFGSR QEAQRLGRILR  S  +  G   S FNAFFYTL+S DT EM YS RR++YL+DQGY +K+V
Sbjct:    4 GDKIIVFSDLVYSLKMYADMLKRPLIYGETPERERQAILGTFRATDALRTICISKVGDTSIDLPEANIVIQASSHFGSRRQEAQRLGRILRPKSYTQTDGSNRSSFNAFFYTLVSTDTQEMFYSARRQQYLIDQGYTFKIV 144          
BLAST of mRNA_M-pyrifera_M_contig74764.17681.1 vs. uniprot
Match: A0A250WWA4_9CHLO (DNA helicase n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WWA4_9CHLO)

HSP 1 Score: 165 bits (417), Expect = 4.970e-43
Identity = 108/250 (43.20%), Postives = 145/250 (58.00%), Query Frame = 0
Query:    3 LLRAHQKTPGDKIIVFSEALAPLITLADQLGHYVVHGKVPAKEREARISAFRSSDAVNVLFLSRVGDVALDIPDANVIIQISSHFGSRLQEAQRLGRILRIGSDRAAGGGVSGFNAFFYTLISEDTSEMHYSLRRRRYLVDQGYAYKVV--------------GAFDLQDKRDMRKQSKVLNDDTWDDPVHGCRARLLQNILGEEGGGALEEGEEESEKEGKKGGMEAQRRAVSMAQLSGAAGLRYVEYS 238
            L+  H+   GDK+IVFS+ +  L   A  LG   ++G     ER   + AF+    VN +FLS+VGD +LDIP+ANV+IQISSH GSR QEAQRLGRILR    +A  G    FNAFFYTL+S DT EM+YS +R+++L+DQGY++KV+              G F  Q K+ +   S+VL        V G     ++ +LG++ G  L           K GG   +R A SMA LSGA+G+ Y+EYS
Sbjct:  666 LINFHEGQRGDKVIVFSDNIWALREYATLLGKPFIYGPTGHAERTRVLHAFKHDPNVNTVFLSKVGDNSLDIPEANVLIQISSHAGSRRQEAQRLGRILRAKQGKAGSGQEGEFNAFFYTLVSRDTQEMYYSTKRQQFLIDQGYSFKVITNLLEAAEESQLAQGHFTTQ-KQQLDLLSRVL--------VAGLEEAGVE-VLGDKDGDTLAAV--------KAGGARRRRDAGSMAALSGASGMSYLEYS 897          
BLAST of mRNA_M-pyrifera_M_contig74764.17681.1 vs. uniprot
Match: A0A812WA80_SYMMI (DNA helicase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WA80_SYMMI)

HSP 1 Score: 156 bits (394), Expect = 1.070e-42
Identity = 81/151 (53.64%), Postives = 110/151 (72.85%), Query Frame = 0
Query:    1 EALLRAHQKTPGDKIIVFSEALAPLITLADQLGHYVVHGKVPAKEREARISAFRSSDAVNVLFLSRVGDVALDIPDANVIIQISSHFGSRLQEAQRLGRILRIGSDRAAGGGVSGFNAFFYTLISEDTSEMHYSLRRRRYLVDQGYAYKVV 151
            E L++ H+   GDKII+FS+ +  L    ++L    ++G     ER   ++ F++   VNV+ LS+VGD ALDIP+ANVIIQ+SSHFG+R QEAQRLGRILR  + + AG  V+GFNAFFYTL+S DT EM++S +R++YLVDQGY +KVV
Sbjct:   84 EYLVKVHEAR-GDKIIIFSDDIVALTIYCEKLHCPYIYGATSEDERRVWLNGFKNRRDVNVIGLSKVGDTALDIPEANVIIQVSSHFGARRQEAQRLGRILRPKASQLAGHVVTGFNAFFYTLVSTDTREMYFSTKRQQYLVDQGYTFKVV 233          
BLAST of mRNA_M-pyrifera_M_contig74764.17681.1 vs. uniprot
Match: A0A448Z8T1_9STRA (DNA helicase n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448Z8T1_9STRA)

HSP 1 Score: 163 bits (412), Expect = 1.580e-42
Identity = 100/244 (40.98%), Postives = 153/244 (62.70%), Query Frame = 0
Query:    1 EALLRAHQKTPGDKIIVFSEALAPLITLADQLGHYVVHGKVPAKEREARISAFRSSDAVNVLFLSRVGDVALDIPDANVIIQISSHFGSRLQEAQRLGRILRIGS-DRAAGGGVSGFNAFFYTLISEDTSEMHYSLRRRRYLVDQGYAYKVVGAFDLQDKRDMRKQSKVLNDDTWDDPVHGCRARLLQNILGEEGGGALEEGEEES--EKEGKKGGMEAQRRA-----VSMAQLSGAAGLRYVE 236
            E L+R H++  GDKIIVFS+ +  L   A+ L   +++G+ P +ER+A +  FR++DA+  + +S+VGD ++D+P+ANVI+Q+SSHFGSR QEAQRLGRILR  S  +  G   S FNAFFYTL+S DT EM YS +R++YL+DQGY +K+V   +L +K     ++ +  D+++          +L+ ++  E     E+  E++   K    G   A  R      +SM+Q+SG +G+RY E
Sbjct:  526 EFLVRFHEQR-GDKIIVFSDLVYSLKLYAEMLKKPLIYGETPERERQAILGTFRATDALRTICISKVGDTSIDLPEANVIVQVSSHFGSRRQEAQRLGRILRPKSYTQTDGSNKSSFNAFFYTLVSSDTQEMFYSAKRQQYLIDQGYTFKIVT--NLCEKAAEDAKNLIGTDNSYAFSTAADDRDMLRKVMNSETDLDKEQRAEDAAIRKSNPDGAHMADARTKRTGGMSMSQVSGGSGMRYKE 766          
BLAST of mRNA_M-pyrifera_M_contig74764.17681.1 vs. uniprot
Match: A0A7S2P0V4_9STRA (DNA helicase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P0V4_9STRA)

