prot_M-pyrifera_M_contig73343.17396.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig73343.17396.1
Unique Nameprot_M-pyrifera_M_contig73343.17396.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length141
Homology
BLAST of mRNA_M-pyrifera_M_contig73343.17396.1 vs. uniprot
Match: A0A348AL84_9FIRM (Corrinoid ABC transporter substrate-binding protein n=1 Tax=Methylomusa anaerophila TaxID=1930071 RepID=A0A348AL84_9FIRM)

HSP 1 Score: 59.3 bits (142), Expect = 1.310e-7
Identity = 33/99 (33.33%), Postives = 53/99 (53.54%), Query Frame = 0
Query:   43 ERIIGLPSAFDEYINVTLPAELLDPDRRFPEFNAELLLALDPDLIIAGSWIPAESVEHLTSAGVDVYVMPTVTDLDHIRAAIRDVGARLGVEARAAELL 141
            ER++ L    D+    T+ AE      R  E+NAE +L+L PDL+IA  W   E ++ L   G+ V+V    + +  ++ AIR++   +G EA  + LL
Sbjct:   96 ERVVALHYLADDPGISTIAAEAGRVPVRLQEYNAEQILSLQPDLVIAPDWSRIELIQTLRDMGIPVFVSKGPSSVAEVKQAIREISQAIGEEAAGSRLL 194          
BLAST of mRNA_M-pyrifera_M_contig73343.17396.1 vs. uniprot
Match: UPI00128B47D1 (ABC transporter substrate-binding protein n=1 Tax=Oceanobacillus sp. CFH 90083 TaxID=2592336 RepID=UPI00128B47D1)

HSP 1 Score: 54.7 bits (130), Expect = 5.400e-6
Identity = 39/127 (30.71%), Postives = 67/127 (52.76%), Query Frame = 0
Query:   19 ERVVLATAPAVDLAFDLLGSEAATERIIGLPSAFDEYINVTLPAELLDPDR-RFPEFNAELLLALDPDLIIAGSWIPA---ESVEHLTSAGVDVYVMPTVTDLDHIRAAIRDVGARLGVEARAAELL 141
            ER+V       ++AF L       ++++G+        N T P E+LD D     EFN E++++LDPD+++A +   A   E++E L  A +DV+ +   TD+D     I ++G  +G E  A +L+
Sbjct:   71 ERIVSLMPSNTEIAFAL----GQGDKVVGVSE------NDTYPDEVLDIDTVGGMEFNVEVIISLDPDVVLAHASQVASSQEALEQLEDADIDVFTVADATDVDTTYETIENIGQVVGAEEEAEQLV 187          
BLAST of mRNA_M-pyrifera_M_contig73343.17396.1 vs. uniprot
Match: A0A7Y4XK35_HYPSQ (ABC transporter substrate-binding protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A7Y4XK35_HYPSQ)

HSP 1 Score: 53.5 bits (127), Expect = 1.290e-5
Identity = 27/67 (40.30%), Postives = 41/67 (61.19%), Query Frame = 0
Query:   75 NAELLLALDPDLIIAGSWIPAESVEHLTSAGVDVYVMPTVTDLDHIRAAIRDVGARLGVEARAAELL 141
             AE +LAL PDL+IAG +    +V+ L   G +V ++P  TD D +R  +R + A +G  ARA ++L
Sbjct:   86 TAEEVLALKPDLVIAGEYTTGATVDLLRRLGQNVLIVPMATDFDGMRKTVRQIAAAVGEMARAEKVL 152          
BLAST of mRNA_M-pyrifera_M_contig73343.17396.1 vs. uniprot
Match: A0A6N7AA95_9CHLR (Iron complex transport system substrate-binding protein n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A6N7AA95_9CHLR)

HSP 1 Score: 53.1 bits (126), Expect = 1.800e-5
Identity = 44/130 (33.85%), Postives = 67/130 (51.54%), Query Frame = 0
Query:   15 PATAERVVLATAPAVDLAFDLLGSEAATERIIGLPSAFDEYINVTLPAE---LLDPDRRFPEFNAELLLALDPDLIIAGSWIPAESVEHLTSAGVDVYVMPTVTDLDHIRAAIRDVGARLGVEARAAELL 141
            PA A+RVV + AP+     ++L +  A  +++G    F +Y     PAE   + D      E+N E ++AL PDL++AG   P E V  L   G+ VY +P    L+ + A +  VGA  G  + AA L+
Sbjct:   49 PAPAQRVV-SLAPSNT---EILFAVGAGAQVVGR-DMFSDY-----PAEAASVQDIGGSMGEYNLEAIVALQPDLVLAGGINPPELVASLEGLGLTVYFLPNPATLEEMYANLETVGALTGRGSEAAALV 168          
BLAST of mRNA_M-pyrifera_M_contig73343.17396.1 vs. uniprot
Match: A0A3B9PYY0_9CHLR (ABC transporter substrate-binding protein n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A3B9PYY0_9CHLR)

