prot_M-pyrifera_M_contig74335.17607.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig74335.17607.1
Unique Nameprot_M-pyrifera_M_contig74335.17607.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length132
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig74335.17607.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 2..132
e-value: 4.6E-21
score: 76.5
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 84..104
e-value: 0.37
score: 11.0
coord: 7..26
e-value: 0.093
score: 12.8
NoneNo IPR availablePANTHERPTHR24113FAMILY NOT NAMEDcoord: 6..64
coord: 76..132
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..21
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 22..41
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 42..132
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 6..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig74335contigM-pyrifera_M_contig74335:6..401 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig74335.17607.1mRNA_M-pyrifera_M_contig74335.17607.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig74335 6..401 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig74335.17607.1 ID=prot_M-pyrifera_M_contig74335.17607.1|Name=mRNA_M-pyrifera_M_contig74335.17607.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=132bp
MGGAWKSLRALSLSHCDLSNDALLSLIPCFAACTSLHLLYLSRNFFDPET
VAQLVSESVRVVDLNFNELESSEIQASMPVGLKSLQSIHLMGNSITCDGV
TAISRILPTHFPLIREISFCRNNVSNRGVEAL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt