mRNA_M-pyrifera_M_contig7383.17496.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig7383.17496.1
Unique NamemRNA_M-pyrifera_M_contig7383.17496.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig7383.17496.1 vs. uniprot
Match: A0A6H5KUL2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUL2_9PHAE)

HSP 1 Score: 628 bits (1620), Expect = 2.010e-217
Identity = 357/541 (65.99%), Postives = 403/541 (74.49%), Query Frame = 1
Query:    1 KVQATLDDKTSLAIVMCVVFLGDTARGIFFPTLWTNVKKLGGNRITLGYCVGAFSLGRRVVVS-SPYFGNLSTKHGYRSVLLVASSIIAVGALAYALAWDRASLIIAQIVMGVGSGTLGVTRAYVADKSTPEQRTYFLAYTTAVQYAGFTCMPFVGGLLSFLLGSRNIPLIGNALVLNQFTAPAFVMCIAAIVLFGLLYCVFKDSIPKPK------------KKGKP-TSTSAALVYSNASAAKYLMGAPSDVSLALS---NPDGEEEEWPPAE-FRKNGDASSGPTGLFVDSEDEEEARRTPAHSAATRDVERGAVTQSD-----CHRSMDANGYSRIQPGEEGGGSGTPSVANGHRGSSENGGHEEEGEGRGCRDWLCRCSMPSLPNMLIYGGFLLNLSTKGTIACFETLGAEYAMTHFGMSSAEAGSVFATFGSMGVISLLSMRAICRFYNDVQIVLGGMVVMMVACILFIPCPTGAAGIPMFLWAVFLMYSVGYPIGHTAVLGLFSKVVGAQPQGTLLGWFGSSGSVARIAFPVIAG 1554
            KV  TLDDK SL IVMCVVFLGDTARGIFFPTLW  V+ +GG+RITLGY VGAFS GR+V V  SPYFG LSTKHGYR VL+VAS +IA+GALAYALAW  A+LI AQI+MGVGSGTLGVTRAYVADKSTPEQRTY LAYTTAVQYAGFTCMPFVGG LSFL+  R IPL+G  LVL  FTAPA+VM +AA++LF LL  VF+DSIPK K            KK  P   T A + YS+ SAAKYLMGAPS+VSLA S   +    +++WPPAE   +NG  SSGP GLFVDS+DE+E RR    SA T       V  S+          D+NGY  +   EEG G              E GG EE    R    W CR   P+   +LIYGGFLLN+STKGTIACFETLGAEYAMTHFGM+SAEAGS FATFGS+GV+SLLSMR ICR+ NDVQIVLGGM VM+VAC++F+  P GA+G+P+FLWAVFLMYSVGYPIGHTAVLGLFSKVVGAQPQG LLGWFGS+GS+ARI FPV+AG
Sbjct:  160 KVSPTLDDKASLVIVMCVVFLGDTARGIFFPTLWKYVQAMGGDRITLGYSVGAFSFGRQVAVMISPYFGGLSTKHGYRKVLMVASGLIALGALAYALAWTTAALIGAQIIMGVGSGTLGVTRAYVADKSTPEQRTYLLAYTTAVQYAGFTCMPFVGGFLSFLIKDRRIPLLGEFLVLTSFTAPAYVMVVAALLLFTLLKLVFEDSIPKGKSTKTSKQVKASTKKSTPLVKTEAEIAYSSGSAAKYLMGAPSEVSLARSGWMSDSDTDDQWPPAEPGARNG--SSGP-GLFVDSDDEDETRRPSTVSATTPKTATAMVQDSEQGLLAAPSGNDSNGYGSVPAPEEGAG--------------EEGGEEEL---RREERWWCRT--PTASEVLIYGGFLLNMSTKGTIACFETLGAEYAMTHFGMTSAEAGSTFATFGSIGVVSLLSMRLICRYLNDVQIVLGGMGVMIVACLMFVRNPEGASGLPLFLWAVFLMYSVGYPIGHTAVLGLFSKVVGAQPQGALLGWFGSAGSLARIGFPVVAG 678          
BLAST of mRNA_M-pyrifera_M_contig7383.17496.1 vs. uniprot
Match: D8LGE0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGE0_ECTSI)

HSP 1 Score: 608 bits (1569), Expect = 3.510e-212
Identity = 347/534 (64.98%), Postives = 395/534 (73.97%), Query Frame = 1
Query:   46 MCVVFLGDTARGIFFPTLWTNVKKLGGNRITLGYCVGAFSLGRRVVVS-SPYFGNLSTKHGYRSVLLVASSIIAVGALAYALAWDRASLIIAQIVMGVGSGTLGVTRAYVADKSTPEQRTYFLAYTTAVQYAGFTCMPFVGGLLSFLLGSRNIPLIGNALVLNQFTAPAFVMCIAAIVLFGLLYCVFKDSIPKPKKKGKPTSTS-----------------AALVYSNASAAKYLMGAPSDVSLALS---NPDGEEEEWPPAEF-RKNGDASSGPTGLFVDSEDEEEARRTPAHSAAT---------RDVERGAVTQSDCHRSMDANGYSRIQPGEEGGGSGTPSVANGHRGSSENGGHEEEGEGRGCRDWLCRCSMPSLPNMLIYGGFLLNLSTKGTIACFETLGAEYAMTHFGMSSAEAGSVFATFGSMGVISLLSMRAICRFYNDVQIVLGGMVVMMVACILFIPCPTGAAGIPMFLWAVFLMYSVGYPIGHTAVLGLFSKVVGAQPQGTLLGWFGSSGSVARIAFPVIAG 1554
            MCVVFLGDTARGIFFPTLW  V+ +GG+RITLGY VGAFSLGR+V V  SPYFG LSTKHGYR VL+VAS +IA+GALAYALAW  A+LI AQI+MGVGSGTLGVTRAYVADKSTPEQRTY LAYTTAVQYAGFTCMPFVGG LSFL+  R IPL+G  LVL  FTAPA+VM +AA+VLF LL  VF+DSIP     GKPT TS                 A + YS+ SAAKYLMGAPSDVSLA S   +    +++WPPAE   +NG  SSGP GLFVDS+DE+E RR  A SA T         RD E G +     + S   NGY  +   +EG              ++  GG  E         W CR   P+   +LIYGGFLLN+STKGTIACFETLGAEYAMTHFGM+SAEAGS+FATFGS+GV+SLLSMR ICR+ NDVQIVLGGM VM+VAC++F+  P GA+G+P+FLWAVFLMYSVGYPIGHTAVLGLFSKVVGAQPQG LLGWFGS+GS+ARI FPV+AG
Sbjct:    1 MCVVFLGDTARGIFFPTLWKYVQAMGGDRITLGYSVGAFSLGRQVAVMISPYFGGLSTKHGYRKVLMVASGVIALGALAYALAWTTAALIGAQIIMGVGSGTLGVTRAYVADKSTPEQRTYLLAYTTAVQYAGFTCMPFVGGFLSFLIKDRRIPLLGEFLVLTSFTAPAYVMIVAALVLFALLKLVFEDSIPN----GKPTKTSKQVKVSTKKSTPLVKTEAEMAYSSGSAAKYLMGAPSDVSLARSGWMSDSDTDDQWPPAELGARNG--SSGP-GLFVDSDDEDETRRLSAVSATTTPTPSTAAVRDSELGLLATPSGNNS---NGYGSVPAAKEG--------------AAGEGG--EXXXXXXXXRWWCRA--PTASEVLIYGGFLLNMSTKGTIACFETLGAEYAMTHFGMTSAEAGSIFATFGSIGVVSLLSMRLICRYLNDVQIVLGGMGVMIVACLMFVRSPEGASGLPLFLWAVFLMYSVGYPIGHTAVLGLFSKVVGAQPQGALLGWFGSAGSLARIGFPVVAG 506          
BLAST of mRNA_M-pyrifera_M_contig7383.17496.1 vs. uniprot
