mRNA_M-pyrifera_M_contig7353.17427.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig7353.17427.1 vs. uniprot
Match: D7G0P8_ECTSI (MFS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0P8_ECTSI) HSP 1 Score: 278 bits (712), Expect = 2.020e-88 Identity = 150/200 (75.00%), Postives = 171/200 (85.50%), Query Frame = 1 Query: 28 RVKLLTIGCSLMFVALIILAVSFLFDYVSEEDCNDYTLESSCNAYSDKCEWDSSCSXXXXXXXXXXXXIACTCCGVTGLDLQKGFILGAMFLYIGGYQVGFGPVVWLIISEIFPLDVSRGKAISVAVVANFTWNLLVTLVFPTELDILGSALTFGIFAVIDGYALYFIRSKVPETKGLSLEQIEALFMRRGQRDEREALS 627 RVKLL IGC LM +ALI L ++F+FDYVSEEDCNDYT +S+C+AYSDKCEWD+SC+ XXXXXXXX CTCCGV GLD QK IL AMF+YIGGYQVGFGPVVWLIISEIFPLDV RGKAISVAVV NF +NLLVT +FPT L+ LGS+ TF IFAV D Y+LYFI+++VPETKGLSLEQIEALF+RRGQR+ R AL+ Sbjct: 325 RVKLLNIGCMLMLLALIALTIAFMFDYVSEEDCNDYTTDSTCSAYSDKCEWDTSCTCDSTXXXXXXXXXGCTCCGVAGLDTQKACILAAMFVYIGGYQVGFGPVVWLIISEIFPLDV-RGKAISVAVVVNFGFNLLVTFIFPTMLEDLGSSWTFAIFAVADAYSLYFIKTRVPETKGLSLEQIEALFLRRGQRNTRAALA 523
BLAST of mRNA_M-pyrifera_M_contig7353.17427.1 vs. uniprot
Match: A0A836CC74_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC74_9STRA) HSP 1 Score: 218 bits (555), Expect = 4.510e-65 Identity = 115/189 (60.85%), Postives = 144/189 (76.19%), Query Frame = 1 Query: 28 RVKLLTIGCSLMFVALIILAVSFLFDYVSEEDCNDYTLESSCNAYSDKCEWDSSCSXXXXXXXXXXXXIACTCCGVTGLDLQKGFILGAMFLYIGGYQVGFGPVVWLIISEIFPLDVSRGKAISVAVVANFTWNLLVTLVFPTELDILGSALTFGIFAVIDGYALYFIRSKVPETKGLSLEQIEALFMR 594 R LL++GC +M +AL+ L ++F FDYVS E+CN+YT +SC ++ KCE+ S C ACTCC V GLD QK IL AMF+YIGGYQVGFGP+VWL+ISE+FPL++ RGKAISVAVVANFT NLLVT +FP E+D++G++ TF IFAVID YAL+FI ++VPETKGL+LEQIE LF R Sbjct: 321 RKTLLSVGCWMMLIALVALGITFFFDYVSSEECNEYTDATSCANFNSKCEFASDCVCDDTDSGSD----ACTCCSVGGLDAQKIVILIAMFVYIGGYQVGFGPIVWLLISELFPLEL-RGKAISVAVVANFTSNLLVTFLFPVEMDLIGTSWTFLIFAVIDLYALWFIYTRVPETKGLTLEQIEHLFQR 504
BLAST of mRNA_M-pyrifera_M_contig7353.17427.1 vs. uniprot
Match: A0A835ZBD5_9STRA (General substrate transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBD5_9STRA) HSP 1 Score: 206 bits (523), Expect = 2.890e-60 Identity = 114/193 (59.07%), Postives = 135/193 (69.95%), Query Frame = 1 Query: 28 RVKLLTIGCSLMFVALIILAVSFLFDYVSEEDCNDYTLESS--CNAYSDKCEWDSSCSXXXXXXXXXXXXIACTCCGVTGLDLQKGFILGAMFLYIGGYQVGFGPVVWLIISEIFPLDVSRGKAISVAVVANFTWNLLVTLVFPTELDILGSALTFGIFAVIDGYALYFIRSKVPETKGLSLEQIEALFMRRG 600 R LL +GC LM AL++L+ +F FDYVS EDC+ T E+S C A+SDKC + C+ C CC G D QKGFIL AMFLYIGGYQ GFGP+ W +ISEIFPL++ RGKAISVAVVANF NLLVT FP E+D++G + TF IFA +D YALYFI ++VPETKGLSLE IEALF R G Sbjct: 326 RKTLLRLGCWLMLAALLMLSAAFAFDYVSSEDCSQNTDEASASCAAFSDKCAFIPGCTCDTASAAADD----CACCTGAGFDAQKGFILAAMFLYIGGYQAGFGPITWCLISEIFPLEL-RGKAISVAVVANFASNLLVTFFFPLEMDLIGVSATFLIFAALDIYALYFIATRVPETKGLSLEAIEALFQRIG 513
BLAST of mRNA_M-pyrifera_M_contig7353.17427.1 vs. uniprot
Match: A0A7S2UXZ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXZ9_9STRA) HSP 1 Score: 161 bits (408), Expect = 1.490e-43 Identity = 90/168 (53.57%), Postives = 111/168 (66.07%), Query Frame = 1 Query: 28 RVKLLTIGCSLMFVALIILAVSFLFDYVSEEDCNDYTLESSCNAYSDKCEWDSSCSXXXXXXXXXXXXIACTCCGVTGLDLQKGFILGAMFLYIGGYQVGFGPVVWLIISEIFPLDVSRGKAISVAVVANFTWNLLVTLVFPTELDILGSALTFGIFAVIDGYALYFI 531 R KLL IGC +M VAL++LAV F F Y S + C T SC S CEW CGVTGLD QK ILGAMFLYIGGYQVGFGP+ WLIISE+FPL++ RGKAISVAVV+NF W + + +FP +L++ G+++TF +FA+ID YA+YFI Sbjct: 353 RKKLLYIGCVMMLVALLLLAVCFAFPYTSYDQCEAMTEADSCGDLSG-CEWSEDA------------------CGVTGLDGQKVTILGAMFLYIGGYQVGFGPIAWLIISEVFPLEL-RGKAISVAVVSNFFWMTVESFLFPVQLELFGASVTFFVFALIDAYAIYFI 500
BLAST of mRNA_M-pyrifera_M_contig7353.17427.1 vs. uniprot
Match: A0A7S0SS38_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SS38_9STRA) HSP 1 Score: 148 bits (373), Expect = 3.390e-42 Identity = 70/132 (53.03%), Postives = 98/132 (74.24%), Query Frame = 1 Query: 172 CEWDSSCSXXXXXXXXXXXXIACTCCGVTGLDLQKGFILGAMFLYIGGYQVGFGPVVWLIISEIFPLDVSRGKAISVAVVANFTWNLLVTLVFPTELDILGSALTFGIFAVIDGYALYFIRSKVPETKGLSL 567 C WD+ C+ CTCCG++G++ QK IL A+F+YIGGYQ+GFGP+ WL+ISEIFPL+V RGKA+S+AVV NF WN ++T +FP EL+++G +LTF I+A+I +++ FI +VPETKGL+L Sbjct: 8 CVWDAGCASECSAETDDYL---CTCCGISGINFQKSVILTALFIYIGGYQIGFGPISWLLISEIFPLEV-RGKAVSIAVVTNFFWNTIMTFIFPIELNLIGQSLTFFIYAIILIFSINFIYHRVPETKGLTL 135
BLAST of mRNA_M-pyrifera_M_contig7353.17427.1 vs. uniprot
Match: A0A7S3DPE6_9STRA (Hypothetical protein n=2 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DPE6_9STRA) HSP 1 Score: 127 bits (319), Expect = 1.310e-30 Identity = 69/120 (57.50%), Postives = 89/120 (74.17%), Query Frame = 1 Query: 262 LDLQKGFILGAMFLYIGGYQVGFGPVVWLIISEIFPLDVSRGKAISVAVVANFTWNLLVTLVFPTELDILGSALTFGIFAVIDGYALYFIRSKVPETKGLSLEQIEALF--MRRGQ-RDE 612 ++L KG +LGA+FLYIGGYQVGFGP+ WL+ SE+FPL + RG+A+++AV NF +N V P +G + TFGIFA++D Y+LYFIR+ VPETKGLSLE+IE F M RG RDE Sbjct: 398 VELPKGLVLGALFLYIGGYQVGFGPITWLMTSEVFPLAI-RGQAVALAVQFNFLFNAAVQFGVPVLQQAVGLSWTFGIFALLDLYSLYFIRTFVPETKGLSLEEIEEKFGRMTRGSSRDE 516
BLAST of mRNA_M-pyrifera_M_contig7353.17427.1 vs. uniprot
Match: A0A7S2BYB2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BYB2_9STRA) HSP 1 Score: 119 bits (298), Expect = 7.020e-30 Identity = 64/117 (54.70%), Postives = 82/117 (70.09%), Query Frame = 1 Query: 262 LDLQKGFILGAMFLYIGGYQVGFGPVVWLIISEIFPLDVSRGKAISVAVVANFTWNLLVTLVFPTELDILGSALT--------FGIFAVIDGYALYFIRSKVPETKGLSLEQIEALF 588 LD + I+ MF YIGGYQ+GFGP+ WL+ISE+FPL+V RG+A++ AV NF WNL+V+L++P +D G+A FGIFAV+ YAL FI VPETKGLSLE+IE F Sbjct: 74 LDWRTVTIIIGMFAYIGGYQLGFGPIAWLLISEVFPLEV-RGQAVAFAVQNNFAWNLVVSLLYPVLIDSFGTAFGDEYKYCAGFGIFAVLTLYALVFIYRNVPETKGLSLEEIERKF 189
BLAST of mRNA_M-pyrifera_M_contig7353.17427.1 vs. uniprot
