prot_M-pyrifera_M_contig73127.17356.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig73127.17356.1
Unique Nameprot_M-pyrifera_M_contig73127.17356.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length57
Homology
BLAST of mRNA_M-pyrifera_M_contig73127.17356.1 vs. uniprot
Match: A0A6H5JZY6_9PHAE (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZY6_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 1.200e-26
Identity = 54/57 (94.74%), Postives = 56/57 (98.25%), Query Frame = 0
Query:    1 RIRAVSLIKGVDKGPEGLKLISDKIREGLCGAVPVSVLMGANVANEVARDELCESTV 57
            RIRAVSLIKGVDKGP+GLKLISD IREGLCGAVPVSVLMGANVANEVARDELCEST+
Sbjct:  160 RIRAVSLIKGVDKGPDGLKLISDHIREGLCGAVPVSVLMGANVANEVARDELCESTL 216          
BLAST of mRNA_M-pyrifera_M_contig73127.17356.1 vs. uniprot
Match: GPD1L_DANRE (Glycerol-3-phosphate dehydrogenase 1-like protein n=17 Tax=Teleostei TaxID=32443 RepID=GPD1L_DANRE)

HSP 1 Score: 75.9 bits (185), Expect = 7.850e-15
Identity = 37/57 (64.91%), Postives = 47/57 (82.46%), Query Frame = 0
Query:    1 RIRAVSLIKGVDKGPEGLKLISDKIREGLCGAVPVSVLMGANVANEVARDELCESTV 57
            R R ++LIKG+D+GPEGLKLISD IRE +   + VSVLMGAN+ANEVA ++ CEST+
Sbjct:  113 RARGITLIKGIDEGPEGLKLISDIIREKM--GIDVSVLMGANIANEVAAEKFCESTI 167          
BLAST of mRNA_M-pyrifera_M_contig73127.17356.1 vs. uniprot
Match: A0A8C1D307_CYPCA (Glycerol-3-phosphate dehydrogenase 1 like n=2 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1D307_CYPCA)

HSP 1 Score: 73.9 bits (180), Expect = 1.040e-14
Identity = 35/57 (61.40%), Postives = 47/57 (82.46%), Query Frame = 0
Query:    1 RIRAVSLIKGVDKGPEGLKLISDKIREGLCGAVPVSVLMGANVANEVARDELCESTV 57
            + R ++LIKG+D+GPEG+KLISD IRE +   + VSVLMGAN+ANEVA ++ CEST+
Sbjct:  113 KARGITLIKGIDEGPEGMKLISDIIREKM--GIDVSVLMGANIANEVAAEKFCESTI 167          
BLAST of mRNA_M-pyrifera_M_contig73127.17356.1 vs. uniprot
Match: A0A8C4DM40_DICLA (NAD_Gly3P_dh_N domain-containing protein n=1 Tax=Dicentrarchus labrax TaxID=13489 RepID=A0A8C4DM40_DICLA)

HSP 1 Score: 73.6 bits (179), Expect = 1.370e-14
Identity = 35/57 (61.40%), Postives = 47/57 (82.46%), Query Frame = 0
Query:    1 RIRAVSLIKGVDKGPEGLKLISDKIREGLCGAVPVSVLMGANVANEVARDELCESTV 57
            + R ++LIKG+D+GPEGLKLISD IRE +   + VSVLMGAN+ANEVA ++ CE+T+
Sbjct:  113 KARGITLIKGIDEGPEGLKLISDIIREKM--GIDVSVLMGANIANEVAAEKFCETTI 167          
BLAST of mRNA_M-pyrifera_M_contig73127.17356.1 vs. uniprot
Match: A0A8C1CIE9_CYPCA (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1CIE9_CYPCA)

HSP 1 Score: 74.7 bits (182), Expect = 1.410e-14
Identity = 36/57 (63.16%), Postives = 47/57 (82.46%), Query Frame = 0
Query:    1 RIRAVSLIKGVDKGPEGLKLISDKIREGLCGAVPVSVLMGANVANEVARDELCESTV 57
            + R ++LIKG+D+GPEGLKLISD IRE +   + VSVLMGAN+ANEVA ++ CEST+
Sbjct:   94 KARGITLIKGIDEGPEGLKLISDIIREKM--GIDVSVLMGANIANEVAAEKFCESTI 148          
BLAST of mRNA_M-pyrifera_M_contig73127.17356.1 vs. uniprot
Match: S4RW01_PETMA (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=2 Tax=Petromyzon marinus TaxID=7757 RepID=S4RW01_PETMA)

HSP 1 Score: 75.1 bits (183), Expect = 1.510e-14
Identity = 37/53 (69.81%), Postives = 46/53 (86.79%), Query Frame = 0
Query:    5 VSLIKGVDKGPEGLKLISDKIREGLCGAVPVSVLMGANVANEVARDELCESTV 57
            +SLIKGVD+GP+GLKLISD IRE L   +PVSVLMGAN+ANEVA ++ CE+T+
Sbjct:  119 ISLIKGVDEGPDGLKLISDIIREQL--DIPVSVLMGANIANEVAEEKFCETTI 169          
BLAST of mRNA_M-pyrifera_M_contig73127.17356.1 vs. uniprot
Match: A0A8C1CN75_CYPCA (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1CN75_CYPCA)

