mRNA_M-pyrifera_M_contig7326.17377.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig7326.17377.1 vs. uniprot
Match: A0A6H5J8U9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8U9_9PHAE) HSP 1 Score: 171 bits (434), Expect = 1.460e-48 Identity = 81/146 (55.48%), Postives = 107/146 (73.29%), Query Frame = 1 Query: 112 YVEVGTKTNVFVSANAYDTRSGQTSGGSGCMDDGCAPALTRDGISD-DVESRWSCNPSIVPDGGLCEIEYVFQAPQDIKSVQVVFWRGNERTRTLEAAIDGEVIGSFDSYPESVFNSFDIKGSDVHTLTLTSSGITQNEWISLIEV 546 +VE G+KT V V+A AYD R G+++G GC + GC P L DG+ + D ESRWSC IVPDGG CEI + F +PQDI VQV FW+G+ERTRTL+ I+G+ IG ++SYP S FNSF I+ + VHT+T+ S GI +++WISL+EV Sbjct: 251 FVEAGSKTTVGVTATAYDDRPGESAGDVGCGEMGCLPDLAHDGVGEEDTESRWSCAEEIVPDGGQCEISFTFDSPQDITDVQVAFWKGDERTRTLKVKINGDKIGEYESYPGSTFNSFGIQENGVHTVTMESVGIDRDDWISLLEV 396
BLAST of mRNA_M-pyrifera_M_contig7326.17377.1 vs. uniprot
Match: A0A6H5JFX1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFX1_9PHAE) HSP 1 Score: 166 bits (421), Expect = 3.020e-47 Identity = 85/168 (50.60%), Postives = 107/168 (63.69%), Query Frame = 1 Query: 43 LFSICGENAEYKCVDPSAVCVDGYVEVGTKTNVFVSANAYDTRSGQTSGGSGCMDDGCAPALTRDGISDDVESRWSCNPSIVPDGGLCEIEYVFQAPQDIKSVQVVFWRGNERTRTLEAAIDGEVIGSFDSYPESVFNSFDIKGSDVHTLTLTSSGITQNEWISLIEV 546 + +I ++ Y C D V+ T T + SA +D R GQ SG GC GC P L DGI+DDVESRWSC IVPDGG CEIE+ F PQ++K +QV FW+G ERTRTL+ I+GE G FDS+P SV + FD+ DVHT+TL S G+ +EWISL+EV Sbjct: 172 VCTIVEDSCHYLCGDMDHELVNA----ATITAIAASATGFDERPGQASGDHGCGKYGCLPVLATDGITDDVESRWSCAEDIVPDGGQCEIEFTFSHPQNLKQLQVDFWKGEERTRTLKVKINGEKFGEFDSHPGSVTSYFDVIAYDVHTVTLESLGLDTDEWISLLEV 335
BLAST of mRNA_M-pyrifera_M_contig7326.17377.1 vs. uniprot
Match: D7G3F6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F6_ECTSI) HSP 1 Score: 160 bits (405), Expect = 3.380e-46 Identity = 80/147 (54.42%), Postives = 102/147 (69.39%), Query Frame = 1 Query: 115 VEVGTKTNVFVSANAYDTRSGQTSGGSGCMD---DGCAPALTRDGISDDVESRWSCNPSIVPDGGLCEIEYVFQAPQDIKSVQVVFWRGNERTRTLEAAIDGEVIGSFDSYPESVFNSFDIKGSDVHTLTLTSSGITQNEWISLIEV 546 VEVGTKT+V VSA A+DTR G +SG GC + +GC PA TRDGIS++ ESRWSC IVP GG C+IEYVF PQDI+ +QV FW+G+ER RTLE DG + + +SY S FN + + + ++ L S + +NEWISLIEV Sbjct: 73 VEVGTKTDVSVSATAHDTRPGSSSGDVGCGEAGGNGCTPANTRDGISNEAESRWSCASKIVPGGGPCQIEYVFGEPQDIEDIQVAFWKGDERVRTLEVYFDGTLYRTHESYAGSTFNPLGVSATGISSVMLESVDLLENEWISLIEV 219
BLAST of mRNA_M-pyrifera_M_contig7326.17377.1 vs. uniprot
Match: A0A6H5JTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT4_9PHAE) HSP 1 Score: 162 bits (410), Expect = 1.770e-43 Identity = 82/147 (55.78%), Postives = 103/147 (70.07%), Query Frame = 1 Query: 115 VEVGTKTNVFVSANAYDTRSGQTSGGSGCMD---DGCAPALTRDGISDDVESRWSCNPSIVPDGGLCEIEYVFQAPQDIKSVQVVFWRGNERTRTLEAAIDGEVIGSFDSYPESVFNSFDIKGSDVHTLTLTSSGITQNEWISLIEV 546 VEVGTKT+V VSA AYDTR G +SG GC + +GC+PA TRDGIS++ ESRWSC IVP GG C+IEYVF PQDI+ ++V FW G+ER RTLE DG + + +SY S FNS + + + T+ L S + +NEWISLIEV Sbjct: 479 VEVGTKTDVSVSATAYDTRPGSSSGDVGCGEAGGNGCSPANTRDGISNETESRWSCASKIVPGGGPCQIEYVFGEPQDIEDIKVAFWMGDERVRTLEVYFDGTLHRTHESYAGSTFNSLGVSATGIGTVMLESVDLLENEWISLIEV 625