Match: D8LI50_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI50_ECTSI)

HSP 1 Score: 448 bits (1152), Expect = 6.410e-148
Identity = 276/554 (49.82%), Postives = 357/554 (64.44%), Query Frame = 1
Query:    1 KVQATLDDKTSLAIVMCVVFLGDTARGIFFPTLWTNVKKLGGNRITLGYCVGAFSLGRRVVVSSPYFGNLSTKHGYRSVLLVASSIIAVGALAYALAWDRASLIIAQIVMGVGSGTLGVTRAYVADKSTPEQRTYFLAYTTAVQYAGFTCMPFVGGLLSFLLGSRNIPLIGNALVLNQFTAPAFVMCIAAIVLFGLLYCVFKDSIPKPKKKGKPTSTSAALVYSNASAAKYLMGAPSDVSLALSNPDG-----EEEEWPPAEFRKNGDASS---GPTGL---------FVD--------------SEDEEEARRTPAHSAATRDVERG--AVTQSDCHRSMDANGYSRIQPGEEGGGSGTPSVANGHRGSSENGGHEEEGEGRGCRDWLCR---CSMPSLPNMLIYGGFLLNLSTKGTIACFETLGAEYAMTHFGMSSAEAGSVFATFGSMGVISLLSMRAICRFYNDVQIVLGGMVVMMVACILFIPCPTGAAGIPMFLWAVFLMYSVGYPIGHTAVLGLFSKVVGAQPQGTLLGWFGSSGSVARIAFPVIAG 1554
            +V+ TLDDK S A+V+  V L DTARGIFFPTLWT+V +LGG++I LGYCVGAFSLGR ++  SP FG +ST+HGYR  LL+++++++ G L YA+A    ++ ++Q+ +GVGSGTLGVTR YVADK+T EQRTY LAYTTAVQYAGFT MP +GG  S+LLGS  IPL+G  L+L QFTAPAF +   + VLF LL+ VF+D I   ++K   T++SA  +   AS         SD S  LS+ D      +++ WP AE+   G  SS   G TG          +VD               ED E+  +T   +AA      G  A  Q+  H S+          G E     T ++                GEG     WL R     +PS  +MLIYGGFLLN+STKGTI+CFET+GA YA+T F ++SAEAGSVFAT G++GV++LLSMR +C+ +ND+Q+VLGGM +M+V C +    PT   G+ +F+ AVFLMYSVGYPIGHTAVLGLFSKVVGAQPQG L+GWFGS+G++AR  FPV+AG
Sbjct:   84 EVRPTLDDKASFAVVLGDVLLVDTARGIFFPTLWTHVSQLGGDKIALGYCVGAFSLGRTLM--SPVFGRMSTEHGYRRALLISTALVSFGTLFYAVADSVFTVFLSQVFLGVGSGTLGVTRGYVADKTTKEQRTYLLAYTTAVQYAGFTVMPSLGGFFSYLLGSTEIPLLGRFLMLTQFTAPAFFVAAMSTVLFLLLWFVFQDGI---EQKPAKTTSSAKELSGTASGVTLTTDLGSDDSGCLSDDDDVPNQEQQDLWPAAEYSPPGSVSSDSGGRTGRGSPPSVVGQYVDISRDGGWGGSDDKGMEDVEDGYQTGLAAAAAGAAAAGNRAGVQATFHDSVQHEAKHGDVVGRE-----TATL----------------GEG----GWLARKLRLRLPSRGDMLIYGGFLLNVSTKGTISCFETIGAAYAITTFSLTSAEAGSVFATCGAIGVVALLSMRLLCKHFNDIQLVLGGMSLMIVTCAMLALPPT-FIGLNVFIAAVFLMYSVGYPIGHTAVLGLFSKVVGAQPQGALMGWFGSAGALARTCFPVLAG 606          
BLAST of mRNA_M-pyrifera_M_contig7383.17496.1 vs. uniprot
Match: D7FUX3_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUX3_ECTSI)

HSP 1 Score: 416 bits (1070), Expect = 1.120e-136
Identity = 253/523 (48.37%), Postives = 340/523 (65.01%), Query Frame = 1
Query:   31 SLAIVMCVVFLGDTARGIFFPTLWTNVKKLGGNRITLGYCVGAFSLGRRVVVSSPYFGNLSTKHGYRSVLLVASSIIAVGALAYALAWDRASLIIAQIVMGVGSGTLGVTRAYVADKSTPEQRTYFLAYTTAVQYAGFTCMPFVGGLLSFLLGSRNIPLIGNALVLNQFTAPAFVMCIAAIVLFGLLYCVFKDSIPKPKKKGKPTSTSAALVYSNASAAKYLMGAPSDVSLALSNPDGEEEE----WPPAEFRKNGDASSGPTGLFVDSEDEEEARRTPAHSAATRDVERGAVTQSDCHRSMDANGYSRIQPGEE---GGGSGTPSVANGHRGSSENGGHEEEGEGR-----GCRDWLCR---CSMPSLPNMLIYGGFLLNLSTKGTIACFETLGAEYAMTHFGMSSAEAGSVFATFGSMGVISLLSMRAICRFYNDVQIVLGGMVVMMVACILFIPCPTGAAGIPMFLWAVFLMYSVGYPIGHTAVLGLFSKVVGAQPQGTLLGWFGSSGSVARIAFPVIAG 1554
            S +IV+  + L DTARGIFFPTLWT+V +LGG++I LGYCVGAFSLGR ++  SP FG +ST+HGYR   L+++ +I   +L YA+A    ++ ++Q+ +G+GSGTLGVTRAYVADK+T EQRTY LAYTT+VQYAG T MP +GG  S+LLGS  IPL+G  L+L QFTAPAF +   + VLF LL+ VF+D I   ++K   TS+S   +   AS         SD S  LS+ D   +E    WP AE    G  S+  +G           R +P  S   + V+       D   S D  G   ++ G +   G       V      S+E+     +  GR     G   WL R     +PS  +MLIYGGFLLN+STKGTI+CFET+GA YA+ +F +++AEAGS+FA  G++GV++LLSMR +C+ +ND+Q+VLGG+ +M+V C +    PT   G+ +F+ AVFL+YS+GYPIGHTAVL LFSKVVGAQPQGTL+GWFGS+G+++R +FPV+AG
Sbjct:   14 SRSIVLGNLLLIDTARGIFFPTLWTHVIQLGGDKIALGYCVGAFSLGRTLL--SPVFGRMSTEHGYRRAFLISTVLIPFASLFYAVADSVLTVFLSQLFLGMGSGTLGVTRAYVADKTTKEQRTYLLAYTTSVQYAGLTVMPILGGFFSYLLGSTEIPLLGRFLLLTQFTAPAFFVAAMSTVLFLLLWSVFQDGI---EQKPAKTSSSGKELSGTASGVTLTTDLGSDDSGGLSDGDVPYQEQQDLWPAAEVSPPGSVSNSSSGGRT-------GRGSPP-SVVGQYVDTSG--DGDSGGSDDDKGMGHVEGGYQTGLGSAGNRAGVQAAFHVSAEDEAKHGDVVGRETSTLGEGGWLARNLWLRLPSRGDMLIYGGFLLNVSTKGTISCFETIGAAYAIINFSLTNAEAGSIFAACGAIGVVTLLSMRLLCKHFNDIQLVLGGVSLMIVTCAMLALPPT-FIGLHVFIAAVFLVYSIGYPIGHTAVLALFSKVVGAQPQGTLMGWFGSAGAISRASFPVLAG 520          
BLAST of mRNA_M-pyrifera_M_contig7383.17496.1 vs. uniprot
Match: A0A7S2V0P8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0P8_9STRA)

HSP 1 Score: 298 bits (764), Expect = 1.590e-91
Identity = 196/511 (38.36%), Postives = 281/511 (54.99%), Query Frame = 1
Query:   31 SLAIVMCVVFLGDTARGIFFPTLWTNVKKLGGNRITLGYCVGAFSLGRRVVVSSPYFGNLSTKHGYRSVLLVASSIIAVGALAYALAWDRASLIIAQIVMGVGSGTLGVTRAYVADKSTPEQRTYFLAYTTAVQYAGFTCMPFVGGLLSFLLGSRNIPLIGNALVLNQFTAPAFVMCIAAIVLFGLLYCVFKDSIPKPKKKGKPTSTSAALVYSNASAAKYLM--GAPSDVSLALSNPDGEEEEWPPAEFRKNGDASSGPTGLFVDSEDEEEARRTPAHSAATRDVERGAVTQSDCHRSMDANGYSRIQPGEEGGGSGTPSVANGHRGSSENGGHEEEGEGRGCRDWLCRCSMPSLPNMLIYGGFLLNLSTKGTIACFETLGAEYAMTHFGMSSAEAGSVFATFGSMGVISLLSMRAICRFYNDVQIVLGGMVVMMVACILF-IPCPTGAAGIPMFLWAVFLMYSVGYPIGHTAVLGLFSKVVGAQPQGTLLGWFGSSGSVARIAFPVIAG 1554
            S  ++  +V +GD ARG+ FPTLW  V+ LGG+R T GYCV AFS GR  + +SPYFG LST+ GY+ VLL+A +I  VG L YA A     L++ Q VMG G+GTLGVTRAYVAD ++  QRT ++AY TA+QYAGFT  P +G   + LLG            +++F+APA+    AA++   LL   F + IP  +++ K  + + ++    ++ ++ +    A S  S  + +P                    G  GL +            A S   RD    A + +    S+     S ++ G                                           S+   ++  GF+ N++TKGTI  +ETLGAE+A+T     SA+ G +FA+FG +GV++LLSMR +C  + DV +V  G+ +M+V+C+LF +   TG  G   F  A+F+MYSVGYPIGHTA++GLFSK+VG +PQG LLGWFGSSGS+ARI FP+++G
Sbjct:   67 SFCVIAYMVLVGDAARGLMFPTLWPLVESLGGDRSTQGYCVAAFSFGR--IFASPYFGQLSTEKGYKDVLLIAIAITVVGCLTYAHATSTWLLMVGQCVMGFGAGTLGVTRAYVADNTSSAQRTTYIAYITALQYAGFTVCPSLGAAFTLLLGDDTYS--WGPFQVSKFSAPAYFHIGAALLGGLLLQFAFDNYIPTARQRAKSRARAVSIRNRRSAGSRSVSFDSARSPRSPTVKSP-----------------MVQGSEGLEL-----------VATSPQQRD---SASSGTSATGSLTITNTSLVEDGL------------------------------------------SMWKFMLAWGFINNIATKGTIGAYETLGAEFAITALHFDSADTGFIFASFGFLGVLALLSMRYLCERFADVFLVFWGVFLMVVSCVLFYLVHVTGTVG---FSVAIFVMYSVGYPIGHTALIGLFSKIVGNRPQGALLGWFGSSGSLARIIFPLLSG 497          
BLAST of mRNA_M-pyrifera_M_contig7383.17496.1 vs. uniprot
Match: A0A7S3UZ09_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UZ09_HETAK)

HSP 1 Score: 293 bits (751), Expect = 2.760e-90
Identity = 202/518 (39.00%), Postives = 268/518 (51.74%), Query Frame = 1
Query:   10 ATLDDKTSLAIVMCVVFLGDTARGIFFPTLWTNVKKLGGNRITLGYCVGAFSLGRRVVVSSPYFGNLSTKHGYRSVLLVASSIIAVGALAYALAWDRASLIIAQIVMGVGSGTLGVTRAYVADKSTPEQRTYFLAYTTAVQYAGFTCMPFVGGLLSFLLGSRNIPLIGNALVLNQFTAPAFVMCIAAIVLFGLLYCVFKDSIPKPKKKGKPTSTSAALVYSNASAAKYLMGAPSDVSLALSNPDGEEEEWPPAEFRKNGDASSGPTGLFVDSEDEEEARRTPAHSAATRDVERGAVTQSDCHRSMDANGYSRIQPGEEGGGSGTPSVANGHRGSSENGGHEEEGEGRGCRDWLCRCSMPSLPNMLIYGGFLLNLSTKGTIACFETLGAEYAMTHFGMSSAEAGSVFATFGSMGVISLLSMRAICRFYNDVQIVLGGMVVMMV-ACILFIPCPTGAAGIPMFLWAVFLMYSVGYPIGHTAVLGLFSKVVGA--QPQGTLLGWFGSSGSVARIAFPVIAG 1554
            A + D  S  ++  VVF+GDTARG+ FPTLW  V KLGG  +T G+ V AFS GR  V+SSP+FG +ST +GY+ VL  A+ ++  G   YA A +   LI  Q+V+G+GSGTLGVTRAYVAD ST   RT  +AY TA+QY GFT  P VGGLLS+LLG R + L+   L L Q+TAPA +M   A+V   LL   F+D +P  +                      L   PS  +L                                           PA S A   V                  Y    P         P+             H EE   R             L   ++  G ++N+ TKG++AC+ETLG   A+  FGMS  +AG +F++ G +GV +LLSM+ +  + +D+++V  G +VM+  A +LF+    G  G   F  AVFLMYSVGYPIGHTAV+G+FSK+VGA  Q QG+LLGWFGS+GS+ARI FP++ G
Sbjct:   41 AMVKDWVSFLVIGFVVFIGDTARGLMFPTLWPLVSKLGGTELTQGFTVAAFSFGR--VLSSPHFGKMSTDYGYKKVLTFAACVMIAGCFLYATAQNCYWLIAGQVVIGLGSGTLGVTRAYVADNSTKRSRTVLMAYLTALQYGGFTVTPCVGGLLSYLLGDRELSLLPG-LSLTQYTAPALLMAALALVAIALLAGPFRDYVPAERAA--------------------LARPPSRPAL-------------------------------------------PASSVADNLVN-----------------YKPTTP--------LPAA------------HPEEVSTR-------------LWRSMVAWGLIMNVVTKGSVACYETLGTIVAIGSFGMSKPDAGFLFSSCGFLGVFALLSMKCLTAWADDIKLVFYGCLVMVASATLLFLDARIGLHG---FFAAVFLMYSVGYPIGHTAVIGIFSKIVGARTQQQGSLLGWFGSAGSLARIIFPILCG 439          
BLAST of mRNA_M-pyrifera_M_contig7383.17496.1 vs. uniprot
Match: D8LI51_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI51_ECTSI)

HSP 1 Score: 287 bits (734), Expect = 4.300e-88
Identity = 191/427 (44.73%), Postives = 252/427 (59.02%), Query Frame = 1
Query:  334 VGSGTLGVTRAYVADKSTPEQRTYFLAYTTAVQYAGFTCMPFVGGLLSFLLGSRNIPLIGNALVLNQFTAPAFVMCIAAIVLFGLLYCVFKDSIPKPKKKGKPTSTSAALVYSNASAAKYLMGAPSDVSLALSN---PDGEEEEW-PPAEFRKNGDASSGPTGLFVDSEDEEEARRTPAHSAATRDVERGAVTQSDCHRSMDANGYSRIQPGEEGGGSGTPSVANGHRGSSENGGHEE-------------EGEGRGCRDWLCR---CSMPSLPNMLIYGGFLLNLSTKGTIACFETLGAEYAMTHFGMSSAEAGSVFATFGSMGVISLLSMRAICRFYNDVQIVLGGMVVMMVACILFIPCPTGAAGIPMFLWAVFLMYSVGYPIGHTAVLGLFSKVVGAQPQGTLLGWFGSSGSVARIAFPVIAG 1554
            +GSGTL VTRAYVADK+T EQRTY LAYT + QYAGFT MP +GG  S+LLGS  IPL+G  L+L QFTAPAF                F   + KP K    T++S   +   AS         SD S  LS+   PD E ++  P AE+   G  SS  +G           R +P  S   + V+       D   S D  G   ++ G +     T   + G+R   E   H+              E    G   WL R     +PS  +M IYGGFLLN+STKGTI+CFET+GA YA+T F +++AEAGS+FA  G++GV++LLSMR +C+ +ND+Q+VLGG+ +M+V C +    PT   G+ +F+ AVFL+YS+GYPIGHTAVL LFSK+VG QPQGTL+GWFGS+G+++R +FPV+AG
Sbjct:    1 MGSGTLKVTRAYVADKTTKEQRTYLLAYTRSQQYAGFTVMPILGGFFSYLLGSTEIPLLGRFLLLTQFTAPAF----------------FVAELKKPAK----TTSSGKELSGTASGVTPTTDLGSDDSGGLSDGDVPDQEHQDLRPAAEYSPPGSVSSNSSGPRT-------GRGSPP-SVVGQYVDTSG--DGDSGGSDDDKGMGHVEGGYQ-----TGLGSAGNRAGVEVTFHDSVQHEAKHGDVVGRETSTLGEGGWLARKLRLRLPSRGDMHIYGGFLLNVSTKGTISCFETIGAAYAITTFSLTNAEAGSIFAACGAIGVVTLLSMRLLCKHFNDIQLVLGGVSLMIVTCAMLALPPT-FIGLHVFIAAVFLVYSIGYPIGHTAVLALFSKMVGTQPQGTLMGWFGSAGAISRASFPVLAG 391          
BLAST of mRNA_M-pyrifera_M_contig7383.17496.1 vs. uniprot
Match: A0A836C8M5_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8M5_9STRA)

HSP 1 Score: 277 bits (709), Expect = 1.970e-83
Identity = 199/521 (38.20%), Postives = 270/521 (51.82%), Query Frame = 1
Query:   16 LDDKTSLAIVMCVVFLGDTARGIFFPTLWTNVKKLGGNRITLGYCVGAFSLGRRVVVSSPYFGNLSTKHGYRSVLLVASSIIAVGALAYALAWDRASLIIAQIVMGVGSGTLGVTRAYVADKSTPEQRTYFLAYTTAVQYAGFTCMPFVGGLLSFLLGS------RNIPLIGNA-LVLNQFTAPAFVMCIAAIVLFGLLYCVFKDSIPKPKKKGKPTSTSAALVYSNASAAKYLMGAPSDVSLALSNPDGEEEEWPPAEFRKNGDASSGPTGLFVDSEDEEEARRTPAHSAATRDVERGAVTQSDCHRSMDANGYSRIQPGEEGGGSGTPSVANGHRGSSENGGHEEEGEGRGCRDWLCRCSMPSLPNMLIYGGFLLNLSTKGTIACFETLGAEYAMTHFGMSSAEAGSVFATFGSMGVISLLSMRAICRFYNDVQIVLGGMVVMMVAC-ILFIPCPTGAAGIPMFLWAVFLMYSVGYPIGHTAVLGLFSKVVGAQPQGTLLGWFGSSGSVARIAFPVIAG 1554
            L D  SLA ++ VV +GDTARGI FPTL + V  +GGN+ TLG  V  FSLGR  V++SP  G  ST++G R VL  A S +++GA+ YALA   A LI AQ++MG+GSGTLGVTR YVAD++   +RT  LA  TAVQY GF C P +G +L   +G        +  L G   L  +QFTAP +++  A+  +  L++   +D+ P                     AAK     P     A+    GE+                                      A                    A  Y  ++  E     G  + A  H    +N  H+           L R +  +     I G FLLN++ KG IA +ETLGA YA+    +S A AG  FATFG+ GV++LLSM A+ R +NDVQ+++GG VVM+++C +L +P   G  G   F+ ++FL YS+GYPIGH+AVLG+FSK+VG + QG L G F S+GSVARIAFP+  G
Sbjct:   50 LADYKSLATILTVVLIGDTARGIVFPTLSSYVILMGGNKSTLGAAVAGFSLGR--VIASPLLGKWSTQYGCRRVLAAALSALSLGAILYALASSTAWLIAAQVMMGLGSGTLGVTRGYVADRTPNARRTGMLAMLTAVQYGGFACTPLLGAMLCRAIGDGAWGFGHHFALGGWVRLEWSQFTAPGYLLAGASAAVALLVWLCLEDAAP---------------------AAKATPPRPQQQQKAVEGAVGEK-------------------------------------MALLHQXXXXXXXXXXXXXXXQAVAYGDVEDLE-----GAAAAARNHDAQQQN--HDAP---------LTRSAEAA-----ILGAFLLNVACKGVIATYETLGANYAINTLSLSPASAGLFFATFGAGGVVALLSMGALSRRFNDVQLIVGGAVVMLLSCALLVVPTQGGGLGYAGFVASIFLQYSIGYPIGHSAVLGMFSKIVGKRAQGALQGLFASAGSVARIAFPLAVG 489          
BLAST of mRNA_M-pyrifera_M_contig7383.17496.1 vs. uniprot
Match: A0A7S1XVC4_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XVC4_9STRA)

HSP 1 Score: 275 bits (704), Expect = 2.010e-82
Identity = 188/511 (36.79%), Postives = 259/511 (50.68%), Query Frame = 1
Query:   22 DKTSLAIVMCVVFLGDTARGIFFPTLWTNVKKLGGNRITLGYCVGAFSLGRRVVVSSPYFGNLSTKHGYRSVLLVASSIIAVGALAYALAWDRASLIIAQIVMGVGSGTLGVTRAYVADKSTPEQRTYFLAYTTAVQYAGFTCMPFVGGLLSFLLGSRNIPLIGNALVLNQFTAPAFVMCIAAIVLFGLLYCVFKDSIPKPKKKGKPTSTSAALVYSNASAAKYLMGAPSDVSLALSNPDGEEEEWPPAEFRKNGDASSGPTGLFVDSEDEEEARRTPAHSAATRDVERGAVTQSDCHRSMDANGYSRIQPGEEGGGSGTPSVANGHRGSSENGGHEEEGEGRGCRDWLCRCSMPSLPNMLIYGGFLLNLSTKGTIACFETLGAEYAMTHFGMSSAEAGSVFATFGSMGVISLLSMRAICRFYNDVQIVLGGMVVMMVACILFIPCPTGAAGIPMFLWAVFLMYSVGYPIGHTAVLGLFSKVVGAQPQGTLLGWFGSSGSVARIAFPVIAG 1554
            D  S  I+  VV LGD+ARGI FPTLW  V+ LGG+R   GY VG+FS GR   ++SP  G  S KHGY++ L + S +I +G   YA A +   LI  QI++G+GSG+LGVTRAYVA+ S+P  RT  LAY TAVQY GFTC PF+G +L+++ G      I N + +++F AP +   + AI    LL+  F++                   +S A    + +G P               E P  + +     +S   G  +DSE EE                                                                       GC +       P L ++L      LN++TKG+IACFETLGA +A   F MS   AG +FA  G+ GV+SLL  R +C  +++VQ++LGG++VM+V+C L +        I  F  AV LMY++GYPIGHTAV+G+FSKV   + QGTLL WFG++GS+ARI FP+ +G
