Homology
BLAST of mRNA_M-pyrifera_M_contig73280.17382.1 vs. uniprot
Match: A0A2E7KFZ2_9PLAN (Uncharacterized protein n=2 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KFZ2_9PLAN) HSP 1 Score: 418 bits (1075), Expect = 3.160e-146 Identity = 207/215 (96.28%), Postives = 211/215 (98.14%), Query Frame = 1 Query: 1 MKNLFERQFVPLAIAVLAISSITVVCLFLLELFSAPQARYGALTLNFKDYSLINVDHQNTSELNTKEQPHRFRVFNIYDSNNRLTDNLCFERKFLFSGGRLIDWNEYKAIPISLPDSERFLNQRLVLHDRFFPKPSPGNWPEFTISASTGETPVISQLSVSEVKTVATYLVYLYASSDLLYAAYGADGTLIQIAHRTRRNGGFYHPQRFPESDNP 645
MKNLFERQFVPLAIAVLAISSITVVCLFLLELFSAPQARYGALTLNFKDYSLINVDHQNTSELNTKEQPHRFRVFNIYDSNNRLTDNLCFERKFLFSGGRLIDWNEYKAIPISLPD+ERFLNQRLV+ DRFFPKPSPGNWPEFTISASTGETPVISQLSVSE+KTVATY VYLYASSDLLYAAYG DGTLIQIAHRT+ NGGFYHPQRFPESDNP
Sbjct: 1 MKNLFERQFVPLAIAVLAISSITVVCLFLLELFSAPQARYGALTLNFKDYSLINVDHQNTSELNTKEQPHRFRVFNIYDSNNRLTDNLCFERKFLFSGGRLIDWNEYKAIPISLPDNERFLNQRLVIRDRFFPKPSPGNWPEFTISASTGETPVISQLSVSELKTVATYFVYLYASSDLLYAAYGTDGTLIQIAHRTQLNGGFYHPQRFPESDNP 215
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | signal anchor |
Exons | 1 |
Model size | 645 |
Cds size | 645 |
Stop | 0 |
Start | 1 |
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816629.9005053-CDS-M-pyrifera_M_contig73280:1..646 | 1622816629.9005053-CDS-M-pyrifera_M_contig73280:1..646 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig73280 2..646 - |
1692278087.120984-CDS-M-pyrifera_M_contig73280:1..646 | 1692278087.120984-CDS-M-pyrifera_M_contig73280:1..646 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig73280 2..646 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig73280.17382.1 >prot_M-pyrifera_M_contig73280.17382.1 ID=prot_M-pyrifera_M_contig73280.17382.1|Name=mRNA_M-pyrifera_M_contig73280.17382.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=215bp
MKNLFERQFVPLAIAVLAISSITVVCLFLLELFSAPQARYGALTLNFKDY SLINVDHQNTSELNTKEQPHRFRVFNIYDSNNRLTDNLCFERKFLFSGGR LIDWNEYKAIPISLPDSERFLNQRLVLHDRFFPKPSPGNWPEFTISASTG ETPVISQLSVSEVKTVATYLVYLYASSDLLYAAYGADGTLIQIAHRTRRN GGFYHPQRFPESDNP back to topmRNA from alignment at M-pyrifera_M_contig73280:2..646- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_M-pyrifera_M_contig73280.17382.1 ID=mRNA_M-pyrifera_M_contig73280.17382.1|Name=mRNA_M-pyrifera_M_contig73280.17382.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=645bp|location=Sequence derived from alignment at M-pyrifera_M_contig73280:2..646- (Macrocystis pyrifera P11B4 male) ATGAAGAATTTATTCGAACGTCAGTTTGTCCCGCTGGCAATTGCGGTGCT
