prot_M-pyrifera_M_contig746.17648.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig746.17648.1
Unique Nameprot_M-pyrifera_M_contig746.17648.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length93
Homology
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BLAST of mRNA_M-pyrifera_M_contig746.17648.1 vs. uniprot
Match: D7G417_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G417_ECTSI)

HSP 1 Score: 169 bits (429), Expect = 5.650e-53
Identity = 73/89 (82.02%), Postives = 82/89 (92.13%), Query Frame = 0 
Query:    1 AVVGQPQSAEAAPLVAPPGAPTVGMWVEDRYCGLTTWVVSLVSGVVCAYFCPCDRRTVWISEGVKYNEKGATVDDYLFLNPCPRGSICN 89
            AV+GQPQSAEAAPLVAPPGAPTVGMWVE+RYCGLTTW+++LV G+ C+YFCPCDRRTVW+S GVKYNEKGA  DDYLFLNPCP GS C+
Sbjct:   18 AVIGQPQSAEAAPLVAPPGAPTVGMWVEERYCGLTTWLITLVGGLPCSYFCPCDRRTVWVSGGVKYNEKGAVTDDYLFLNPCPPGSTCH 106
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BLAST of mRNA_M-pyrifera_M_contig746.17648.1 vs. uniprot
Match: D8LMJ4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMJ4_ECTSI)

HSP 1 Score: 131 bits (330), Expect = 7.160e-38
Identity = 58/83 (69.88%), Postives = 70/83 (84.34%), Query Frame = 0 
Query:    1 AVVGQP--QSAEAAPLVAPPGAPTVGMWVEDRYCGLTTWVVSLVSGVVCAYFCPCDRRTVWISEGVKYNEKGATVDDYLFLNP 81
            AV GQP  Q+AEAAP++A PGAPT GMWVE+RYCGLTTW++++V    C+YFCPCDRRTVW++ G KYNEKGA VDD LF+NP
Sbjct:   26 AVTGQPVPQAAEAAPVMAAPGAPTTGMWVEERYCGLTTWLITVVGSFPCSYFCPCDRRTVWVAGGKKYNEKGAIVDDQLFVNP 108
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig746.17648.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G417_ECTSI5.650e-5382.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LMJ4_ECTSI7.160e-3869.88Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 52..92
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 34..51
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..33

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig746contigM-pyrifera_M_contig746:1845..5390 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig746.17648.1mRNA_M-pyrifera_M_contig746.17648.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig746 1845..5390 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig746.17648.1 ID=prot_M-pyrifera_M_contig746.17648.1|Name=mRNA_M-pyrifera_M_contig746.17648.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=93bp
AVVGQPQSAEAAPLVAPPGAPTVGMWVEDRYCGLTTWVVSLVSGVVCAYF
CPCDRRTVWISEGVKYNEKGATVDDYLFLNPCPRGSICNNCH*
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