BLAST of mRNA_M-pyrifera_M_contig7326.17377.1 vs. uniprot
Match: D7FI77_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI77_ECTSI) HSP 1 Score: 151 bits (381), Expect = 3.050e-43 Identity = 75/151 (49.67%), Postives = 100/151 (66.23%), Query Frame = 1 Query: 103 VDGYVEVGTKTNVFVSANAYDTRSGQTSGGSGCMDDG---CAPALTRDGISDDVESRWSCNPSIVPDGGLCEIEYVFQAPQDIKSVQVVFWRGNERTRTLEAAIDGEVIGSFDSYPESVFNSFDIKGSDVHTLTLTSSGITQNEWISLIEV 546 VDG VEVGTK V VSA A+DTR G +SG GC + G C TRDGI ++ESRWSC +VPD G C+IE+ F PQ I +QV FW+GN+RTRTL ++GE+ + +SY +S FN+ + ++ T+ L S+ + +EWISLIEV Sbjct: 17 VDGAVEVGTKIEVGVSATAHDTRPGNSSGDVGCGEVGGLGCTATNTRDGIFSEIESRWSCATKLVPDEGPCQIEFTFAEPQHIVDIQVAFWKGNDRTRTLGVHVNGELTHTHESYTDSTFNTLGVTANEASTVMLESTALLSDEWISLIEV 167
BLAST of mRNA_M-pyrifera_M_contig7326.17377.1 vs. uniprot
Match: D7G0S3_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S3_ECTSI) HSP 1 Score: 151 bits (382), Expect = 8.510e-42 Identity = 75/151 (49.67%), Postives = 103/151 (68.21%), Query Frame = 1 Query: 103 VDGYVEVGTKTNVFVSANAYDTRSGQTSGGSGCMD---DGCAPALTRDGISDDVESRWSCNPSIVPDGGLCEIEYVFQAPQDIKSVQVVFWRGNERTRTLEAAIDGEVIGSFDSYPESVFNSFDIKGSDVHTLTLTSSGITQNEWISLIEV 546 VD VEVGTKT V VSA A+D R+G++SG GC + +GCA RDGIS ++ESRWSC ++ D G C+IE+ F PQ+I +QV FW+GNER RTLE ++GE+ + +SY +S FN+ + ++ +T+ L S + NEWISLIEV Sbjct: 150 VDDAVEVGTKTEVSVSATAHDVRAGRSSGEVGCGEAGGNGCAANNARDGISTEIESRWSCAAKLLDDEGPCQIEFSFAEPQNIVDIQVAFWKGNERVRTLEVYVNGELTHTHESYADSTFNTLGVTANEANTVMLESVSLLSNEWISLIEV 300
BLAST of mRNA_M-pyrifera_M_contig7326.17377.1 vs. uniprot
Match: D7G3F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F4_ECTSI) HSP 1 Score: 154 bits (388), Expect = 6.450e-41 Identity = 77/151 (50.99%), Postives = 101/151 (66.89%), Query Frame = 1 Query: 103 VDGYVEVGTKTNVFVSANAYDTRSGQTSGGSGCMDDG---CAPALTRDGISDDVESRWSCNPSIVPDGGLCEIEYVFQAPQDIKSVQVVFWRGNERTRTLEAAIDGEVIGSFDSYPESVFNSFDIKGSDVHTLTLTSSGITQNEWISLIEV 546 VDG VEVGTKT V VS+ A+D R G +SG +GC + G C TRDGI ++ESRWSC +V D G C+IE+ F PQ I +QV FW+GNERTRTLE I+GE+ + +SY ++ FN+ + +DV T+ L S + +EWISLIEV Sbjct: 359 VDGAVEVGTKTEVGVSSTAHDVRPGMSSGDAGCGEVGGLGCTATNTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIMDIQVAFWKGNERTRTLEVHINGEMTHTHESYADATFNTLGVTATDVSTVMLESVALLSDEWISLIEV 509
BLAST of mRNA_M-pyrifera_M_contig7326.17377.1 vs. uniprot