Sbjct:  116 DWGSALIICLVVLLGDSARGIMFPTLWPLVQSLGGDRTVHGYTVGSFSFGR--ALASPCIGRWSGKHGYKATLGICSLVICLGGFVYATARNLPMLIAGQILIGIGSGSLGVTRAYVAELSSPASRTVLLAYLTAVQYCGFTCTPFIGAILTYIFGGGYT--IANLVEVDKFNAPGYFTSLWAISNAILLFVAFREP-----------------AHSLARIEAHKLGLPLP-------------ESPKKQPKAAAKPASPLEGFDIDSEGEE-----------------------------------------------------------------------GCFE----SEEPVLASLLF-----LNVATKGSIACFETLGAMFAFAVFSMSIPSAGQLFAGCGAAGVVSLLFFRPLCNVFDEVQLILGGILVMVVSC-LTVASLHSTTPIYFFYGAVALMYAIGYPIGHTAVIGVFSKVAEGKSQGTLLSWFGTAGSLARILFPMFSG 511          
BLAST of mRNA_M-pyrifera_M_contig7383.17496.1 vs. uniprot
Match: A0A7S1ZB43_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZB43_TRICV)

HSP 1 Score: 275 bits (702), Expect = 4.390e-82
Identity = 179/516 (34.69%), Postives = 259/516 (50.19%), Query Frame = 1
Query:   16 LDDKTSLAIVMCVVFLGDTARGIFFPTLWTNVKKLGGNRITLGYCVGAFSLGRRVVVSSPYFGNLSTKHGYRSVLLVASSIIAVGALAYALAWDRAS---LIIAQIVMGVGSGTLGVTRAYVADKSTPEQRTYFLAYTTAVQYAGFTCMPFVGGLLSFLLGSRNIPLIGNALVLNQFTAPAFVMCIAAIVLFGLLYCVFKDSIPKPKKKGKPTSTSAALVYSNASAAKYLMGAPSDVSLALSNPDGEEEEWPPAEFRKNGDASSGPTGLFVDSEDEEEARRTPAHSAATRDVERGAVTQSDCHRSMDANGYSRIQPGEEGGGSGTPSVANGHRGSSENGGHEEEGEGRGCRDWLCRCSMPSLPNMLIYGGFLLNLSTKGTIACFETLGAEYAMTHFGMSSAEAGSVFATFGSMGVISLLSMRAICRFYNDVQIVLGGMVVMMVACILFIPCPTGAAGIPMFLWAVFLMYSVGYPIGHTAVLGLFSKVVGAQPQGTLLGWFGSSGSVARIAFPVIAG 1554
            + DKT   IV  V+ +GD +RG+FFPT+W  V+ +GG+ +TLGY V AFS GR  ++SSP FG+ S  HGY   L+++ SI+A+G L Y+  ++ A    LI  Q ++GVGSGTLGVTRA+VAD +    RT ++A+ TAVQYAGFT  PF G     +    +  L     VLN FTAPA+ M +   +   LL   F+    + + KG   S                                        E  K+  A+S    LF                        G +T  D                                                                 I G  LLN++TKG+IA FETLG  +A  HF +S+++AG++ AT GS+GV+SLL M  + ++ +DVQ+++GGM++M++  +  +        +  +++A+FL+YS+GYPIGHTAV+GLFSK+VG +PQGTLLGWF S+GS+AR+ FP+++G
Sbjct:  136 ISDKTGFFIVCLVILIGDMSRGVFFPTMWPLVQHVGGDTVTLGYSVAAFSFGR--IMSSPLFGSWSVTHGYTKTLILSVSILAMGTLLYSQVYNVAKPEFLIFGQTILGVGSGTLGVTRAFVADVTPNRNRTTYMAWLTAVQYAGFTVTPFFGAFFYKIFMDGDRELRSGIFVLNGFTAPAYFMALICFITLILLVTKFQG---RNRSKGAKKSK--------------------------------------RELAKDEVANS--RTLF------------------------GLLTVYDA---------------------------------------------------------------CILGCMLLNVATKGSIASFETLGIAFAEGHFNLSASQAGTIVATCGSIGVVSLLCMGQLAKYLSDVQMIVGGMLIMIIGVLSIVGMEADENSVWRYMFAIFLIYSIGYPIGHTAVIGLFSKIVGRRPQGTLLGWFASAGSLARMMFPIMSG 519          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7383.17496.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KUL2_9PHAE2.010e-21765.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGE0_ECTSI3.510e-21264.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LI50_ECTSI6.410e-14849.82MFS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FUX3_ECTSI1.120e-13648.37MFS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S2V0P8_9STRA1.590e-9138.36Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3UZ09_HETAK2.760e-9039.00Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
D8LI51_ECTSI4.300e-8844.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C8M5_9STRA1.970e-8338.20Major facilitator superfamily domain-containing pr... [more]
A0A7S1XVC4_9STRA2.010e-8236.79Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S1ZB43_TRICV4.390e-8234.69Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7383contigM-pyrifera_M_contig7383:4802..10847 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score452.6
Seed ortholog evalue2.5e-124
Seed eggNOG ortholog2880.D8LI50
KEGG koko:K12307
KEGG TC2.A.1
KEGG Pathwayko04142,map04142
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.major facilitator superfamily
EggNOG OGsKOG2325@1,KOG2325@2759
Ec32 ortholog descriptionMajor facilitator superfamily
Ec32 orthologEc-16_003690.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000
Exons4
Model size1554
Cds size1554
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7383.17496.1prot_M-pyrifera_M_contig7383.17496.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig7383 4802..10847 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816636.1098416-CDS-M-pyrifera_M_contig7383:4801..49801622816636.1098416-CDS-M-pyrifera_M_contig7383:4801..4980Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7383 4802..4980 +
