prot_M-pyrifera_M_contig10081.173.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig10081.173.1
Unique Nameprot_M-pyrifera_M_contig10081.173.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length124
Homology
BLAST of mRNA_M-pyrifera_M_contig10081.173.1 vs. uniprot
Match: D7FXK3_ECTSI (ATP-dependent DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXK3_ECTSI)

HSP 1 Score: 190 bits (482), Expect = 4.900e-54
Identity = 96/127 (75.59%), Postives = 108/127 (85.04%), Query Frame = 0
Query:    1 KTATAESLADALNRAMRVEP---AAKEFLAMPYHGKMGDAERSDAQARFMSGEVDVITGSVAFGMGIDKSDVRFVVHWDLPKSVEGLYQELGRAGRDGSPAASVVYHSQESASLLAFLAKKPQPIAG 124
            K  TAE LA ALNRA+R E      K FLAMPYHGKM D +R++AQA+FMSGEVDVI GSVAFGMG+DKSDVRFVVHWDLPKS+EGLYQELGRAGRDGS A SVVYHS+E+  LLAFLA+KP+P+AG
Sbjct:  295 KRDTAEELAKALNRALREESLLDGGKAFLAMPYHGKMSDHDRTEAQAKFMSGEVDVIAGSVAFGMGVDKSDVRFVVHWDLPKSMEGLYQELGRAGRDGSKAVSVVYHSRETVGLLAFLARKPRPLAG 421          
BLAST of mRNA_M-pyrifera_M_contig10081.173.1 vs. uniprot
Match: A0A6H5KCP0_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCP0_9PHAE)

HSP 1 Score: 187 bits (476), Expect = 5.510e-53
Identity = 98/129 (75.97%), Postives = 109/129 (84.50%), Query Frame = 0
Query:    1 KTATAESLADALNRAMRVEP---AAKEFLAMPYHGKMGDAERSDAQAR--FMSGEVDVITGSVAFGMGIDKSDVRFVVHWDLPKSVEGLYQELGRAGRDGSPAASVVYHSQESASLLAFLAKKPQPIAG 124
            K  TAE LA ALNRA+R E      K FLAMPYHGKM D +R++AQAR  FMSGEVDVITGSVAFGMG+DKSDVRFVVHWDLPKS+EGLYQELGRAGRDGS A SVVYHS+E+  LLAFLA+KP+P+AG
Sbjct:  133 KRDTAEELAKALNRALRKESLLDGRKAFLAMPYHGKMSDHDRTEAQARAKFMSGEVDVITGSVAFGMGVDKSDVRFVVHWDLPKSMEGLYQELGRAGRDGSKAVSVVYHSRETVELLAFLARKPRPLAG 261          
BLAST of mRNA_M-pyrifera_M_contig10081.173.1 vs. uniprot
Match: B5YN30_THAPS (DNA helicase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YN30_THAPS)

HSP 1 Score: 108 bits (271), Expect = 1.870e-26
Identity = 51/93 (54.84%), Postives = 65/93 (69.89%), Query Frame = 0
Query:   25 FLAMPYHGKMGDAERSDAQARFMSGEVDVITGSVAFGMGIDKSDVRFVVHWDLPKSVEGLYQELGRAGRDGSPAASVVYHSQESASLLAFLAK 117
             +A  YH  + DAER D Q ++ +G V V   +VAFGMGID   VR+VVHW L KS+EG YQE GRAGRDG P+ S++Y+S++ AS  AFL K
Sbjct:  199 LVAAAYHAGLKDAEREDTQQKWTAGSVHVAVATVAFGMGIDLPHVRYVVHWSLAKSLEGFYQESGRAGRDGKPSISILYYSKDDASKFAFLLK 291          
BLAST of mRNA_M-pyrifera_M_contig10081.173.1 vs. uniprot
Match: UPI001985D810 (hypothetical protein n=1 Tax=Okeania sp. KiyG1 TaxID=2720165 RepID=UPI001985D810)