HSP 1 Score: 74.7 bits (182), Expect = 1.510e-14
Identity = 36/57 (63.16%), Postives = 47/57 (82.46%), Query Frame = 0
Query:    1 RIRAVSLIKGVDKGPEGLKLISDKIREGLCGAVPVSVLMGANVANEVARDELCESTV 57
            + R ++LIKG+D+GPEGLKLISD IRE +   + VSVLMGAN+ANEVA ++ CEST+
Sbjct:   92 KARGITLIKGIDEGPEGLKLISDIIREKM--GIDVSVLMGANIANEVAAEKFCESTI 146          
BLAST of mRNA_M-pyrifera_M_contig73127.17356.1 vs. uniprot
Match: UPI0018FFF67C (glycerol-3-phosphate dehydrogenase 1-like protein isoform X2 n=2 Tax=Teleostei TaxID=32443 RepID=UPI0018FFF67C)

HSP 1 Score: 74.7 bits (182), Expect = 1.700e-14
Identity = 36/55 (65.45%), Postives = 47/55 (85.45%), Query Frame = 0
Query:    3 RAVSLIKGVDKGPEGLKLISDKIREGLCGAVPVSVLMGANVANEVARDELCESTV 57
            R ++LIKG+D+GPEGLKLISD IRE +  A+ VSVLMGAN+ANEVA ++ CE+T+
Sbjct:  115 RGITLIKGIDEGPEGLKLISDIIREKM--AIDVSVLMGANIANEVAAEKFCETTI 167          
BLAST of mRNA_M-pyrifera_M_contig73127.17356.1 vs. uniprot
Match: W5M2H7_LEPOC (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=2 Tax=Lepisosteidae TaxID=7915 RepID=W5M2H7_LEPOC)

HSP 1 Score: 74.7 bits (182), Expect = 2.070e-14
Identity = 36/57 (63.16%), Postives = 47/57 (82.46%), Query Frame = 0
Query:    1 RIRAVSLIKGVDKGPEGLKLISDKIREGLCGAVPVSVLMGANVANEVARDELCESTV 57
            + R +SLIKG+D+GPEGLKLISD IRE +   + VSVLMGAN+ANEVA ++ CE+T+
Sbjct:  113 KARGISLIKGIDEGPEGLKLISDIIREKM--GIDVSVLMGANIANEVAAEKFCETTI 167          
BLAST of mRNA_M-pyrifera_M_contig73127.17356.1 vs. uniprot
Match: A0A672NJQ9_SINGR (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=24 Tax=Clupeocephala TaxID=186625 RepID=A0A672NJQ9_SINGR)

HSP 1 Score: 74.7 bits (182), Expect = 2.080e-14
Identity = 36/57 (63.16%), Postives = 47/57 (82.46%), Query Frame = 0
Query:    1 RIRAVSLIKGVDKGPEGLKLISDKIREGLCGAVPVSVLMGANVANEVARDELCESTV 57
            + R ++LIKG+D+GPEGLKLISD IRE +   + VSVLMGAN+ANEVA ++ CEST+
Sbjct:  114 KARGITLIKGIDEGPEGLKLISDIIREKM--GIDVSVLMGANIANEVAAEKFCESTI 168          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig73127.17356.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZY6_9PHAE1.200e-2694.74Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Ta... [more]
GPD1L_DANRE7.850e-1564.91Glycerol-3-phosphate dehydrogenase 1-like protein ... [more]
A0A8C1D307_CYPCA1.040e-1461.40Glycerol-3-phosphate dehydrogenase 1 like n=2 Tax=... [more]
A0A8C4DM40_DICLA1.370e-1461.40NAD_Gly3P_dh_N domain-containing protein n=1 Tax=D... [more]
A0A8C1CIE9_CYPCA1.410e-1463.16Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Ta... [more]
S4RW01_PETMA1.510e-1469.81Glycerol-3-phosphate dehydrogenase [NAD(+)] n=2 Ta... [more]
A0A8C1CN75_CYPCA1.510e-1463.16Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Ta... [more]
UPI0018FFF67C1.700e-1465.45glycerol-3-phosphate dehydrogenase 1-like protein ... [more]
W5M2H7_LEPOC2.070e-1463.16Glycerol-3-phosphate dehydrogenase [NAD(+)] n=2 Ta... [more]
A0A672NJQ9_SINGR2.080e-1463.16Glycerol-3-phosphate dehydrogenase [NAD(+)] n=24 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011128Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminalPFAMPF01210NAD_Gly3P_dh_Ncoord: 3..57
e-value: 1.8E-10
score: 41.0
NoneNo IPR availableGENE3D3.40.50.720coord: 1..57
e-value: 1.3E-13
score: 52.7
NoneNo IPR availablePANTHERPTHR11728:SF32GLYCEROL-3-PHOSPHATE DEHYDROGENASE [NAD(+)], CYTOPLASMICcoord: 4..57
NoneNo IPR availablePANTHERPTHR11728GLYCEROL-3-PHOSPHATE DEHYDROGENASEcoord: 4..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig73127contigM-pyrifera_M_contig73127:775..945 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig73127.17356.1mRNA_M-pyrifera_M_contig73127.17356.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig73127 775..945 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig73127.17356.1 ID=prot_M-pyrifera_M_contig73127.17356.1|Name=mRNA_M-pyrifera_M_contig73127.17356.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=57bp
RIRAVSLIKGVDKGPEGLKLISDKIREGLCGAVPVSVLMGANVANEVARD
ELCESTV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011128G3P_DH_NAD-dep_N