mRNA_M-pyrifera_M_contig100818.174.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig100818.174.1
Unique NamemRNA_M-pyrifera_M_contig100818.174.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig100818.174.1 vs. uniprot
Match: UPI000CE1795A (serine/threonine-protein phosphatase PP-X isozyme 2-like n=1 Tax=Quercus suber TaxID=58331 RepID=UPI000CE1795A)

HSP 1 Score: 271 bits (692), Expect = 2.730e-91
Identity = 130/148 (87.84%), Postives = 139/148 (93.92%), Query Frame = 1 
Query:    1 DRMIERLMRCEILKEAEVKELCNKAREILVDESNVQRVDAPVTICGDIHGQFFDLKELLQVGGECPKTNYLFLGDFVDRGFYSVETILLLLALKVRYPDRITLIRGNHESRQTTQVYGFYDECLRKYGSVNVWRYCTDLFDYLSISAL 444
            DR IE+L +CE LKE+EVK LC KA EILV+ESNVQRVDAPVTICGDIHGQF+DLKEL +VGG+CPKTNYLFLGDFVDRGFYSVET LLLLALKVRYPDRITLIRGNHESRQ TQVYGFYDECLRKYGSVNVWRYCTD+FDYLS+SAL
Sbjct:    5 DRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDLKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSAL 152
[Close]
BLAST of mRNA_M-pyrifera_M_contig100818.174.1 vs. uniprot
Match: A0A067CKX2_SAPPC (Serine/threonine-protein phosphatase n=7 Tax=Oomycota TaxID=4762 RepID=A0A067CKX2_SAPPC)

HSP 1 Score: 273 bits (699), Expect = 7.550e-91
Identity = 129/148 (87.16%), Postives = 139/148 (93.92%), Query Frame = 1 
Query:    1 DRMIERLMRCEILKEAEVKELCNKAREILVDESNVQRVDAPVTICGDIHGQFFDLKELLQVGGECPKTNYLFLGDFVDRGFYSVETILLLLALKVRYPDRITLIRGNHESRQTTQVYGFYDECLRKYGSVNVWRYCTDLFDYLSISAL 444
            DR IE+L RCE LKE+EVK LC KAREILVDESNVQR+DAPVTICGDIHGQF+DLKEL  VGGECP+TNYLF+GDFVDRGFYSVET LLLLALKVRYPDRITLIRGNHESRQ TQVYGFYDECLRKYGSVNVWRYCT++FDYLS+SA+
Sbjct:   25 DRQIEQLKRCEYLKESEVKALCQKAREILVDESNVQRIDAPVTICGDIHGQFYDLKELFNVGGECPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTEIFDYLSLSAI 172
[Close]
BLAST of mRNA_M-pyrifera_M_contig100818.174.1 vs. uniprot
Match: UPI0009014D97 (serine/threonine-protein phosphatase PP-X isozyme 2 isoform X2 n=1 Tax=Camelina sativa TaxID=90675 RepID=UPI0009014D97)

HSP 1 Score: 270 bits (689), Expect = 1.030e-90
Identity = 129/148 (87.16%), Postives = 139/148 (93.92%), Query Frame = 1 
Query:    1 DRMIERLMRCEILKEAEVKELCNKAREILVDESNVQRVDAPVTICGDIHGQFFDLKELLQVGGECPKTNYLFLGDFVDRGFYSVETILLLLALKVRYPDRITLIRGNHESRQTTQVYGFYDECLRKYGSVNVWRYCTDLFDYLSISAL 444
            D+ IE+L RCE LKE+EVK LC KA EILV+ESNVQRVDAPVTICGDIHGQF+D+KEL +VGG+CPKTNYLFLGDFVDRGFYSVET LLLLALKVRYPDRITLIRGNHESRQ TQVYGFYDECLRKYGSVNVWRYCTD+FDYLS+SAL
Sbjct:    5 DQQIEQLKRCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSAL 152
[Close]
BLAST of mRNA_M-pyrifera_M_contig100818.174.1 vs. uniprot
Match: A0A024GSC0_9STRA (Serine/threonine-protein phosphatase n=2 Tax=Albugo TaxID=65356 RepID=A0A024GSC0_9STRA)

HSP 1 Score: 273 bits (699), Expect = 2.600e-90
Identity = 129/148 (87.16%), Postives = 139/148 (93.92%), Query Frame = 1 
Query:    1 DRMIERLMRCEILKEAEVKELCNKAREILVDESNVQRVDAPVTICGDIHGQFFDLKELLQVGGECPKTNYLFLGDFVDRGFYSVETILLLLALKVRYPDRITLIRGNHESRQTTQVYGFYDECLRKYGSVNVWRYCTDLFDYLSISAL 444
            DR IE+L RCE LKE+EVK LC KAREILVDESNVQR+DAPVTICGDIHGQF+DLKEL  VGGECP+TNYLF+GDFVDRGFYSVET LLLLALKVRYPDRITLIRGNHESRQ TQVYGFYDECLRKYGSVNVWRYCT++FDYLS+SA+
Sbjct:    9 DRQIEQLKRCEYLKESEVKALCQKAREILVDESNVQRIDAPVTICGDIHGQFYDLKELFSVGGECPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTEIFDYLSLSAI 156
[Close]
BLAST of mRNA_M-pyrifera_M_contig100818.174.1 vs. uniprot
Match: B7FFE7_MEDTR (Serine/threonine-protein phosphatase (Fragment) n=1 Tax=Medicago truncatula TaxID=3880 RepID=B7FFE7_MEDTR)

HSP 1 Score: 268 bits (684), Expect = 2.620e-90
Identity = 128/147 (87.07%), Postives = 138/147 (93.88%), Query Frame = 1 
Query:    1 DRMIERLMRCEILKEAEVKELCNKAREILVDESNVQRVDAPVTICGDIHGQFFDLKELLQVGGECPKTNYLFLGDFVDRGFYSVETILLLLALKVRYPDRITLIRGNHESRQTTQVYGFYDECLRKYGSVNVWRYCTDLFDYLSISA 441
            DR IE+L RCE LKE+EVK LC KA EILV+ESNVQRVDAPVTICGDIHGQF+D+KEL +VGG+CPKTNYLFLGDFVDRGFYSVET LLLLALKVRYPDRITLIRGNHESRQ TQVYGFYDECL+KYGSVNVWRYCTD+FDYLS+SA
Sbjct:    5 DRQIEQLKRCEPLKESEVKSLCLKAIEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLQKYGSVNVWRYCTDIFDYLSLSA 151
[Close]
BLAST of mRNA_M-pyrifera_M_contig100818.174.1 vs. uniprot
Match: A0A453KJU4_AEGTS (Serine/threonine-protein phosphatase n=3 Tax=Mesangiospermae TaxID=1437183 RepID=A0A453KJU4_AEGTS)

HSP 1 Score: 268 bits (686), Expect = 3.260e-90
Identity = 129/148 (87.16%), Postives = 138/148 (93.24%), Query Frame = 1 
Query:    1 DRMIERLMRCEILKEAEVKELCNKAREILVDESNVQRVDAPVTICGDIHGQFFDLKELLQVGGECPKTNYLFLGDFVDRGFYSVETILLLLALKVRYPDRITLIRGNHESRQTTQVYGFYDECLRKYGSVNVWRYCTDLFDYLSISAL 444
            DR IE+L RCE L EAEVK LC KA EILV+ESNVQRVDAPVTICGDIHGQF+D+KEL +VGG+CPKTNYLFLGDFVDRGFYSVET LLLLALKVRYPDRITLIRGNHESRQ TQVYGFYDECLRKYGSVNVWRYCT++FDYLS+SAL
Sbjct:    7 DRQIEQLKRCEPLAEAEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTEIFDYLSLSAL 154
[Close]
BLAST of mRNA_M-pyrifera_M_contig100818.174.1 vs. uniprot
Match: A0A024TIH8_9STRA (Serine/threonine-protein phosphatase n=27 Tax=Oomycota TaxID=4762 RepID=A0A024TIH8_9STRA)

HSP 1 Score: 273 bits (699), Expect = 4.070e-90
Identity = 129/148 (87.16%), Postives = 139/148 (93.92%), Query Frame = 1 
Query:    1 DRMIERLMRCEILKEAEVKELCNKAREILVDESNVQRVDAPVTICGDIHGQFFDLKELLQVGGECPKTNYLFLGDFVDRGFYSVETILLLLALKVRYPDRITLIRGNHESRQTTQVYGFYDECLRKYGSVNVWRYCTDLFDYLSISAL 444
            DR IE+L RCE LKE+EVK LC KAREILVDESNVQR+DAPVTICGDIHGQF+DLKEL  VGGECP+TNYLF+GDFVDRGFYSVET LLLLALKVRYPDRITLIRGNHESRQ TQVYGFYDECLRKYGSVNVWRYCT++FDYLS+SA+
Sbjct:   23 DRQIEQLKRCEYLKESEVKALCQKAREILVDESNVQRIDAPVTICGDIHGQFYDLKELFNVGGECPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTEIFDYLSLSAI 170
[Close]
BLAST of mRNA_M-pyrifera_M_contig100818.174.1 vs. uniprot
Match: UPI0009BF9DB4 (serine/threonine-protein phosphatase PP-X isozyme 2 isoform X3 n=2 Tax=Magnoliopsida TaxID=3398 RepID=UPI0009BF9DB4)

HSP 1 Score: 268 bits (686), Expect = 4.900e-90
Identity = 129/148 (87.16%), Postives = 138/148 (93.24%), Query Frame = 1 
Query:    1 DRMIERLMRCEILKEAEVKELCNKAREILVDESNVQRVDAPVTICGDIHGQFFDLKELLQVGGECPKTNYLFLGDFVDRGFYSVETILLLLALKVRYPDRITLIRGNHESRQTTQVYGFYDECLRKYGSVNVWRYCTDLFDYLSISAL 444
            DR IE+L RCE LKE EVK LC KA EILV+ESNVQRVDAPVTICGDIHGQF+D+KEL +VGG+CP+TNYLFLGDFVDRGFYSVET LLLLALKVRYPDRITLIRGNHESRQ TQVYGFYDECLRKYGSVNVWRYCTD+FDYLS+SAL
Sbjct:    5 DRQIEQLKRCEPLKEYEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPQTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSAL 152
[Close]
BLAST of mRNA_M-pyrifera_M_contig100818.174.1 vs. uniprot
Match: A0A1S8W1G0_9FUNG (Serine/threonine-protein phosphatase n=1 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8W1G0_9FUNG)

HSP 1 Score: 273 bits (698), Expect = 8.990e-90
Identity = 125/148 (84.46%), Postives = 142/148 (95.95%), Query Frame = 1 
Query:    1 DRMIERLMRCEILKEAEVKELCNKAREILVDESNVQRVDAPVTICGDIHGQFFDLKELLQVGGECPKTNYLFLGDFVDRGFYSVETILLLLALKVRYPDRITLIRGNHESRQTTQVYGFYDECLRKYGSVNVWRYCTDLFDYLSISAL 444
            DR +E+L+RCE++KE+EVKE+CNKAREIL++ESNVQRVDAPVTICGDIHGQF+DLKELL+VGG+CP TNYLF+GDFVDRGFYSVET LLLL LKVRYPDRITLIRGNHESRQ TQVYGFYDECLRKYGSVNVWRYC ++FDYLS+SA+
Sbjct:   37 DRQVEQLLRCEVIKESEVKEICNKAREILIEESNVQRVDAPVTICGDIHGQFYDLKELLKVGGKCPDTNYLFMGDFVDRGFYSVETFLLLLVLKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCCEIFDYLSLSAI 184
[Close]
BLAST of mRNA_M-pyrifera_M_contig100818.174.1 vs. uniprot
Match: A0A199VI70_ANACO (Serine/threonine-protein phosphatase n=5 Tax=Mesangiospermae TaxID=1437183 RepID=A0A199VI70_ANACO)