HSP 1 Score: 103 bits (256), Expect = 5.140e-26
Identity = 45/77 (58.44%), Postives = 59/77 (76.62%), Query Frame = 0
Query:   27 AMPYHGKMGDAERSDAQARFMSGEVDVITGSVAFGMGIDKSDVRFVVHWDLPKSVEGLYQELGRAGRDGSPAASVVY 103
            A+PYH  M D ER+  Q +F+  ++DVI  +VAFGMGI+K DVRFV+H+DLPK++EG YQE GRAGRDG PA   ++
Sbjct:   35 ALPYHAGMDDEERAINQTKFIRDDIDVIVATVAFGMGINKPDVRFVIHYDLPKNIEGYYQETGRAGRDGEPAKCTLF 111          
BLAST of mRNA_M-pyrifera_M_contig10081.173.1 vs. uniprot
Match: A0A2T1CRB2_9CYAN (DNA helicase n=1 Tax=filamentous cyanobacterium CCP2 TaxID=2107700 RepID=A0A2T1CRB2_9CYAN)

HSP 1 Score: 109 bits (272), Expect = 2.810e-25
Identity = 47/79 (59.49%), Postives = 64/79 (81.01%), Query Frame = 0
Query:   27 AMPYHGKMGDAERSDAQARFMSGEVDVITGSVAFGMGIDKSDVRFVVHWDLPKSVEGLYQELGRAGRDGSPAASVVYHS 105
            A+PYH  MGDA+R++ Q RF+  +V V+  ++AFGMGI+K DVRFVVH+DLP+++EG YQE GRAGRDG PA  ++Y+S
Sbjct:  268 ALPYHAGMGDAQRTENQTRFIRDDVQVMVATIAFGMGINKPDVRFVVHYDLPRNLEGYYQESGRAGRDGEPAQCILYYS 346          
BLAST of mRNA_M-pyrifera_M_contig10081.173.1 vs. uniprot
Match: A0A1Y1I869_KLENI (ATP-dependent DNA helicase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I869_KLENI)

HSP 1 Score: 109 bits (272), Expect = 2.820e-25
Identity = 48/90 (53.33%), Postives = 67/90 (74.44%), Query Frame = 0
Query:   29 PYHGKMGDAERSDAQARFMSGEVDVITGSVAFGMGIDKSDVRFVVHWDLPKSVEGLYQELGRAGRDGSPAASVVYHSQESASLLAFLAKK 118
            PYH  + DAERS     +++G + V+  ++AFGMGID++DVR VVH+++PKS+EG YQE GRAGRDG PA SV+Y+  E  SL+ F+ +K
Sbjct:  302 PYHAGLPDAERSRTLKDWVTGRIPVVAATIAFGMGIDRADVRLVVHFNMPKSIEGFYQESGRAGRDGQPAKSVLYYGSEDESLMQFILRK 391          
BLAST of mRNA_M-pyrifera_M_contig10081.173.1 vs. uniprot
Match: A0A317T5X7_9CHLB (DNA helicase n=1 Tax=Prosthecochloris marina TaxID=2017681 RepID=A0A317T5X7_9CHLB)

HSP 1 Score: 108 bits (271), Expect = 3.530e-25
Identity = 51/93 (54.84%), Postives = 63/93 (67.74%), Query Frame = 0
Query:   22 AKEFLAMPYHGKMGDAERSDAQARFMSGEVDVITGSVAFGMGIDKSDVRFVVHWDLPKSVEGLYQELGRAGRDGSPAASVVYHSQESASLLAF 114
            AK F  +PYH  +GD ER   Q  F+  EVDVI  ++AFGMGIDKS++RFV+H DLPKS+E  YQE GRAGRDG PA  ++  SQ     + F
Sbjct:  269 AKGFRVLPYHAGLGDEERKKNQEAFIRDEVDVIVATIAFGMGIDKSNIRFVIHADLPKSIENYYQETGRAGRDGEPAQCIMLFSQSDIPKVRF 361          
BLAST of mRNA_M-pyrifera_M_contig10081.173.1 vs. uniprot
Match: UPI00168624A5 (DNA helicase RecQ n=1 Tax=Oscillatoria sp. FACHB-1407 TaxID=2692847 RepID=UPI00168624A5)