1692278090.602344-CDS-M-pyrifera_M_contig7383:4801..49801692278090.602344-CDS-M-pyrifera_M_contig7383:4801..4980Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7383 4802..4980 +
1622816636.1206295-CDS-M-pyrifera_M_contig7383:6071..63141622816636.1206295-CDS-M-pyrifera_M_contig7383:6071..6314Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7383 6072..6314 +
1692278090.615905-CDS-M-pyrifera_M_contig7383:6071..63141692278090.615905-CDS-M-pyrifera_M_contig7383:6071..6314Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7383 6072..6314 +
1622816636.1315234-CDS-M-pyrifera_M_contig7383:8285..93061622816636.1315234-CDS-M-pyrifera_M_contig7383:8285..9306Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7383 8286..9306 +
1692278090.629075-CDS-M-pyrifera_M_contig7383:8285..93061692278090.629075-CDS-M-pyrifera_M_contig7383:8285..9306Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7383 8286..9306 +
1622816636.1464636-CDS-M-pyrifera_M_contig7383:10736..108471622816636.1464636-CDS-M-pyrifera_M_contig7383:10736..10847Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7383 10737..10847 +
1692278090.639541-CDS-M-pyrifera_M_contig7383:10736..108471692278090.639541-CDS-M-pyrifera_M_contig7383:10736..10847Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7383 10737..10847 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig7383.17496.1

>prot_M-pyrifera_M_contig7383.17496.1 ID=prot_M-pyrifera_M_contig7383.17496.1|Name=mRNA_M-pyrifera_M_contig7383.17496.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=518bp
KVQATLDDKTSLAIVMCVVFLGDTARGIFFPTLWTNVKKLGGNRITLGYC
VGAFSLGRRVVVSSPYFGNLSTKHGYRSVLLVASSIIAVGALAYALAWDR
ASLIIAQIVMGVGSGTLGVTRAYVADKSTPEQRTYFLAYTTAVQYAGFTC
MPFVGGLLSFLLGSRNIPLIGNALVLNQFTAPAFVMCIAAIVLFGLLYCV
FKDSIPKPKKKGKPTSTSAALVYSNASAAKYLMGAPSDVSLALSNPDGEE
EEWPPAEFRKNGDASSGPTGLFVDSEDEEEARRTPAHSAATRDVERGAVT
QSDCHRSMDANGYSRIQPGEEGGGSGTPSVANGHRGSSENGGHEEEGEGR
GCRDWLCRCSMPSLPNMLIYGGFLLNLSTKGTIACFETLGAEYAMTHFGM
SSAEAGSVFATFGSMGVISLLSMRAICRFYNDVQIVLGGMVVMMVACILF
IPCPTGAAGIPMFLWAVFLMYSVGYPIGHTAVLGLFSKVVGAQPQGTLLG
WFGSSGSVARIAFPVIAG
back to top

mRNA from alignment at M-pyrifera_M_contig7383:4802..10847+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig7383.17496.1 ID=mRNA_M-pyrifera_M_contig7383.17496.1|Name=mRNA_M-pyrifera_M_contig7383.17496.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6046bp|location=Sequence derived from alignment at M-pyrifera_M_contig7383:4802..10847+ (Macrocystis pyrifera P11B4 male)
AAGGTGCAAGCGACGCTGGACGACAAGACTTCGCTGGCGATCGTCATGTG CGTCGTTTTCTTGGGGGACACAGCCCGCGGTATTTTCTTCCCGACCCTCT GGACGAACGTGAAGAAGTTGGGGGGCAACCGCATCACCCTCGGGTACTGC GTGGGGGCCTTCAGCCTCGGCAGGCGAGTGTGATTTGTCGACCCTTTTCT GGCTGCGGCCCCCTTTTGGGTAGCAGACTGTTTACCAGGTATACTTTGGA GTGATTTTGTTTCCCGAGATGGGACTGCAGTTCCTTAGCAGGGGTCATAG CCCAGCGCTCCTCGGCAAAGCTTGTGGAAACACTCTTTGGACGTGATGAC TCTCTTACAACTCGAGAGGGGAAAACTGGCGGGGGAAACAGTGATGCTTA CGGCGGAACGGCCCATGACGTGATCGAGGGGTGGCCTACACAATTCGGTG TCCGAGTTGCGATGCAAGGAGTCGTGCGTAGATGAGGCGCGGGCGCAGGG AGGAACAGCGATCCTTCCCTTAGTGCTGGTCGCTGAAGACGCTGTCGCTA GCAGACGGCTGACAGCCTCTCAAAGTTCTCCTCGTTTCTGGTGGCTCTCT TGGGATCGCAAAGGGGGTTTAAGTTATAACCCATTCAGTGCTGCGGTCCT TTTTTTGAGGACAACTTAGTTGGCATTGTGAGTATGGGACACTTGTTTGC GGTAGTATATAGTAGAAGGGAGGGACTCAAGACCAACCCTGGCCGACCGG GGGTTGGAGGAGGGGGGAGGTGGGGAGGGGTGGGGGGGGTCAGGCGAGAG AGGGTGGCTGTATTGACCTAGGCTCAAACTGGTCACAGGTTGGAATATGC CCGACTCGTTTAGGACTGCACTCGCATCGTGGGGACAAAATTTACGTAAT TTGGGTCAGATTTAGGTTCCCCGTAGGGTGCACTAGTGGCAGTAGAGCAA GACGCTTGCTTCGTTTAATAGGTGCAATCTGCATTTTGTGTATAGGCTCC CACTTTTGAGGAGAGGTTTACGCAGGCTTTCATTTTCTCAGTCGAATAAG GATTGAAAACGAATGTGTGATGACATTTCTTTCTTTGTGACAGATGAAAA AACAAATATGTGCTGTCATTTTTACGATAGAAAAGGGGTCAAAACACTGT TGTATAATGTGTGGGACTAATTTTGCAGTTTTTGCAGTGAGACTGAAAAG TTTGTTTTTTTTTCAACTAACTGCTTTCCGGCACACACAACCCCGCGTTC TCTTTGCTACATATGTACAGGGTGGTGAGCTCCCCCTACTTCGGCAACCT GTCTACGAAGCACGGGTACCGATCGGTCCTCTTGGTCGCCAGCAGCATCA TCGCCGTGGGCGCGTTGGCGTACGCTCTAGCTTGGGACAGAGCATCCCTC ATCATTGCCCAGATAGTAATGGGCGTGGGCAGCGGCACCCTCGGAGTGAC TAGGGCCTACGTGGCCGACAAGTCGACCCCAGAACAGAGGACATACTTCC TGGCTTACACTACGTGAGACGTTTTTCGACAGGGGATAGGGGTTGCAACT AGGGGTAGCACTTTTCGGCCCAAGATATTTCTACCTGACCGGACTCCTTC CCCCAGTATGGTTGGAATATTTACACCGTATGTACTACTATTTTTCGTGT TTTTTTCTATGTTTTCGTGATACACCTACTGTACGTCCCTAGGCCACGAG ATTCACCGGGTCGCACTCTTCGCTTTTCTCCGAAATCAGGTTCTGGGTGA GGTATAGTGCCCCTACACCGTAATCAAGTAAAAAGCCTCACCAAAATTAG GTGCTACCCCTATAAGGCAAAACACGCGTCGTGAGTGAAGCGAGCGCCAG CCGTTTTTATTTTTTGGGCGGTCTTTTTTGTTTCGCTGTCTGTCGCCGCA GTTGGCGAAAAAAAAGAAAAAGAAGAAACGCCACGAGTTGCCGCAGATCC TTAAAAAAAAGTTCTGAATGGACTTTTTTTTTTTTAATCGGTCCGCCCGT CCGTTCCCCCCGTCCGTCCGTCCGTCCAAAAATATATATATTAATTGAAT GATCTGCGTCCGAAATAATAGTTGTCCGAAACTACCTCATGATTTTGTCC GTCGGAAAGCATGCTATTACAGCAGTATTACGGGGGACCATAGTAAATAG GACCCCCTACACAAAGAAAACTATACATTTACCTATTTTTACCAACAAAT ATTTGGTCCTGTTTACTATGGCCCCCCGTAATAGTATTGACCGTCTTGGG GACTTTGGAGAATAAAGTTGACCGTGAAAGGTGACTAACGCGGCAACGGC CACTACTGCTGTGTAATTGGGGGATGACACAAAATTGGTGTCCGAGTTAC AATGGTTGAATGCAAAGGAGTCCTACGGCACGAGGGTCAACAACAATATC CTACCCGCCCTACCCGCACTGCTGGGCGGTCATGCTGTTCCTAGATGGTT GGTGACACCAGAAGTTGTCGATGTTTTCGTCGCTATCTCGGGAGTTCCAG ATTGATTCATACGTATTCTTCTTGGCTAAACAGGCTTTAAGAAATCTATC AAGAAATACCCTTAGAAAATATCAAGTATACAAGGAAGAAAGCAGGTATG TGGCCTATATAGGTGCTCGCCGTGTACTTGGAAGGAGAGTGCAATGAATA TCGCCCCTTCTCTGCTCCTCCGCTAGGATAAGGATAGATGGATGTTAGCC TGTAACCTCTTTTCGGGTTTCTTACCATAAGGCCGATACTGCTGTATGAT ATACCAGGTACATACATAATATATGCCAGGTACGAGATATATATAGTATG TGTATCCACTGCGTACGTAAAACCCTCTGTGCATGCATGCTCGCCTGTAG AACCGTTATATAGAAATGTGTTTGTTGTTTTGTTGTTGCGAGTGTTCGCG GGGGGGCACTTAGCCGAGGCGCGCGCGTGCGATTTGAAACCCGCCACCCT TTGGATGTGCATCCCACGTGTTTGGGGCAACATTGCTTGGAATGAGTGCG GAATCGTTTTTACAGATTATTCGCTAAAGGGTTTATATGCCATCGGATTG CCCCCGTTGCCACTTCGCCATTTTTTTGGTGGCTGACTTTCGGTTGTAGA CACCAGTGTGGCCAGGTGCTTATTTTCCGAACAATTTCTCAGAGGGCTGT TTGTCCCCGCGTCCTGTCCCGCTTCGCTGTCATTGGTGCCAGGTTCTTGA ATCCCCAGACGAGTTTTGACAAAAACTGTCCACGCGTACCGTACCGTCCC GTTTTTTGTTGTCGTCTTTTGCCCCTCGTCCCGTCCCGTTTTTTGTTTGC TGCCCCTCATCCCGTCCCGTTTTTTGTGTTTTTTCCCCGCGTCTCATTTT TTTTGTTTTTCGCCGCGCGTCTTGTCCCGTTTTTTTTTGTTTTCTGCCTC GCGTCCGGGGTACCTTTTTTTTGTCTCTTGCCCCGCGTTCCGTCTCGTTA AAAAATGGGTATAAATTTGCTGCGTCCGGAGCAGAGCCGTGCAGTATGCG GGCTTCACCTGCATGCCCTTCGTGGGAGGCCTTCTGTCTTTCCTGCTCGG GTCCCGCAACATCCCGCTCATCGGGAATGCGCTGGTCCTCAACCAGTTCA CTGCCCCCGCCTTCGTTATGTGCATCGCGGCCATAGTGCTCTTCGGACTC CTGTACTGCGTGTTCAAGGACAGCATCCCCAAGCCTAAGAAGAAGGGAAA GCCCACGTCGACCTCTGCCGCCCTGGTGTACTCTAACGCCTCCGCTGCCA AGTATCTCATGGGAGCGCCCTCGGATGTCTCGCTCGCGCTGAGCAATCCG GACGGAGAGGAGGAGGAGTGGCCCCCCGCTGAGTTTCGTAAGAACGGGGA TGCGAGTAGTGGACCGACTGGGCTGTTCGTGGACTCCGAGGACGAGGAGG AGGCGCGGAGGACTCCGGCTCACTCCGCCGCGACGAGAGATGTTGAACGG GGTGCGGTGACGCAGTCCGACTGCCACCGAAGCATGGACGCGAACGGATA CAGTCGAATCCAGCCTGGGGAGGAGGGAGGAGGATCAGGGACACCGTCCG TTGCGAACGGTCATCGGGGGTCCTCCGAAAATGGAGGCCATGAGGAGGAG GGGGAGGGGAGGGGGTGTCGCGATTGGTTGTGCCGATGCAGCATGCCGAG CCTCCCCAACATGCTCATATATGGAGGGTTCCTCCTGAACTTGAGCACGA AGGGGACCATCGCGTGCTTCGAGACGCTGGGGGCGGAGTACGCGATGACG CACTTCGGCATGTCCAGCGCCGAGGCCGGGTCTGTCTTTGCCACCTTCGG CTCGATGGGCGTCATCTCGCTGCTCTCCATGCGTGCAATCTGCCGCTTCT ACAACGACGTGCAGATCGTGCTGGGCGGCATGGTGGTGATGATGGTGGCC TGCATTCTCTTCATCCCTTGCCCTACAGGGGCCGCCGGCATACCTATGTT CCTCTGGGCGGTGTTCCTCATGTACTCCGTGGGGTACCCCATCGGGCATA CAGCTGTAAGTCCCCGTCCCCACCCCCCTCCCGCCTCCTTCATCATCACT TTCTCTTTCAGCGTCGCCCAAAGATATTTCCATGCCTTGGATGGTAGGAG GGGCCAACCCTGTGTACCTGTTTACGTCGAAAAGCTTACGGTAGAGCTGC AACGGAATGTAAAAGCTGACCCGCATATTGCAGGTTGAATACAGCATGCG CATTACGGTTGTACGTAGCCTCGCTTCCTTCATTCGTCACCGTCAGTTTC GTGCTGAGGCTCAAATACAACTCTCAACTTACGATTCGAGCATCATCCCA TTCACGCCGAAGAGCTCCAGCGAAGTGTAAAGCTGACCGCACATGGGCGG AGTGGGAACTACTGAAAGTATTTTAGCGAGCTAAAAAGCGGCGAGTGAAG CTCGGTCTTCTATTGTGCGATGCCATCAAGCGTCTAGGAAGAGCATGCAG TATTACAACTATCACTATGTACGTGGGTCTTATATCTCCCTAGGTACACC ATGTTGCAGTTCGGACACATCCCGTGTCCCCTATCCCGTTTATTGTGTCC GCTGCTGTAGTCGCATTTTTTTCGTGAATGGTTCCCTCTGAAGTCCCAAA GGGATTAACAATGAATCTCCAGTCGGAAAAATAGCAGCCGGGCACACAAG TACTCTTACGTAGTACCTTTGTGTAGGGCTTGTTCGCCGCGTCAGCTTCC TCCTGAGGCTGAATACTTACAGCTCTCCGTTTGTTGTTGAGAGTACATAT GATACGACCCCATTCATTCATGCGAACCGTGTTTAGTCCACTCCGCGCCC CCCACGAGGCCGTCGCTCAAGGCGTTCGGTGTTTACGCGTCACAGCCTAA AAAAAGCCAACAAAACCCATGCTAAGGAAACAGACATAATACGATATAAT AGTGATCCCTCTATAGTGCCGGTATGTGTGCCCCAGCCAGCTATACCGGC ACTATCAAGTAGCCACTGGCACTACTCCGCACGCTGCCACACTGATTAAT CATCCCGTATGTGCAAAGCGATTTGACAGGCAATATAGCGGGCAGCCGGC ACTACCCAACCGGCGCTATAGAGGGACCACTTCCTTGTACCCGTAGTATT TTTTTCTTCGGTTTGTTGCAACAAGAACAGCTACGTATTGTAGCGGGAAA CCGGCACTATAGAGTGACCACTGCTGTATATTCGTAGTATTCTCTTCGGT TAGGTGCAACAAAAACGGCTCCTTTAGCGGGCAGCCGGCACTAAAGACGG GCCACTACTGTCGTGTGGACGTACAGCAGTAGTAGTAGTAGTAGTAGTAG TAGTAGTAGTAGTAGTAGTAGTTGTTGTTGTTGTTGTTGTTGTTGTTGTT TTACTCTGTTGCTTGCAGCAAGAAGGGCTACTAAGTATTTCCCCCTTTGC ACGCCCCTGGCCTCTCGGTGACTCTGGGGTGACAGGTGCTGGGGCTGTTC TCCAAGGTCGTCGGGGCGCAGCCGCAGGGCACTCTCTTGGGATGGTTTGG CTCCTCGGGCTCTGTGGCTCGCATCGCGTTTCCAGTCATCGCCGGT
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig7383:4802..10847+

>mRNA_M-pyrifera_M_contig7383.17496.1 ID=mRNA_M-pyrifera_M_contig7383.17496.1|Name=mRNA_M-pyrifera_M_contig7383.17496.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=3108bp|location=Sequence derived from alignment at M-pyrifera_M_contig7383:4802..10847+ (Macrocystis pyrifera P11B4 male)
AAGGTGCAAGCGACGCTGGACGACAAGACTTCGCTGGCGATCGTCATGTG
CGTCGTTTTCTTGGGGGACACAGCCCGCGGTATTTTCTTCCCGACCCTCT
GGACGAACGTGAAGAAGTTGGGGGGCAACCGCATCACCCTCGGGTACTGC
GTGGGGGCCTTCAGCCTCGGCAGGCGAGTAAGGTGCAAGCGACGCTGGAC
GACAAGACTTCGCTGGCGATCGTCATGTGCGTCGTTTTCTTGGGGGACAC
AGCCCGCGGTATTTTCTTCCCGACCCTCTGGACGAACGTGAAGAAGTTGG
GGGGCAACCGCATCACCCTCGGGTACTGCGTGGGGGCCTTCAGCCTCGGC
AGGCGAGTGGTGGTGAGCTCCCCCTACTTCGGCAACCTGTCTACGAAGCA
CGGGTACCGATCGGTCCTCTTGGTCGCCAGCAGCATCATCGCCGTGGGCG
CGTTGGCGTACGCTCTAGCTTGGGACAGAGCATCCCTCATCATTGCCCAG
ATAGTAATGGGCGTGGGCAGCGGCACCCTCGGAGTGACTAGGGCCTACGT
GGCCGACAAGTCGACCCCAGAACAGAGGACATACTTCCTGGCTTACACTA
CGGTGGTGAGCTCCCCCTACTTCGGCAACCTGTCTACGAAGCACGGGTAC
CGATCGGTCCTCTTGGTCGCCAGCAGCATCATCGCCGTGGGCGCGTTGGC
GTACGCTCTAGCTTGGGACAGAGCATCCCTCATCATTGCCCAGATAGTAA
TGGGCGTGGGCAGCGGCACCCTCGGAGTGACTAGGGCCTACGTGGCCGAC
AAGTCGACCCCAGAACAGAGGACATACTTCCTGGCTTACACTACAGCCGT
GCAGTATGCGGGCTTCACCTGCATGCCCTTCGTGGGAGGCCTTCTGTCTT
TCCTGCTCGGGTCCCGCAACATCCCGCTCATCGGGAATGCGCTGGTCCTC
AACCAGTTCACTGCCCCCGCCTTCGTTATGTGCATCGCGGCCATAGTGCT
CTTCGGACTCCTGTACTGCGTGTTCAAGGACAGCATCCCCAAGCCTAAGA
AGAAGGGAAAGCCCACGTCGACCTCTGCCGCCCTGGTGTACTCTAACGCC
TCCGCTGCCAAGTATCTCATGGGAGCGCCCTCGGATGTCTCGCTCGCGCT
GAGCAATCCGGACGGAGAGGAGGAGGAGTGGCCCCCCGCTGAGTTTCGTA
AGAACGGGGATGCGAGTAGTGGACCGACTGGGCTGTTCGTGGACTCCGAG
GACGAGGAGGAGGCGCGGAGGACTCCGGCTCACTCCGCCGCGACGAGAGA
TGTTGAACGGGGTGCGGTGACGCAGTCCGACTGCCACCGAAGCATGGACG
CGAACGGATACAGTCGAATCCAGCCTGGGGAGGAGGGAGGAGGATCAGGG
ACACCGTCCGTTGCGAACGGTCATCGGGGGTCCTCCGAAAATGGAGGCCA
TGAGGAGGAGGGGGAGGGGAGGGGGTGTCGCGATTGGTTGTGCCGATGCA
GCATGCCGAGCCTCCCCAACATGCTCATATATGGAGGGTTCCTCCTGAAC
TTGAGCACGAAGGGGACCATCGCGTGCTTCGAGACGCTGGGGGCGGAGTA
CGCGATGACGCACTTCGGCATGTCCAGCGCCGAGGCCGGGTCTGTCTTTG
CCACCTTCGGCTCGATGGGCGTCATCTCGCTGCTCTCCATGCGTGCAATC
TGCCGCTTCTACAACGACGTGCAGATCGTGCTGGGCGGCATGGTGGTGAT
GATGGTGGCCTGCATTCTCTTCATCCCTTGCCCTACAGGGGCCGCCGGCA
TACCTATGTTCCTCTGGGCGGTGTTCCTCATGTACTCCGTGGGGTACCCC
ATCGGGCATACAGCTAGCCGTGCAGTATGCGGGCTTCACCTGCATGCCCT
TCGTGGGAGGCCTTCTGTCTTTCCTGCTCGGGTCCCGCAACATCCCGCTC
ATCGGGAATGCGCTGGTCCTCAACCAGTTCACTGCCCCCGCCTTCGTTAT
GTGCATCGCGGCCATAGTGCTCTTCGGACTCCTGTACTGCGTGTTCAAGG
ACAGCATCCCCAAGCCTAAGAAGAAGGGAAAGCCCACGTCGACCTCTGCC
GCCCTGGTGTACTCTAACGCCTCCGCTGCCAAGTATCTCATGGGAGCGCC
CTCGGATGTCTCGCTCGCGCTGAGCAATCCGGACGGAGAGGAGGAGGAGT
GGCCCCCCGCTGAGTTTCGTAAGAACGGGGATGCGAGTAGTGGACCGACT
GGGCTGTTCGTGGACTCCGAGGACGAGGAGGAGGCGCGGAGGACTCCGGC
TCACTCCGCCGCGACGAGAGATGTTGAACGGGGTGCGGTGACGCAGTCCG
ACTGCCACCGAAGCATGGACGCGAACGGATACAGTCGAATCCAGCCTGGG
GAGGAGGGAGGAGGATCAGGGACACCGTCCGTTGCGAACGGTCATCGGGG
GTCCTCCGAAAATGGAGGCCATGAGGAGGAGGGGGAGGGGAGGGGGTGTC
GCGATTGGTTGTGCCGATGCAGCATGCCGAGCCTCCCCAACATGCTCATA
TATGGAGGGTTCCTCCTGAACTTGAGCACGAAGGGGACCATCGCGTGCTT
CGAGACGCTGGGGGCGGAGTACGCGATGACGCACTTCGGCATGTCCAGCG
CCGAGGCCGGGTCTGTCTTTGCCACCTTCGGCTCGATGGGCGTCATCTCG
CTGCTCTCCATGCGTGCAATCTGCCGCTTCTACAACGACGTGCAGATCGT
GCTGGGCGGCATGGTGGTGATGATGGTGGCCTGCATTCTCTTCATCCCTT
GCCCTACAGGGGCCGCCGGCATACCTATGTTCCTCTGGGCGGTGTTCCTC
ATGTACTCCGTGGGGTACCCCATCGGGCATACAGCTGTGCTGGGGCTGTT
CTCCAAGGTCGTCGGGGCGCAGCCGCAGGGCACTCTCTTGGGATGGTTTG
GCTCCTCGGGCTCTGTGGCTCGCATCGCGTTTCCAGTCATCGCCGGTGTG
CTGGGGCTGTTCTCCAAGGTCGTCGGGGCGCAGCCGCAGGGCACTCTCTT
GGGATGGTTTGGCTCCTCGGGCTCTGTGGCTCGCATCGCGTTTCCAGTCA
TCGCCGGT
back to top