prot_M-pyrifera_M_contig74460.17625.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig74460.17625.1
Unique Name	prot_M-pyrifera_M_contig74460.17625.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	99

Homology

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BLAST of mRNA_M-pyrifera_M_contig74460.17625.1 vs. uniprot
Match: A0A7S1CFX5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CFX5_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 4.390e-12
Identity = 34/97 (35.05%), Postives = 58/97 (59.79%), Query Frame = 0

Query:    4 SCDGIILGDYVARSIVMLATVVGINVSISLIRAE-YNNPWGAARRARIEQEGRGLDALYTRLQSLHCFRAAYVGFLLIPTFVLILQVSLLSWRADWV 99
            +C  + L +YV RS++ML  ++ +N +I+ +RA  +++PW  +           L A Y RL   H FR  ++ +LL+PT +LI Q+++LSW  +WV
Sbjct:  306 ACGALQLAEYVLRSLLMLGIIIAMNFNITHVRATIHDSPWAPS-----------LPAAYKRLNQFHSFRWTFLAYLLLPTLILIFQITILSWSFEWV 391

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BLAST of mRNA_M-pyrifera_M_contig74460.17625.1 vs. uniprot
Match: A0A7S3XKD3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKD3_HETAK)

HSP 1 Score: 61.2 bits (147), Expect = 3.140e-9
Identity = 34/95 (35.79%), Postives = 53/95 (55.79%), Query Frame = 0

Query:    5 CDGIILGDYVARSIVMLATVVGINVSISLIRAEY-NNPWGAARRARIEQEGRGLDALYTRLQSLHCFRAAYVGFLLIPTFVLILQVSLLSWRADW 98
            C   +L +YVARS++ML  +V  N +I  +R    ++PW A           GL   Y  L     FR A++ +LL+PT +L++Q++LL+W  DW
Sbjct:   91 CRAFLLAEYVARSMLMLFIIVAANFNIHHLRLGLASSPWSA-----------GLALTYRHLADYTRFRWAFIAYLLLPTALLVVQMTLLTWEYDW 174

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BLAST of mRNA_M-pyrifera_M_contig74460.17625.1 vs. uniprot
Match: A0A7S2SFR7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SFR7_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 1.270e-6
Identity = 34/100 (34.00%), Postives = 55/100 (55.00%), Query Frame = 0

Query:    4 SCDGIILGDYVARSIVMLATVVGINVSISLIR---AEYNNPWGAARRARIEQEGRGLDALYTRLQSLHCFRAAYVGFLLIPTFVLILQVS-LLSWRADWV 99
            +C G+ LG+Y+ RS+V+LA +V +N +I+ +R   AE   P       +           Y ++     FR A++ +LL PT +LIL+ + LLSW  +WV
Sbjct:   91 NCQGLTLGEYILRSLVLLAIIVAMNFNITQLRQMLAEVPPPITPHMAVQ-----------YAKVHIFQMFRWAFLAYLLAPTTLLILEAAVLLSWEYEWV 179

[Close]

BLAST of mRNA_M-pyrifera_M_contig74460.17625.1 vs. uniprot
Match: A0A7S2SFN9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SFN9_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 2.230e-6
Identity = 34/100 (34.00%), Postives = 55/100 (55.00%), Query Frame = 0

Query:    4 SCDGIILGDYVARSIVMLATVVGINVSISLIR---AEYNNPWGAARRARIEQEGRGLDALYTRLQSLHCFRAAYVGFLLIPTFVLILQVS-LLSWRADWV 99
            +C G+ LG+Y+ RS+V+LA +V +N +I+ +R   AE   P       +           Y ++     FR A++ +LL PT +LIL+ + LLSW  +WV
Sbjct:  373 NCQGLTLGEYILRSLVLLAIIVAMNFNITQLRQMLAEVPPPITPHMAVQ-----------YAKVHIFQMFRWAFLAYLLAPTTLLILEAAVLLSWEYEWV 461

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig74460.17625.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig74460.17625.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
A0A7S1CFX5_9STRA	4.390e-12	35.05	Hypothetical protein (Fragment) n=1 Tax=Bicosoecid...	[more]
A0A7S3XKD3_HETAK	3.140e-9	35.79	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
A0A7S2SFR7_9STRA	1.270e-6	34.00	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A7S2SFN9_9STRA	2.230e-6	34.00	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 72..94
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 13..34
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 35..71
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 95..99
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..12
None	No IPR available	TMHMM	TMhelix		coord: 72..94
None	No IPR available	TMHMM	TMhelix		coord: 13..35

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig74460	contig	M-pyrifera_M_contig74460:1..297 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig74460.17625.1	mRNA_M-pyrifera_M_contig74460.17625.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig74460 1..297 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig74460.17625.1 ID=prot_M-pyrifera_M_contig74460.17625.1|Name=mRNA_M-pyrifera_M_contig74460.17625.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=99bp
GITSCDGIILGDYVARSIVMLATVVGINVSISLIRAEYNNPWGAARRARI
EQEGRGLDALYTRLQSLHCFRAAYVGFLLIPTFVLILQVSLLSWRADWV