GGCCATTAGTTCTATCACGGTTGTCTGTTTATTCCTGTTGGAATTATTTT
CTGCCCCTCAAGCCCGGTATGGAGCGCTTACGCTTAACTTCAAAGACTAT
TCGCTAATCAATGTGGATCACCAGAATACATCTGAGTTAAATACAAAAGA
GCAGCCCCACCGGTTCAGAGTTTTTAATATCTATGATTCCAATAATCGGC
TGACCGATAATCTCTGTTTCGAACGGAAATTCTTATTCAGTGGGGGAAGA
CTGATCGACTGGAATGAATATAAAGCGATCCCGATTTCTCTTCCCGACAG
TGAACGATTCCTCAATCAGAGGCTGGTTCTTCATGATCGATTCTTTCCGA
AACCTTCACCAGGCAACTGGCCTGAATTTACGATATCAGCGTCAACAGGT
GAGACGCCTGTCATCTCTCAATTATCTGTGAGTGAAGTGAAGACGGTCGC
AACGTATCTCGTTTATTTATACGCTTCCTCTGATTTACTTTACGCAGCTT
ATGGAGCAGACGGGACTCTCATTCAGATTGCACATCGTACACGACGTAAT
GGAGGCTTCTATCATCCTCAACGGTTTCCCGAATCTGACAATCCT back to topCoding sequence (CDS) from alignment at M-pyrifera_M_contig73280:2..646- >mRNA_M-pyrifera_M_contig73280.17382.1 ID=mRNA_M-pyrifera_M_contig73280.17382.1|Name=mRNA_M-pyrifera_M_contig73280.17382.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1290bp|location=Sequence derived from alignment at M-pyrifera_M_contig73280:2..646- (Macrocystis pyrifera P11B4 male) ATGAAGAATTTATTCGAACGTCAGTTTGTCCCGCTGGCAATTGCGGTGCT GGCCATTAGTTCTATCACGGTTGTCTGTTTATTCCTGTTGGAATTATTTT CTGCCCCTCAAGCCCGGTATGGAGCGCTTACGCTTAACTTCAAAGACTAT TCGCTAATCAATGTGGATCACCAGAATACATCTGAGTTAAATACAAAAGA GCAGCCCCACCGGTTCAGAGTTTTTAATATCTATGATTCCAATAATCGGC TGACCGATAATCTCTGTTTCGAACGGAAATTCTTATTCAGTGGGGGAAGA CTGATCGACTGGAATGAATATAAAGCGATCCCGATTTCTCTTCCCGACAG TGAACGATTCCTCAATCAGAGGCTGGTTCTTCATGATCGATTCTTTCCGA AACCTTCACCAGGCAACTGGCCTGAATTTACGATATCAGCGTCAACAGGT GAGACGCCTGTCATCTCTCAATTATCTGTGAGTGAAGTGAAGACGGTCGC AACGTATCTCGTTTATTTATACGCTTCCTCTGATTTACTTTACGCAGCTT ATGGAGCAGACGGGACTCTCATTCAGATTGCACATCGTACACGACGTAAT GGAGGCTTCTATCATCCTCAACGGTTTCCCGAATCTGACAATCCTATGAA GAATTTATTCGAACGTCAGTTTGTCCCGCTGGCAATTGCGGTGCTGGCCA TTAGTTCTATCACGGTTGTCTGTTTATTCCTGTTGGAATTATTTTCTGCC CCTCAAGCCCGGTATGGAGCGCTTACGCTTAACTTCAAAGACTATTCGCT AATCAATGTGGATCACCAGAATACATCTGAGTTAAATACAAAAGAGCAGC CCCACCGGTTCAGAGTTTTTAATATCTATGATTCCAATAATCGGCTGACC GATAATCTCTGTTTCGAACGGAAATTCTTATTCAGTGGGGGAAGACTGAT CGACTGGAATGAATATAAAGCGATCCCGATTTCTCTTCCCGACAGTGAAC GATTCCTCAATCAGAGGCTGGTTCTTCATGATCGATTCTTTCCGAAACCT TCACCAGGCAACTGGCCTGAATTTACGATATCAGCGTCAACAGGTGAGAC GCCTGTCATCTCTCAATTATCTGTGAGTGAAGTGAAGACGGTCGCAACGT ATCTCGTTTATTTATACGCTTCCTCTGATTTACTTTACGCAGCTTATGGA GCAGACGGGACTCTCATTCAGATTGCACATCGTACACGACGTAATGGAGG CTTCTATCATCCTCAACGGTTTCCCGAATCTGACAATCCT back to top
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