prot_M-pyrifera_M_contig73280.17382.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig73280.17382.1
Unique Name	prot_M-pyrifera_M_contig73280.17382.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	215

Homology

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BLAST of mRNA_M-pyrifera_M_contig73280.17382.1 vs. uniprot
Match: A0A2E7KFZ2_9PLAN (Uncharacterized protein n=2 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KFZ2_9PLAN)

HSP 1 Score: 418 bits (1075), Expect = 3.160e-146
Identity = 207/215 (96.28%), Postives = 211/215 (98.14%), Query Frame = 0

Query:    1 MKNLFERQFVPLAIAVLAISSITVVCLFLLELFSAPQARYGALTLNFKDYSLINVDHQNTSELNTKEQPHRFRVFNIYDSNNRLTDNLCFERKFLFSGGRLIDWNEYKAIPISLPDSERFLNQRLVLHDRFFPKPSPGNWPEFTISASTGETPVISQLSVSEVKTVATYLVYLYASSDLLYAAYGADGTLIQIAHRTRRNGGFYHPQRFPESDNP 215
            MKNLFERQFVPLAIAVLAISSITVVCLFLLELFSAPQARYGALTLNFKDYSLINVDHQNTSELNTKEQPHRFRVFNIYDSNNRLTDNLCFERKFLFSGGRLIDWNEYKAIPISLPD+ERFLNQRLV+ DRFFPKPSPGNWPEFTISASTGETPVISQLSVSE+KTVATY VYLYASSDLLYAAYG DGTLIQIAHRT+ NGGFYHPQRFPESDNP
Sbjct:    1 MKNLFERQFVPLAIAVLAISSITVVCLFLLELFSAPQARYGALTLNFKDYSLINVDHQNTSELNTKEQPHRFRVFNIYDSNNRLTDNLCFERKFLFSGGRLIDWNEYKAIPISLPDNERFLNQRLVIRDRFFPKPSPGNWPEFTISASTGETPVISQLSVSELKTVATYFVYLYASSDLLYAAYGTDGTLIQIAHRTQLNGGFYHPQRFPESDNP 215

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig73280.17382.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig73280.17382.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2E7KFZ2_9PLAN	3.160e-146	96.28	Uncharacterized protein n=2 Tax=Gimesia TaxID=1649...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 31..215
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..30
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..11
None	No IPR available	TMHMM	TMhelix		coord: 13..35

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig73280	contig	M-pyrifera_M_contig73280:2..646 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig73280.17382.1	mRNA_M-pyrifera_M_contig73280.17382.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig73280 2..646 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig73280.17382.1 ID=prot_M-pyrifera_M_contig73280.17382.1|Name=mRNA_M-pyrifera_M_contig73280.17382.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=215bp
MKNLFERQFVPLAIAVLAISSITVVCLFLLELFSAPQARYGALTLNFKDY
SLINVDHQNTSELNTKEQPHRFRVFNIYDSNNRLTDNLCFERKFLFSGGR
LIDWNEYKAIPISLPDSERFLNQRLVLHDRFFPKPSPGNWPEFTISASTG
ETPVISQLSVSEVKTVATYLVYLYASSDLLYAAYGADGTLIQIAHRTRRN
GGFYHPQRFPESDNP