prot_M-pyrifera_M_contig74231.17582.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig74231.17582.1
Unique Nameprot_M-pyrifera_M_contig74231.17582.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length42
Homology
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BLAST of mRNA_M-pyrifera_M_contig74231.17582.1 vs. uniprot
Match: D7FJY9_ECTSI (Palmitoyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJY9_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 4.350e-10
Identity = 28/39 (71.79%), Postives = 34/39 (87.18%), Query Frame = 0 
Query:    4 VLLAFIFCAVSYLLGWHGYLVAGNVTTIEYFKVRRCERN 42
            ++L F+FC+VSYLL WHGYLVAGNVTTIEYFK +R  R+
Sbjct:  216 LVLGFVFCSVSYLLIWHGYLVAGNVTTIEYFKWKRSMRD 254
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig74231.17582.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FJY9_ECTSI4.350e-1071.79Palmitoyltransferase n=2 Tax=Ectocarpus TaxID=2879... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..42
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableTMHMMTMhelixcoord: 4..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig74231contigM-pyrifera_M_contig74231:268..393 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig74231.17582.1mRNA_M-pyrifera_M_contig74231.17582.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig74231 268..393 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig74231.17582.1 ID=prot_M-pyrifera_M_contig74231.17582.1|Name=mRNA_M-pyrifera_M_contig74231.17582.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=42bp
MRRVLLAFIFCAVSYLLGWHGYLVAGNVTTIEYFKVRRCERN
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