Match: F0Y6Q9_AURAN (General sugar transporter n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6Q9_AURAN) HSP 1 Score: 121 bits (303), Expect = 1.500e-28 Identity = 64/115 (55.65%), Postives = 85/115 (73.91%), Query Frame = 1 Query: 259 GLDLQKGFILGAMFLYIGGYQVGFGPVVWLIISEIFPLDVSRGKAISVAVVANFTWNLLVTLVFPTELD----ILGSA----LTFGIFAVIDGYALYFIRSKVPETKGLSLEQIE 579 G QKG I+G +F+YI GYQVGFGP+ WL+ISE+FPL+V RG+A+++AV ANF N+LV+ +FP +LGS + FGIFAV+D YAL+FI VPETKG++LE+IE Sbjct: 361 GFSAQKGAIVGLIFVYIAGYQVGFGPIAWLLISEVFPLEV-RGQAVALAVQANFASNMLVSFLFPVAQTGLKALLGSTWYLTVLFGIFAVLDLYALHFINRNVPETKGMTLEEIE 474
BLAST of mRNA_M-pyrifera_M_contig7353.17427.1 vs. uniprot
Match: A0A7S1UI73_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UI73_9STRA) HSP 1 Score: 120 bits (302), Expect = 2.630e-28 Identity = 62/110 (56.36%), Postives = 81/110 (73.64%), Query Frame = 1 Query: 259 GLDLQKGFILGAMFLYIGGYQVGFGPVVWLIISEIFPLDVSRGKAISVAVVANFTWNLLVTLVFPTELDILGSALTFGIFAVIDGYALYFIRSKVPETKGLSLEQIEALF 588 GL+ QK IL + YIGGYQVGFGPV W +ISE+FPL+V RG+A+++AV NF NL+VT +F ELD +GS LTF +FA I +++F+ VPETKGL+LE+IE F Sbjct: 384 GLNAQKIVILTCLLAYIGGYQVGFGPVAWTLISEVFPLEV-RGQAVALAVQVNFFLNLVVTFLFLIELDAIGSTLTFAVFAGILAGSVFFVYKYVPETKGLTLEEIETFF 492
BLAST of mRNA_M-pyrifera_M_contig7353.17427.1 vs. uniprot
Match: A0A7S2FR46_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FR46_9STRA) HSP 1 Score: 119 bits (298), Expect = 9.090e-28 Identity = 64/117 (54.70%), Postives = 82/117 (70.09%), Query Frame = 1 Query: 262 LDLQKGFILGAMFLYIGGYQVGFGPVVWLIISEIFPLDVSRGKAISVAVVANFTWNLLVTLVFPTELDILGSALT--------FGIFAVIDGYALYFIRSKVPETKGLSLEQIEALF 588 LD + I+ MF YIGGYQ+GFGP+ WL+ISE+FPL+V RG+A++ AV NF WNL+V+L++P +D G+A FGIFAV+ YAL FI VPETKGLSLE+IE F Sbjct: 377 LDWRTVTIIIGMFAYIGGYQLGFGPIAWLLISEVFPLEV-RGQAVAFAVQNNFAWNLVVSLLYPVLIDSFGTAFGDEYKYCAGFGIFAVLTLYALVFIYRNVPETKGLSLEEIERKF 492 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7353.17427.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7353.17427.1 >prot_M-pyrifera_M_contig7353.17427.1 ID=prot_M-pyrifera_M_contig7353.17427.1|Name=mRNA_M-pyrifera_M_contig7353.17427.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=212bp MLHGCFPVCRVKLLTIGCSLMFVALIILAVSFLFDYVSEEDCNDYTLESSback to top mRNA from alignment at M-pyrifera_M_contig7353:166..4292+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig7353.17427.1 ID=mRNA_M-pyrifera_M_contig7353.17427.1|Name=mRNA_M-pyrifera_M_contig7353.17427.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4127bp|location=Sequence derived from alignment at M-pyrifera_M_contig7353:166..4292+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig7353:166..4292+ >mRNA_M-pyrifera_M_contig7353.17427.1 ID=mRNA_M-pyrifera_M_contig7353.17427.1|Name=mRNA_M-pyrifera_M_contig7353.17427.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1272bp|location=Sequence derived from alignment at M-pyrifera_M_contig7353:166..4292+ (Macrocystis pyrifera P11B4 male)back to top |