Match: D7G5F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5F4_ECTSI) HSP 1 Score: 146 bits (368), Expect = 1.770e-40 Identity = 76/151 (50.33%), Postives = 98/151 (64.90%), Query Frame = 1 Query: 103 VDGYVEVGTKTNVFVSANAYDTRSGQTSGGSGCMDDG---CAPALTRDGISDDVESRWSCNPSIVPDGGLCEIEYVFQAPQDIKSVQVVFWRGNERTRTLEAAIDGEVIGSFDSYPESVFNSFDIKGSDVHTLTLTSSGITQNEWISLIEV 546 VDG VEVGTKT V VS+ A+D R G GC + G C A TRDGI ++ESRWSC +V D G C+IE+ F PQ I +QV FW+GNERTRTLE I+GE+ + +SY ++ FN+ + +DV T+ L S + +EWISLIEV Sbjct: 85 VDGAVEVGTKTEVGVSSTAHDVRPGDD----GCGEVGGLGCTAANTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIVDIQVAFWKGNERTRTLEVYINGEMTHTHESYADATFNTLGVTATDVSTVMLESVALLSDEWISLIEV 231
BLAST of mRNA_M-pyrifera_M_contig7326.17377.1 vs. uniprot
Match: D7FI81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI81_ECTSI) HSP 1 Score: 147 bits (370), Expect = 5.650e-40 Identity = 73/146 (50.00%), Postives = 96/146 (65.75%), Query Frame = 1 Query: 118 EVGTKTNVFVSANAYDTRSGQTSGGSGCMD---DGCAPALTRDGISDDVESRWSCNPSIVPDGGLCEIEYVFQAPQDIKSVQVVFWRGNERTRTLEAAIDGEVIGSFDSYPESVFNSFDIKGSDVHTLTLTSSGITQNEWISLIEV 546 EVGT T V VSA A+DTR G +SG GC + DGCA DGI ++ESRWSC +VPD G C+IE+ F PQDI +QV FW GNERTRT++ IDGE+ + +SY +S FN+ + ++ T+ L S + +EWISL+EV Sbjct: 158 EVGTMTEVNVSATAHDTRPGSSSGDVGCGETGGDGCAAIKAHDGIISEIESRWSCATMLVPDEGPCQIEFSFADPQDIVDIQVAFWEGNERTRTVDIFIDGELTHTHESYADSTFNTLGVTATEASTVMLESVDLLSDEWISLLEV 303
BLAST of mRNA_M-pyrifera_M_contig7326.17377.1 vs. uniprot
Match: D8LCQ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCQ5_ECTSI) HSP 1 Score: 138 bits (348), Expect = 5.980e-39 Identity = 64/113 (56.64%), Postives = 82/113 (72.57%), Query Frame = 1 Query: 211 GCAPALTRDGISD-DVESRWSCNPSIVPDGGLCEIEYVFQAPQDIKSVQVVFWRGNERTRTLEAAIDGEVIGSFDSYPESVFNSFDIKGSDVHTLTLTSSGITQNEWISLIEV 546 GC P L DG+ + D ESRWSC IVPDGG CEI + F +PQDI VQV FW+G+ERTRTL+ I+G+ IG ++SYP S FNSF I+ + VHT+ + S GI ++WISL+EV Sbjct: 2 GCLPDLAHDGVGEEDTESRWSCAEEIVPDGGQCEITFTFDSPQDITDVQVAFWKGDERTRTLKVKINGDKIGEYESYPGSTFNSFGIQENGVHTVAMESVGIDADDWISLLEV 114 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7326.17377.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7326.17377.1 >prot_M-pyrifera_M_contig7326.17377.1 ID=prot_M-pyrifera_M_contig7326.17377.1|Name=mRNA_M-pyrifera_M_contig7326.17377.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=189bp YDGGDCCECTCISGLFSICGENAEYKCVDPSAVCVDGYVEVGTKTNVFVSback to top mRNA from alignment at M-pyrifera_M_contig7326:9515..10546+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig7326.17377.1 ID=mRNA_M-pyrifera_M_contig7326.17377.1|Name=mRNA_M-pyrifera_M_contig7326.17377.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1032bp|location=Sequence derived from alignment at M-pyrifera_M_contig7326:9515..10546+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig7326:9515..10546+ >mRNA_M-pyrifera_M_contig7326.17377.1 ID=mRNA_M-pyrifera_M_contig7326.17377.1|Name=mRNA_M-pyrifera_M_contig7326.17377.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1134bp|location=Sequence derived from alignment at M-pyrifera_M_contig7326:9515..10546+ (Macrocystis pyrifera P11B4 male)back to top |