prot_M-pyrifera_M_contig73937.17517.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig73937.17517.1
Unique Nameprot_M-pyrifera_M_contig73937.17517.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length152
Homology
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BLAST of mRNA_M-pyrifera_M_contig73937.17517.1 vs. uniprot
Match: A0A2K3DK03_CHLRE (Uncharacterized protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3DK03_CHLRE)

HSP 1 Score: 53.1 bits (126), Expect = 3.200e-5
Identity = 50/155 (32.26%), Postives = 76/155 (49.03%), Query Frame = 0 
Query:    1 MNKLCAENLHLGGAVCVAQAWLEG-VCGLRMATEAVELMVSQCL------LDPRPLSLPGTVSSLFLRFLTLVATFPWASKVLFVDPAASARATDREEAQAAFDRMRERAREGEAAPPPPIFLVTPSQRND--WVPPFTSTTPSAPSWRRVVSLA 146
            ++++   N     A  +A  W+   +    ++ +AVEL+V+         + P P    G+  + FLRFL L+A +PW+ K L VDPA   +  DR   +A   R  ER   GEA   P +++ TP  R+   W    TS  PSAP  +R+  LA
Sbjct: 1018 ISQVAGANASYAPAARLAGRWVAAHMMSNHVSPQAVELLVAAAFGGAGVPVGPPP----GSRITGFLRFLQLLARWPWSLKPLVVDPARELKEPDR---RALAHRFEERRAAGEA---PALYICTPRDRDSRHW----TSRGPSAPVLQRLSVLA 1158
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BLAST of mRNA_M-pyrifera_M_contig73937.17517.1 vs. uniprot
Match: A0A835Y8P3_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y8P3_9CHLO)

HSP 1 Score: 52.0 bits (123), Expect = 8.010e-5
Identity = 49/151 (32.45%), Postives = 71/151 (47.02%), Query Frame = 0 
Query:    1 MNKLCAENLHLGGAVCVAQAWLEG-VCGLRMATEAVELMVSQCLLDPRPLSLPGTVSSL--FLRFLTLVATFPWASKVLFVDPAASARATDREEAQAAFDRMRERAREGEAAPPPPIFLVTPSQRND--WVPPFTSTTPSAPSWRRVVSLA 146
            ++ +   N   G A  +A  WL   +    +  + VEL+++         + P   S L  FLRFL L+AT+PW  + L VDPA   +  DR   +A   R  ER   GEA   PP+++ TP  R    W    TS  PS  + +R+  LA
Sbjct:  967 VSYVAGANASYGPAARLAGRWLAAHMMSYHVGPQTVELLMAAAYGGAGGPASPPPGSRLTGFLRFLQLLATWPWHLRPLVVDPARELKEPDR---RALRKRFEERRAAGEA---PPMYICTPRDRESRHW----TSKGPSTAALQRLTLLA 1107
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig73937.17517.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2K3DK03_CHLRE3.200e-532.26Uncharacterized protein n=3 Tax=Chlamydomonas TaxI... [more]
A0A835Y8P3_9CHLO8.010e-532.45Uncharacterized protein n=1 Tax=Edaphochlamys deba... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 89..109
IPR035370Nrap protein, domain 5PFAMPF17406Nrap_D5coord: 11..151
e-value: 1.7E-20
score: 73.4
IPR005554NOL6/Upt22PANTHERPTHR17972NUCLEOLAR RNA-ASSOCIATED PROTEINcoord: 3..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig73937contigM-pyrifera_M_contig73937:632..1087 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig73937.17517.1mRNA_M-pyrifera_M_contig73937.17517.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig73937 632..1087 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig73937.17517.1 ID=prot_M-pyrifera_M_contig73937.17517.1|Name=mRNA_M-pyrifera_M_contig73937.17517.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=152bp
MNKLCAENLHLGGAVCVAQAWLEGVCGLRMATEAVELMVSQCLLDPRPLS
LPGTVSSLFLRFLTLVATFPWASKVLFVDPAASARATDREEAQAAFDRMR
ERAREGEAAPPPPIFLVTPSQRNDWVPPFTSTTPSAPSWRRVVSLAQAAL
HT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035370Nrap_D5
IPR005554NOL6/Upt22