prot_M-pyrifera_M_contig73305.17387.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig73305.17387.1
Unique Nameprot_M-pyrifera_M_contig73305.17387.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length161
Homology
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BLAST of mRNA_M-pyrifera_M_contig73305.17387.1 vs. uniprot
Match: A0A2R5GSL0_9STRA (Calmodulin n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GSL0_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 4.950e-6
Identity = 47/151 (31.13%), Postives = 76/151 (50.33%), Query Frame = 0 
Query:   11 EVLSTLRSEVRKLRRDGLSTRKAVAQVFEEFDSRGRGSVRLSDFRRGLRKLGLRLRQAEERKVAEVFDGDGDGEVSVEEFASFVGGPEMSESESKTMEKVRRTVRAAAKKRGKGVRD---VFSDMDKDGNGVLTRVEVEKGLRQLRVKLSR 158
            +VLS LR+ V+K    G+S    + + F  FD+   G +  S+F+ GL+KLGL+L   E   +   F   G   + +  F   +G   +  + + T++K+   +RA  ++R K   D    F   D+DG   +T  ++E GLR L V  SR
Sbjct:  861 DVLSRLRTLVQKAASQGVS----MVESFAHFDANSDGLITRSEFKLGLKKLGLKLGTRELEVLMTEFKVPGGDFIDITHFFKAMGP--VKTTPAVTVDKLLEDLRALLRERQKHGADNQICFEYFDRDGTRSITERQLEDGLRDLNVSASR 1005
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig73305.17387.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2R5GSL0_9STRA4.950e-631.13Calmodulin n=1 Tax=Hondaea fermentalgiana TaxID=23... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 69..97
e-value: 1.8
score: 15.7
coord: 124..152
e-value: 0.28
score: 20.3
coord: 33..61
e-value: 17.0
score: 7.9
IPR002048EF-hand domainPFAMPF13202EF-hand_5coord: 126..142
e-value: 0.045
score: 13.3
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 33..94
e-value: 4.2E-8
score: 33.5
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 29..64
score: 9.297
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 120..155
score: 11.222
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 65..100
score: 9.046
NoneNo IPR availableGENE3D1.10.238.10coord: 14..95
e-value: 5.0E-14
score: 53.8
coord: 104..161
e-value: 1.6E-8
score: 36.2
NoneNo IPR availablePANTHERPTHR34524FAMILY NOT NAMEDcoord: 22..106
coord: 112..161
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 133..145
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 78..90
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 33..160

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig73305contigM-pyrifera_M_contig73305:619..1101 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig73305.17387.1mRNA_M-pyrifera_M_contig73305.17387.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig73305 619..1101 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig73305.17387.1 ID=prot_M-pyrifera_M_contig73305.17387.1|Name=mRNA_M-pyrifera_M_contig73305.17387.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=161bp
MRDEHALLPPEVLSTLRSEVRKLRRDGLSTRKAVAQVFEEFDSRGRGSVR
LSDFRRGLRKLGLRLRQAEERKVAEVFDGDGDGEVSVEEFASFVGGPEMS
ESESKTMEKVRRTVRAAAKKRGKGVRDVFSDMDKDGNGVLTRVEVEKGLR
QLRVKLSRKEM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair