mRNA_M-pyrifera_M_contig73545.17431.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig73545.17431.1 vs. uniprot
Match: A0A152A6B8_9MYCE (Uncharacterized protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A6B8_9MYCE) HSP 1 Score: 65.9 bits (159), Expect = 1.160e-9 Identity = 39/86 (45.35%), Postives = 51/86 (59.30%), Query Frame = 1 Query: 1 QLEEIVNVSSPLEDVSMSDRVEKRSRLLKLCLSDGHRTIVGIEQRPIPSLHARIPVGSKVLCRDAKLCRGVLLLHESNCKLLGGGI 258 Q+ IVN+S E D SR L+L LSDG++ IV IE R + L+ I GSK L RD + RG++LL ESN ++LGG I Sbjct: 101 QIISIVNISEDQEFRYQDDN--SHSRTLRLLLSDGYKQIVAIEHRFMSFLNHNIAPGSKALIRDVNIRRGIILLDESNMRILGGHI 184
BLAST of mRNA_M-pyrifera_M_contig73545.17431.1 vs. uniprot
Match: A0A8C5LXV2_9ANUR (RecQ-mediated genome instability protein 1 n=1 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5LXV2_9ANUR) HSP 1 Score: 65.1 bits (157), Expect = 2.220e-9 Identity = 36/95 (37.89%), Postives = 59/95 (62.11%), Query Frame = 1 Query: 1 QLEEIVNVSSPLEDVSMSDRVEKR------SRLLKLCLSDGHRTIVGIEQRPIPSLHARIPVGSKVLCRDAKLCR-GVLLLHESNCKLLGGGIKS 264 QL+++ +P E V+ + + +R +R+L + +DG I G+E RP+PSL+A IP G+K+L + +CR GVLLL N K+LGG +++ Sbjct: 101 QLQKLKGRDNPNEQVTATTQATQRPWEAKPNRMLMIQFTDGTHQIQGMEYRPLPSLNANIPPGTKILLQGTIVCRLGVLLLKSENVKVLGGEVEA 195
BLAST of mRNA_M-pyrifera_M_contig73545.17431.1 vs. uniprot
Match: UPI000644F776 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644F776) HSP 1 Score: 63.9 bits (154), Expect = 5.260e-9 Identity = 34/87 (39.08%), Postives = 54/87 (62.07%), Query Frame = 1 Query: 1 QLEEIVNVSSPLEDVSMSDRVEKRSRLLKLCLSDGHRTIVGIEQRPIPSLHARIPVGSKVLCRDAKLCRGVLLLHESNCKLLGGGIK 261 Q+ + N+S P E +DR E R+ LKL L+DG + +E + IP + ++ G+KVL RD + RG+LLL E+N ++LGG ++ Sbjct: 4 QINYVKNISQPFETRMDNDRSENRT--LKLHLTDGVHSFFAMEYQYIPFITPQLAPGTKVLVRDVPIRRGILLLDETNIRILGGSVQ 88
BLAST of mRNA_M-pyrifera_M_contig73545.17431.1 vs. uniprot
Match: A0A2I0B975_9ASPA (RecQ-mediated genome instability protein 1 n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0B975_9ASPA) HSP 1 Score: 60.5 bits (145), Expect = 9.170e-8 Identity = 34/88 (38.64%), Postives = 51/88 (57.95%), Query Frame = 1 Query: 1 QLEEIVNVSSPLEDVSMSDRVEKRSRLLKLCLSDGHRTIVGIEQRPIPSLHARIPVGSKVLCRDAKLCRGVLLLHESNCKLLGGGIKS 264 Q++EI N+SSPL + D R LKL L+DG + + G+E RP+ + P G K++ R+ K+ RG+LLL +LGG + S Sbjct: 166 QVDEIANISSPLRE-RYHDSPPGLKRCLKLSLTDGVQRVFGLEYRPVSIMENLSPAGMKIVIRNVKVRRGLLLLLPEILVVLGGMVDS 252
BLAST of mRNA_M-pyrifera_M_contig73545.17431.1 vs. uniprot
Match: F2UJ46_SALR5 (DUF1767 domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UJ46_SALR5) HSP 1 Score: 57.8 bits (138), Expect = 7.900e-7 Identity = 29/62 (46.77%), Postives = 43/62 (69.35%), Query Frame = 1 Query: 76 RLLKLCLSDGHRTIVGIEQRPIPSLHARIPVGSKVLC-RDAKLCRGVLLLHESNCKLLGGGI 258 +LLK+ L++G ++IVG+E +P+P LH G+KVL R + RG+LLL C+LLGGG+ Sbjct: 156 QLLKIKLTNGVQSIVGMELKPLPFLHREATPGTKVLVKRGTRSMRGLLLLTPDTCRLLGGGV 217
BLAST of mRNA_M-pyrifera_M_contig73545.17431.1 vs. uniprot
Match: A0A8D8F0R4_CULPI (RecQ-mediated genome instability protein 1 (Fragment) n=3 Tax=Culex pipiens TaxID=7175 RepID=A0A8D8F0R4_CULPI) HSP 1 Score: 56.6 bits (135), Expect = 1.870e-6 Identity = 29/65 (44.62%), Postives = 41/65 (63.08%), Query Frame = 1 Query: 67 KRSRLLKLCLSDGHRTIVGIEQRPIPSLHARIPVGSKVLCRDAKLC-RGVLLLHESNCKLLGGGI 258 K+ R+LKL LSDG +T+VG+E PI +L +IP G+K+L C VL L N ++LGG + Sbjct: 159 KKKRMLKLELSDGRKTVVGMEHSPIAALSTKIPPGTKLLLMGPIRCINKVLFLEPKNVRILGGEV 223
BLAST of mRNA_M-pyrifera_M_contig73545.17431.1 vs. uniprot
Match: B0WAT3_CULQU (RecQ-mediated genome instability protein 1 n=6 Tax=Culex pipiens complex TaxID=518105 RepID=B0WAT3_CULQU) HSP 1 Score: 56.6 bits (135), Expect = 2.000e-6 Identity = 29/65 (44.62%), Postives = 41/65 (63.08%), Query Frame = 1 Query: 67 KRSRLLKLCLSDGHRTIVGIEQRPIPSLHARIPVGSKVLCRDAKLC-RGVLLLHESNCKLLGGGI 258 K+ R+LKL LSDG +T+VG+E PI +L +IP G+K+L C VL L N ++LGG + Sbjct: 130 KKKRMLKLELSDGRKTVVGMEHSPIAALSTKIPPGTKMLLMGPIRCINKVLFLEPKNVRILGGEV 194
BLAST of mRNA_M-pyrifera_M_contig73545.17431.1 vs. uniprot
Match: UPI000C6DECD6 (recQ-mediated genome instability protein 1-like n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6DECD6) HSP 1 Score: 56.2 bits (134), Expect = 2.120e-6 Identity = 28/67 (41.79%), Postives = 43/67 (64.18%), Query Frame = 1 Query: 67 KRSRLLKLCLSDGHRTIVGIEQRPIPSLHARIPVGSKVLCRDAKLCR-GVLLLHESNCKLLGGGIKS 264 K +R+L L L+DG + + G+E +PIP LH ++P G+K+ CR GVL+L K+LGG ++S Sbjct: 62 KPTRMLMLTLTDGVQILKGMEYKPIPFLHTKLPSGTKISVFGPIECRLGVLILSAEKIKILGGAVES 128
BLAST of mRNA_M-pyrifera_M_contig73545.17431.1 vs. uniprot
Match: A0A1S8VQJ7_9FUNG (DUF1767 domain-containing protein n=4 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8VQJ7_9FUNG) HSP 1 Score: 56.2 bits (134), Expect = 2.600e-6 Identity = 36/106 (33.96%), Postives = 58/106 (54.72%), Query Frame = 1 Query: 4 LEEIVNVSSPLEDVSMSDRVEKRS-----------RLLKLCLSDGHRTIVGIEQRPIPSLHARIPVGSKVLCRDAKLCRGVLLLHESNCKLLGGGI-----KSDSE 273 ++E+ N S + D+ + + +K ++L+L LSDG +T +GIE PI + +G KVL + ++ RGVLLL+ SN ++LGG + KS SE Sbjct: 101 IQEVGNASQQMLDLIVERKPKKGEPHISGELVIPRKMLRLHLSDGFQTCIGIEHTPIAQIDILSLLGMKVLISNVQVRRGVLLLNASNTRVLGGSVAEMNTKSGSE 206
BLAST of mRNA_M-pyrifera_M_contig73545.17431.1 vs. uniprot
Match: UPI001FB0DAE1 (recQ-mediated genome instability protein 1 n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB0DAE1) HSP 1 Score: 56.2 bits (134), Expect = 2.690e-6 Identity = 31/84 (36.90%), Postives = 51/84 (60.71%), Query Frame = 1 Query: 1 QLEEIVNVSSPLEDVSMSDRVEKRSRLLKLCLSDGHRTIVGIEQRPIPSLHARIPVGSKVLCRDAKLCRGVLLLHESNCKLLGG 252 Q++EIVN+S L+ + R LKL ++DG R++VG+E RPI L P G KV+ R+ ++ RG+++L +++GG Sbjct: 189 QVDEIVNISIALK-TRYQNANPGAKRCLKLSITDGVRSVVGMEYRPIKDLQVFSPSGMKVIIRNVQVRRGIMMLVPEVFEVVGG 271 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig73545.17431.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig73545.17431.1 >prot_M-pyrifera_M_contig73545.17431.1 ID=prot_M-pyrifera_M_contig73545.17431.1|Name=mRNA_M-pyrifera_M_contig73545.17431.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=155bp QLEEIVNVSSPLEDVSMSDRVEKRSRLLKLCLSDGHRTIVGIEQRPIPSLback to top mRNA from alignment at M-pyrifera_M_contig73545:120..584+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig73545.17431.1 ID=mRNA_M-pyrifera_M_contig73545.17431.1|Name=mRNA_M-pyrifera_M_contig73545.17431.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=465bp|location=Sequence derived from alignment at M-pyrifera_M_contig73545:120..584+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig73545:120..584+ >mRNA_M-pyrifera_M_contig73545.17431.1 ID=mRNA_M-pyrifera_M_contig73545.17431.1|Name=mRNA_M-pyrifera_M_contig73545.17431.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=930bp|location=Sequence derived from alignment at M-pyrifera_M_contig73545:120..584+ (Macrocystis pyrifera P11B4 male)back to top |