HSP 1 Score: 51.6 bits (122), Expect = 6.320e-5
Identity = 35/111 (31.53%), Postives = 59/111 (53.15%), Query Frame = 0
Query:   34 DLLGSEAATERIIGLPSAFDEYINVTLPAE---LLDPDRRFPEFNAELLLALDPDLIIAGSWIPAESVEHLTSAGVDVYVMPTVTDLDHIRAAIRDVGARLGVEARAAELL 141
            +LL    A ++++G  S F +Y     PA+   L D    + E+N E+LL+L+PDL++A     AE V+ +   G+ V+ +     LD +   I+DVG   G E  A +++
Sbjct:   73 ELLYVVGAGDQVVGRDS-FSDY-----PADASALPDIGGGYSEYNLEMLLSLEPDLVLAAEINTAELVQSIEDLGIQVFYIKNPLTLDDLYTTIQDVGLLSGHEDAAQQVI 177          
BLAST of mRNA_M-pyrifera_M_contig73343.17396.1 vs. uniprot
Match: A0A511ZPY8_9BACI (Putative ABC transporter substrate-binding lipoprotein YvrC n=3 Tax=Oceanobacillus TaxID=182709 RepID=A0A511ZPY8_9BACI)

HSP 1 Score: 51.6 bits (122), Expect = 6.430e-5
Identity = 29/89 (32.58%), Postives = 52/89 (58.43%), Query Frame = 0
Query:   57 NVTLPAELLDPDR-RFPEFNAELLLALDPDLIIAGSWIPA---ESVEHLTSAGVDVYVMPTVTDLDHIRAAIRDVGARLGVEARAAELL 141
            N T P E+ D D+    EFN E++++LDPD+++A   + A   E+++ L  A ++V+ +   TD+D     I ++G  +G E  A +L+
Sbjct:   99 NDTYPEEVFDIDKVGGMEFNVEVIISLDPDVVLAHESLVASSQEALDQLEGADIEVFTVADATDVDTTYETIDNIGQVVGAEEEAEQLV 187          
BLAST of mRNA_M-pyrifera_M_contig73343.17396.1 vs. uniprot
Match: A0A7X0B171_9PROT (Iron complex transport system substrate-binding protein n=2 Tax=Nitrospirillum iridis TaxID=765888 RepID=A0A7X0B171_9PROT)

HSP 1 Score: 51.2 bits (121), Expect = 8.280e-5
Identity = 44/144 (30.56%), Postives = 65/144 (45.14%), Query Frame = 0
Query:   16 ATAERVVLATAPAVDLAFDLLGSEAATERIIGLPSAFDEYINVTLPAELL--------DPDRRF----------PEFNAELLLALDPDLIIAGSWIPAESVEHLTSAGVDVYVMPTVTDLDHIRAAIRDVGARLGVEARAAELL 141
            A A  +VLA APA   A  L  +     R++ L    D+   + LP   +        DP+  +           E  AE LLAL PDL++AG++    +V    +  + V  +  + D D IRA +R V A LG  A+  +LL
Sbjct:   10 AAAMTLVLAMAPAAAAA-SLARAGEPPRRVVSLNLCTDQLAALLLPPGRIAALSRLARDPELSYVATRIEGIAVTEGGAEELLALKPDLVLAGTYTAQPAVRMAKAHHIPVVQVGLIADFDGIRAQVRTVAAALGESAKGEDLL 152          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig73343.17396.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A348AL84_9FIRM1.310e-733.33Corrinoid ABC transporter substrate-binding protei... [more]
UPI00128B47D15.400e-630.71ABC transporter substrate-binding protein n=1 Tax=... [more]
A0A7Y4XK35_HYPSQ1.290e-540.30ABC transporter substrate-binding protein n=1 Tax=... [more]
A0A6N7AA95_9CHLR1.800e-533.85Iron complex transport system substrate-binding pr... [more]
A0A3B9PYY0_9CHLR6.320e-531.53ABC transporter substrate-binding protein n=1 Tax=... [more]
A0A511ZPY8_9BACI6.430e-532.58Putative ABC transporter substrate-binding lipopro... [more]
A0A7X0B171_9PROT8.280e-530.56Iron complex transport system substrate-binding pr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.1980coord: 7..141
e-value: 1.9E-17
score: 65.3
NoneNo IPR availablePANTHERPTHR30535VITAMIN B12-BINDING PROTEINcoord: 15..140
NoneNo IPR availableSUPERFAMILY53807"Helical backbone" metal receptorcoord: 15..140
IPR002491ABC transporter periplasmic binding domainPFAMPF01497Peripla_BP_2coord: 73..140
e-value: 6.0E-8
score: 32.5
IPR002491ABC transporter periplasmic binding domainPROSITEPS50983FE_B12_PBPcoord: 20..141
score: 17.491

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig73343contigM-pyrifera_M_contig73343:2..424 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig73343.17396.1mRNA_M-pyrifera_M_contig73343.17396.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig73343 2..424 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig73343.17396.1 ID=prot_M-pyrifera_M_contig73343.17396.1|Name=mRNA_M-pyrifera_M_contig73343.17396.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=141bp
PLLAACADTTPADAPATAERVVLATAPAVDLAFDLLGSEAATERIIGLPS
AFDEYINVTLPAELLDPDRRFPEFNAELLLALDPDLIIAGSWIPAESVEH
LTSAGVDVYVMPTVTDLDHIRAAIRDVGARLGVEARAAELL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002491ABC_transptr_periplasmic_BD