mRNA_M-pyrifera_M_contig74757.17678.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig74757.17678.1 vs. uniprot
Match: W7UC88_9STRA (Iron-sulfur cluster assembly 2 mitochondrial-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UC88_9STRA) HSP 1 Score: 108 bits (271), Expect = 1.860e-27 Identity = 58/125 (46.40%), Postives = 85/125 (68.00%), Query Frame = 1 Query: 1 GRFRRDWWGGSVEGRRLSTNAPESS---SMFPDIIVSSRATKRLKELNAD-GEEEVRLRVAVEAGGCSGFQYTFDLITDPPKDDDLVVGEEGAQVVVDEVTLDLIRHSTIDFSTEMIRAGFEVVN 363 G +RR W + R+LS+NA +S S+ D++V++ KR+K L G+E ++LR++VE GGCSGF YTF + P +DDD V G EGAQVVVDE +L+ +R ST+DF+ +M+R+ F VV+ Sbjct: 43 GIYRRSWSIYRHDFRQLSSNAVSNSPQMSLDEDVVVTNACIKRIKALQVKTGKENLKLRLSVEGGGCSGFTYTFTMEDGPVEDDDKVYGREGAQVVVDEGSLEFVRGSTVDFTEDMMRSAFAVVS 167
BLAST of mRNA_M-pyrifera_M_contig74757.17678.1 vs. uniprot
Match: A0A4D9DG01_9STRA (Fe-S_biosyn domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DG01_9STRA) HSP 1 Score: 100 bits (248), Expect = 8.640e-25 Identity = 48/97 (49.48%), Postives = 70/97 (72.16%), Query Frame = 1 Query: 76 SMFPDIIVSSRATKRLKELNAD-GEEEVRLRVAVEAGGCSGFQYTFDLITDPPKDDDLVVGEEGAQVVVDEVTLDLIRHSTIDFSTEMIRAGFEVVN 363 S+ D++V++ KR+K L G+E ++LR++VE GGCSGF YTF + P +DDD V G EGAQVVVDE +L+ +R ST+DF+ +M+R+ F VV+ Sbjct: 2 SLDEDVVVTNACIKRIKALQVKTGKENLKLRLSVEGGGCSGFTYTFTMEDGPVEDDDKVYGREGAQVVVDEGSLEFVRGSTVDFTEDMMRSAFAVVS 98
BLAST of mRNA_M-pyrifera_M_contig74757.17678.1 vs. uniprot
Match: UPI000C76FF62 (iron-sulfur cluster assembly 2 homolog, mitochondrial-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C76FF62) HSP 1 Score: 98.2 bits (243), Expect = 9.510e-24 Identity = 51/114 (44.74%), Postives = 76/114 (66.67%), Query Frame = 1 Query: 25 GGSVEGRRLSTNAPESSSMFPDIIVSSRATKRLKELNADGEEEVRLRVAVEAGGCSGFQYTFDLITDP-PKDDDLVVGEEGAQVVVDEVTLDLIRHSTIDFSTEMIRAGFEVVN 363 G S + RLS+ A E+S +++S A KRLKEL G LR+ VE GGCSGFQY FDL+ D P +D+ ++ ++GA+V++DE +L+ ++ ST+D+ E+IRA F +VN Sbjct: 18 GKSAKICRLSSTAVETSEPDHGLLLSESAVKRLKEL---GGGNSCLRITVEGGGCSGFQYKFDLVEDAVPAEDERIIDKDGAKVLIDETSLEYLKGSTVDYHRELIRAAFRIVN 128
BLAST of mRNA_M-pyrifera_M_contig74757.17678.1 vs. uniprot
Match: A0A024TH77_9STRA (Fe-S_biosyn domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TH77_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 7.240e-23 Identity = 44/97 (45.36%), Postives = 64/97 (65.98%), Query Frame = 1 Query: 73 SSMFPDIIVSSRATKRLKELNADGEEEVRLRVAVEAGGCSGFQYTFDLITDPPKDDDLVVGEEGAQVVVDEVTLDLIRHSTIDFSTEMIRAGFEVVN 363 S PD+I++ + +L LN + + LRVAVE GGCSGFQY L P DDD V ++GA++VVD ++DL++ ST+DF+ E+IR+ F V+N Sbjct: 19 SDFLPDLIITKSTSTQLNALNRNSPTKKHLRVAVEGGGCSGFQYVITLEDAPLDDDDRVFEKDGARIVVDSTSMDLLKGSTVDFAQELIRSSFTVIN 115