HSP 1 Score: 271 bits (693), Expect = 1.230e-89
Identity = 130/148 (87.84%), Postives = 139/148 (93.92%), Query Frame = 1 
Query:    1 DRMIERLMRCEILKEAEVKELCNKAREILVDESNVQRVDAPVTICGDIHGQFFDLKELLQVGGECPKTNYLFLGDFVDRGFYSVETILLLLALKVRYPDRITLIRGNHESRQTTQVYGFYDECLRKYGSVNVWRYCTDLFDYLSISAL 444
            DR IE+L RCE LKE+EVK LC KA EILV+ESNVQRVDAPVTICGDIHGQF+D+KEL +VGG+CPKTNYLFLGDFVDRGFYSVET LLLLALKVRYPDRITLIRGNHESRQ TQVYGFYDECLRKYGSVNVWRYCTD+FDYLS+SAL
Sbjct:    5 DRQIEQLKRCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSAL 152
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100818.174.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000CE1795A2.730e-9187.84serine/threonine-protein phosphatase PP-X isozyme ... [more]
A0A067CKX2_SAPPC7.550e-9187.16Serine/threonine-protein phosphatase n=7 Tax=Oomyc... [more]
UPI0009014D971.030e-9087.16serine/threonine-protein phosphatase PP-X isozyme ... [more]
A0A024GSC0_9STRA2.600e-9087.16Serine/threonine-protein phosphatase n=2 Tax=Albug... [more]
B7FFE7_MEDTR2.620e-9087.07Serine/threonine-protein phosphatase (Fragment) n=... [more]
A0A453KJU4_AEGTS3.260e-9087.16Serine/threonine-protein phosphatase n=3 Tax=Mesan... [more]
A0A024TIH8_9STRA4.070e-9087.16Serine/threonine-protein phosphatase n=27 Tax=Oomy... [more]
UPI0009BF9DB44.900e-9087.16serine/threonine-protein phosphatase PP-X isozyme ... [more]
A0A1S8W1G0_9FUNG8.990e-9084.46Serine/threonine-protein phosphatase n=1 Tax=Batra... [more]
A0A199VI70_ANACO1.230e-8987.84Serine/threonine-protein phosphatase n=5 Tax=Mesan... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig100818contigM-pyrifera_M_contig100818:1..675 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score275.4
Seed ortholog evalue1.5e-71
Seed eggNOG ortholog109871.XP_006679735.1
Preferred namePPH3
KEGG koko:K15423
KEGG Pathwayko04922,map04922
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000075,GO:0000724,GO:0000725,GO:0003674,GO:0003824,GO:0004721,GO:0004722,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006282,GO:0006302,GO:0006310,GO:0006464,GO:0006470,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0007049,GO:0007063,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008287,GO:0009893,GO:0009966,GO:0009968,GO:0009987,GO:0010564,GO:0010604,GO:0010639,GO:0010646,GO:0010648,GO:0010948,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019219,GO:0019222,GO:0019538,GO:0022402,GO:0022414,GO:0023051,GO:0023052,GO:0023057,GO:0030289,GO:0031323,GO:0031325,GO:0031974,GO:0031981,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033046,GO:0033313,GO:0033554,GO:0034399,GO:0034641,GO:0035556,GO:0036211,GO:0040020,GO:0042578,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045739,GO:0045786,GO:0045787,GO:0045835,GO:0045875,GO:0045935,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051128,GO:0051129,GO:0051171,GO:0051173,GO:0051321,GO:0051445,GO:0051447,GO:0051598,GO:0051716,GO:0051726,GO:0051783,GO:0051784,GO:0051983,GO:0051985,GO:0060255,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0072395,GO:0072411,GO:0072462,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0140096,GO:1901360,GO:1901564,GO:1901976,GO:1901977,GO:1902494,GO:1902659,GO:1902660,GO:1903046,GO:1903293,GO:2000001,GO:2000002,GO:2000241,GO:2000242,GO:2000779,GO:2000781,GO:2001020,GO:2001021,GO:2001022,GO:2001032,GO:2001034,GO:2001251
EggNOG free text desc.serine threonine-protein phosphatase
EggNOG OGs38D1F@33154,3NVGA@4751,COG0639@1,KOG0372@2759
EC3.1.3.16
COG Functional cat.GT
Best tax levelFungi
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01009,ko03400
Exons4
Model size444
Cds size438
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig100818.174.1prot_M-pyrifera_M_contig100818.174.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig100818 7..675 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815505.1080022-UTR-M-pyrifera_M_contig100818:0..61622815505.1080022-UTR-M-pyrifera_M_contig100818:0..6Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig100818 1..6 +
1692277441.5020666-UTR-M-pyrifera_M_contig100818:0..61692277441.5020666-UTR-M-pyrifera_M_contig100818:0..6Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig100818 1..6 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815505.120387-CDS-M-pyrifera_M_contig100818:6..1291622815505.120387-CDS-M-pyrifera_M_contig100818:6..129Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100818 7..129 +
1692277441.512066-CDS-M-pyrifera_M_contig100818:6..1291692277441.512066-CDS-M-pyrifera_M_contig100818:6..129Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100818 7..129 +
1622815505.1332297-CDS-M-pyrifera_M_contig100818:225..3781622815505.1332297-CDS-M-pyrifera_M_contig100818:225..378Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100818 226..378 +
1692277441.5197847-CDS-M-pyrifera_M_contig100818:225..3781692277441.5197847-CDS-M-pyrifera_M_contig100818:225..378Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100818 226..378 +
1622815505.1438763-CDS-M-pyrifera_M_contig100818:434..4991622815505.1438763-CDS-M-pyrifera_M_contig100818:434..499Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100818 435..499 +
1692277441.527561-CDS-M-pyrifera_M_contig100818:434..4991692277441.527561-CDS-M-pyrifera_M_contig100818:434..499Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100818 435..499 +
1622815505.1559842-CDS-M-pyrifera_M_contig100818:578..6751622815505.1559842-CDS-M-pyrifera_M_contig100818:578..675Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100818 579..675 +
1692277441.5362515-CDS-M-pyrifera_M_contig100818:578..6751692277441.5362515-CDS-M-pyrifera_M_contig100818:578..675Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100818 579..675 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig100818.174.1

>prot_M-pyrifera_M_contig100818.174.1 ID=prot_M-pyrifera_M_contig100818.174.1|Name=mRNA_M-pyrifera_M_contig100818.174.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=146bp
MIERLMRCEILKEAEVKELCNKAREILVDESNVQRVDAPVTICGDIHGQF
FDLKELLQVGGECPKTNYLFLGDFVDRGFYSVETILLLLALKVRYPDRIT
LIRGNHESRQTTQVYGFYDECLRKYGSVNVWRYCTDLFDYLSISAL
back to top

mRNA from alignment at M-pyrifera_M_contig100818:1..675+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig100818.174.1 ID=mRNA_M-pyrifera_M_contig100818.174.1|Name=mRNA_M-pyrifera_M_contig100818.174.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=675bp|location=Sequence derived from alignment at M-pyrifera_M_contig100818:1..675+ (Macrocystis pyrifera P11B4 male)
GATCGCATGATTGAGAGGTTGATGCGGTGCGAGATCTTGAAGGAGGCAGA
GGTGAAGGAGCTGTGCAACAAGGCACGCGAGATCCTGGTGGACGAGAGCA
ACGTCCAGCGCGTGGACGCACCCGTGACTGTGCGTATCGCCGCGCGCGCA
GGCTTCTGGCCACCAACTGCAGGGTGTGGATATGCGCATAGGGCGTGTGC
ATGCTGACGCCGTGCGCGTGCGCAGATCTGCGGTGACATCCACGGCCAGT
TCTTCGACTTGAAGGAGCTGCTGCAGGTGGGCGGCGAGTGCCCGAAGACC
AACTACCTGTTCCTCGGAGACTTTGTCGACCGCGGCTTCTACTCCGTGGA
GACCATCCTCCTCCTGCTGGCCCTCAAGGTGGGCACCTCGCCACCTCGTG
CTTGCTGCAGCGCGCTGACACGCAGCCTGCCCAGGTCCGCTATCCCGACA
GAATAACTTTGATCCGTGGCAACCATGAGAGCCGTCAGACCACTCAAGTG
TACGCAAATCGCACTAGCGCCCATGTGGGCAGGCGCGCACACCCGCTCAC
CCCGCGTGCACACTCGTTCTTGTCGCAGCTACGGCTTCTACGACGAGTGC
CTGCGCAAGTACGGCAGCGTGAACGTGTGGAGGTACTGCACCGACCTGTT
CGACTACCTCTCCATCTCTGCGCTC
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig100818:1..675+

>mRNA_M-pyrifera_M_contig100818.174.1 ID=mRNA_M-pyrifera_M_contig100818.174.1|Name=mRNA_M-pyrifera_M_contig100818.174.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=876bp|location=Sequence derived from alignment at M-pyrifera_M_contig100818:1..675+ (Macrocystis pyrifera P11B4 male)
ATGATTGAGAGGTTGATGCGGTGCGAGATCTTGAAGGAGGCAGAGGTGAA
GGAGCTGTGCAACAAGGCACGCGAGATCCTGGTGGACGAGAGCAACGTCC
AGCGCGTGGACGCACCCGTGACTATGATTGAGAGGTTGATGCGGTGCGAG
ATCTTGAAGGAGGCAGAGGTGAAGGAGCTGTGCAACAAGGCACGCGAGAT
CCTGGTGGACGAGAGCAACGTCCAGCGCGTGGACGCACCCGTGACTATCT
GCGGTGACATCCACGGCCAGTTCTTCGACTTGAAGGAGCTGCTGCAGGTG
GGCGGCGAGTGCCCGAAGACCAACTACCTGTTCCTCGGAGACTTTGTCGA
CCGCGGCTTCTACTCCGTGGAGACCATCCTCCTCCTGCTGGCCCTCAAGA
TCTGCGGTGACATCCACGGCCAGTTCTTCGACTTGAAGGAGCTGCTGCAG
GTGGGCGGCGAGTGCCCGAAGACCAACTACCTGTTCCTCGGAGACTTTGT
CGACCGCGGCTTCTACTCCGTGGAGACCATCCTCCTCCTGCTGGCCCTCA
AGGTCCGCTATCCCGACAGAATAACTTTGATCCGTGGCAACCATGAGAGC
CGTCAGACCACTCAAGTGTCCGCTATCCCGACAGAATAACTTTGATCCGT
GGCAACCATGAGAGCCGTCAGACCACTCAAGTCTACGGCTTCTACGACGA
GTGCCTGCGCAAGTACGGCAGCGTGAACGTGTGGAGGTACTGCACCGACC
TGTTCGACTACCTCTCCATCTCTGCGCTCCTACGGCTTCTACGACGAGTG
CCTGCGCAAGTACGGCAGCGTGAACGTGTGGAGGTACTGCACCGACCTGT
TCGACTACCTCTCCATCTCTGCGCTC
back to top