HSP 1 Score: 157 bits (396), Expect = 1.880e-42
Identity = 84/163 (51.53%), Postives = 116/163 (71.17%), Query Frame = 0
Query:    1 EALLRAHQKTPGDKIIVFSEALAPLITLADQLGHYVVHGKVPAKEREARISAFRSSDAVNVLFLSRVGDVALDIPDANVIIQISSHFGSRLQEAQRLGRILRIGS-DRAAGGGVSGFNAFFYTLISEDTSEMHYSLRRRRYLVDQGYAYKVVGAFDLQDKRDM 162
            E L+R H++  GDKIIVFS+ +  L   A  L   +++G+   +ER+A +  FR+SDA+  + +S+VGD ++D+P+ANVIIQ+SSHFGSR QEAQRLGRILR  S  +  G   S FNAFFYTL+S DT EM YS +R++YL+DQGY +K+V    L +K D+
Sbjct:  126 EFLMRFHEER-GDKIIVFSDLVYSLKLYAAMLKRPMIYGETSERERQAILGTFRTSDALRTICISKVGDTSIDLPEANVIIQVSSHFGSRRQEAQRLGRILRPKSYTQTDGSNRSSFNAFFYTLVSTDTQEMFYSTKRQQYLIDQGYTFKIVTT--LSEKADL 285          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig74764.17681.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8DDU8_CAFRO1.820e-5047.54DNA helicase n=3 Tax=Cafeteria roenbergensis TaxID... [more]
A0A812RKQ7_9DINO3.740e-4847.95DNA helicase n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]
A0A7S0FGE9_9STRA6.960e-4645.06DNA helicase (Fragment) n=1 Tax=Minutocellus polym... [more]
B7G0F2_PHATC1.800e-4545.04DNA helicase n=2 Tax=Phaeodactylum tricornutum Tax... [more]
A0A7S0WRF2_9CHLO4.990e-4543.83DNA helicase n=1 Tax=Chlamydomonas leiostraca TaxI... [more]
A0A7S1ZYY8_TRICV9.590e-4454.61DNA helicase (Fragment) n=1 Tax=Trieres chinensis ... [more]
A0A250WWA4_9CHLO4.970e-4343.20DNA helicase n=1 Tax=Chlamydomonas eustigma TaxID=... [more]
A0A812WA80_SYMMI1.070e-4253.64DNA helicase n=1 Tax=Symbiodinium microadriaticum ... [more]
A0A448Z8T1_9STRA1.580e-4240.98DNA helicase n=2 Tax=Pseudo-nitzschia TaxID=41953 ... [more]
A0A7S2P0V4_9STRA1.880e-4251.53DNA helicase n=1 Tax=Skeletonema marinoi TaxID=267... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00851XRODRMPGMNTBcoord: 218..237
score: 41.88
coord: 13..35
score: 42.93
coord: 79..104
score: 78.85
coord: 60..78
score: 52.63
coord: 114..137
score: 60.42
NoneNo IPR availableGENE3D3.40.50.300coord: 1..178
e-value: 7.9E-43
score: 148.4
NoneNo IPR availablePANTHERPTHR11274:SF0GENERAL TRANSCRIPTION AND DNA REPAIR FACTOR IIH HELICASE SUBUNIT XPBcoord: 2..233
NoneNo IPR availablePANTHERPTHR11274RAD25/XP-B DNA REPAIR HELICASEcoord: 2..233
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 20..104
e-value: 2.9E-11
score: 53.4
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 1..162
score: 12.695
IPR032438ERCC3/RAD25/XPB helicase, C-terminal domainPFAMPF16203ERCC3_RAD25_Ccoord: 3..196
e-value: 9.5E-60
score: 201.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig74764contigM-pyrifera_M_contig74764:1..714 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig74764.17681.1mRNA_M-pyrifera_M_contig74764.17681.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig74764 1..714 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig74764.17681.1 ID=prot_M-pyrifera_M_contig74764.17681.1|Name=mRNA_M-pyrifera_M_contig74764.17681.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=238bp
EALLRAHQKTPGDKIIVFSEALAPLITLADQLGHYVVHGKVPAKEREARI
SAFRSSDAVNVLFLSRVGDVALDIPDANVIIQISSHFGSRLQEAQRLGRI
LRIGSDRAAGGGVSGFNAFFYTLISEDTSEMHYSLRRRRYLVDQGYAYKV
VGAFDLQDKRDMRKQSKVLNDDTWDDPVHGCRARLLQNILGEEGGGALEE
GEEESEKEGKKGGMEAQRRAVSMAQLSGAAGLRYVEYS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR032438ERCC3_RAD25_C
IPR027417P-loop_NTPase