BLAST of mRNA_M-pyrifera_M_contig74757.17678.1 vs. uniprot
Match: A0A1B6EEJ5_9HEMI (Fe-S_biosyn domain-containing protein (Fragment) n=1 Tax=Clastoptera arizonana TaxID=38151 RepID=A0A1B6EEJ5_9HEMI) HSP 1 Score: 95.5 bits (236), Expect = 8.990e-23 Identity = 47/107 (43.93%), Postives = 68/107 (63.55%), Query Frame = 1 Query: 43 RRLSTNAPESSSMFPDIIVSSRATKRLKELNADGEEEVRLRVAVEAGGCSGFQYTFDLITDPPKDDDLVVGEEGAQVVVDEVTLDLIRHSTIDFSTEMIRAGFEVVN 363 R LST P DI++S KRL +++ DG LR+ VE GGCSGFQY FDL +DD + ++GA+V+VD ++LDLI+ ST+DF E+I++ F ++N Sbjct: 20 RSLSTAVPNLDDAVEDIVLSDACVKRLNQISKDGSA---LRIIVEGGGCSGFQYKFDL-DKIVSEDDKIFEKDGAKVIVDNISLDLIKGSTVDFHQELIKSSFRIIN 122
BLAST of mRNA_M-pyrifera_M_contig74757.17678.1 vs. uniprot
Match: UPI000E6D982E (iron-sulfur assembly protein IscA-like 2, mitochondrial n=1 Tax=Hyposmocoma kahamanoa TaxID=1477025 RepID=UPI000E6D982E) HSP 1 Score: 94.4 bits (233), Expect = 2.690e-22 Identity = 49/103 (47.57%), Postives = 70/103 (67.96%), Query Frame = 1 Query: 52 STNAPESSSMFPDIIVSSRATKRLKELNADGEEEVRLRVAVEAGGCSGFQYTFDLITDPPKDDDLVVGEEGAQVVVDEVTLDLIRHSTIDFSTEMIRAGFEVV 360 +T PE+SS I++S +RLK+L A+ LR+ VE+GGCSGFQY FD + + DDD + ++G +VV+DE +L+LI+ STIDF TE+IR+ F VV Sbjct: 24 ATQKPETSSSHDGIVLSDSCVQRLKQLCANSN--TFLRLCVESGGCSGFQYKFD-VDEKLSDDDRIFEKDGVKVVIDETSLELIKGSTIDFHTELIRSAFRVV 123
BLAST of mRNA_M-pyrifera_M_contig74757.17678.1 vs. uniprot
Match: W4G9P9_9STRA (Fe-S_biosyn domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G9P9_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 2.990e-22 Identity = 44/97 (45.36%), Postives = 63/97 (64.95%), Query Frame = 1 Query: 73 SSMFPDIIVSSRATKRLKELNADGEEEVRLRVAVEAGGCSGFQYTFDLITDPPKDDDLVVGEEGAQVVVDEVTLDLIRHSTIDFSTEMIRAGFEVVN 363 S PD+I++ + +L LN + LRVAVE GGCSGFQY L P ++DD V ++GA VVVD ++DL++ ST+DF+ E+IR+ F V+N Sbjct: 20 SDFLPDLIITKATSNQLNALNRTAATKQHLRVAVEGGGCSGFQYVITLEDTPLEEDDRVFEKDGAAVVVDPTSMDLLKGSTVDFAQELIRSSFTVIN 116
BLAST of mRNA_M-pyrifera_M_contig74757.17678.1 vs. uniprot
Match: A0A485L7K0_9STRA (Aste57867_16949 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L7K0_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 3.820e-22 Identity = 48/112 (42.86%), Postives = 70/112 (62.50%), Query Frame = 1 Query: 73 SSMFPDIIVSSRATKRLKELNADGEEEVRLRVAVEAGGCSGFQYTFDLITDP---------------PKDDDLVVGEEGAQVVVDEVTLDLIRHSTIDFSTEMIRAGFEVVN 363 S PD+I+++ ATK+L LN + E + LRVAVE GGCSGFQY L P +D+D V ++GAQVVVDE +++L++ ST+DF+ E+IR+ F ++N Sbjct: 41 SDFLPDLIITNAATKQLNALNRNAENKQYLRVAVEGGGCSGFQYVVTLEDAPIGKMTMHVNFTYPGVAEDEDRVFEKDGAQVVVDETSMELLKGSTVDFAQELIRSSFTIIN 152
BLAST of mRNA_M-pyrifera_M_contig74757.17678.1 vs. uniprot
Match: UPI0018A763F0 (iron-sulfur cluster assembly 2 homolog, mitochondrial-like n=1 Tax=Penaeus monodon TaxID=6687 RepID=UPI0018A763F0) HSP 1 Score: 94.7 bits (234), Expect = 5.120e-22 Identity = 47/103 (45.63%), Postives = 69/103 (66.99%), Query Frame = 1 Query: 55 TNAPESSSMFPDIIVSSRATKRLKELNADGEEEVRLRVAVEAGGCSGFQYTFDLITDPPKDDDLVVGEEGAQVVVDEVTLDLIRHSTIDFSTEMIRAGFEVVN 363 T + E + D+++S RLKE+ D ++ LRV VE GGCSGFQY FD+ T+ ++DD V +GA+VV+DE +LD +R STID+ TE+IRA F +++ Sbjct: 63 TASSEKAEPSSDLLLSDSCVARLKEILGDEDKTSFLRVIVEGGGCSGFQYKFDIDTEV-QEDDRVFERDGAKVVIDETSLDFVRGSTIDYHTELIRAAFRILD 164
BLAST of mRNA_M-pyrifera_M_contig74757.17678.1 vs. uniprot
Match: UPI001F4F9DFC (iron-sulfur cluster assembly 2 homolog, mitochondrial n=2 Tax=Schistocerca TaxID=7008 RepID=UPI001F4F9DFC) HSP 1 Score: 93.6 bits (231), Expect = 5.830e-22 Identity = 48/98 (48.98%), Postives = 69/98 (70.41%), Query Frame = 1 Query: 70 SSSMFPDIIVSSRATKRLKELNADGEEEVRLRVAVEAGGCSGFQYTFDLITDPPKDDDLVVGEEGAQVVVDEVTLDLIRHSTIDFSTEMIRAGFEVVN 363 SS+ + VS+ TKRLKE+++DG LR+ VE GGCSGFQY FDL + DDD+V+ ++G +VV+DE +L+ IR STI+F E+IR+ F +V+ Sbjct: 34 SSAAGQPLNVSTSCTKRLKEISSDGSN---LRITVEGGGCSGFQYKFDL-DENINDDDVVIEKDGVKVVIDETSLEYIRGSTIEFHEELIRSAFRIVD 127 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig74757.17678.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig74757.17678.1 >prot_M-pyrifera_M_contig74757.17678.1 ID=prot_M-pyrifera_M_contig74757.17678.1|Name=mRNA_M-pyrifera_M_contig74757.17678.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=121bp GRFRRDWWGGSVEGRRLSTNAPESSSMFPDIIVSSRATKRLKELNADGEEback to top mRNA from alignment at M-pyrifera_M_contig74757:1..437- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig74757.17678.1 ID=mRNA_M-pyrifera_M_contig74757.17678.1|Name=mRNA_M-pyrifera_M_contig74757.17678.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=437bp|location=Sequence derived from alignment at M-pyrifera_M_contig74757:1..437- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig74757:1..437- >mRNA_M-pyrifera_M_contig74757.17678.1 ID=mRNA_M-pyrifera_M_contig74757.17678.1|Name=mRNA_M-pyrifera_M_contig74757.17678.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=726bp|location=Sequence derived from alignment at M-pyrifera_M_contig74757:1..437- (Macrocystis pyrifera P11B4 male)back to top |