HSP 1 Score: 108 bits (270), Expect = 3.790e-25
Identity = 51/99 (51.52%), Postives = 70/99 (70.71%), Query Frame = 0
Query:   27 AMPYHGKMGDAERSDAQARFMSGEVDVITGSVAFGMGIDKSDVRFVVHWDLPKSVEGLYQELGRAGRDGSPAASVVYHSQESASLLAFL-AKKPQPIAG 124
            A+PYH  + DAER+  Q RF+ GEV V+  ++AFGMGIDK D+RFV+H+DLP+++EG YQE GRAGRDG  +A  ++ S      + +L A+K  PI G
Sbjct:  268 ALPYHAGLSDAERTLNQTRFIQGEVRVMVATIAFGMGIDKPDIRFVIHFDLPRNMEGYYQECGRAGRDGQSSACTLFFSYGDIKTIEYLIAQKVHPITG 366          
BLAST of mRNA_M-pyrifera_M_contig10081.173.1 vs. uniprot
Match: A0A176VZW5_MARPO (ATP-dependent DNA helicase n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VZW5_MARPO)

HSP 1 Score: 108 bits (270), Expect = 5.260e-25
Identity = 50/92 (54.35%), Postives = 65/92 (70.65%), Query Frame = 0
Query:   30 YHGKMGDAERSDAQARFMSGEVDVITGSVAFGMGIDKSDVRFVVHWDLPKSVEGLYQELGRAGRDGSPAASVVYHSQESASLLAFLAKKPQP 121
            YH  +    RS+A   + SG+V V+  +VAFGMGID+ DVR V H+++PKS+EG YQE GRAGRDG PA SV+Y+  E   L+ FLA+KP P
Sbjct:  327 YHAGLAAKARSEALEEWTSGKVPVVIATVAFGMGIDRKDVRMVCHYNVPKSLEGFYQESGRAGRDGKPARSVIYYGLEDKGLMEFLARKPDP 418          
BLAST of mRNA_M-pyrifera_M_contig10081.173.1 vs. uniprot
Match: A0A7S2PHD3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PHD3_9STRA)

HSP 1 Score: 105 bits (263), Expect = 5.510e-25
Identity = 54/118 (45.76%), Postives = 79/118 (66.95%), Query Frame = 0
Query:    1 KTATAESLADALNRAMRVEPAAKEFLAMPYHGKMGDAERSDAQARFMSGEVDVITGSVAFGMGIDKSDVRFVVHWDLPKSVEGLYQELGRAGRDGSPAASVVYHSQESASLLAFLAKK 118
            K A A ++AD + RA  ++ AA       YH  + D+ RS+ Q  +  G+V V+  +VAFGMGID + VR+V+HW L KSVEG YQE GRAGRDG  + S++Y+S++ AS ++F+ +K
Sbjct:   66 KRADAGNIADQITRATGIKAAA-------YHAGLKDSIRSETQQLWTKGDVQVVVATVAFGMGIDLAHVRYVIHWCLAKSVEGFYQESGRAGRDGLESISILYYSKDDASKISFIIRK 176          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10081.173.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXK3_ECTSI4.900e-5475.59ATP-dependent DNA helicase n=1 Tax=Ectocarpus sili... [more]
A0A6H5KCP0_9PHAE5.510e-5375.97ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
B5YN30_THAPS1.870e-2654.84DNA helicase (Fragment) n=1 Tax=Thalassiosira pseu... [more]
UPI001985D8105.140e-2658.44hypothetical protein n=1 Tax=Okeania sp. KiyG1 Tax... [more]
A0A2T1CRB2_9CYAN2.810e-2559.49DNA helicase n=1 Tax=filamentous cyanobacterium CC... [more]
A0A1Y1I869_KLENI2.820e-2553.33ATP-dependent DNA helicase n=1 Tax=Klebsormidium n... [more]
A0A317T5X7_9CHLB3.530e-2554.84DNA helicase n=1 Tax=Prosthecochloris marina TaxID... [more]
UPI00168624A53.790e-2551.52DNA helicase RecQ n=1 Tax=Oscillatoria sp. FACHB-1... [more]
A0A176VZW5_MARPO5.260e-2554.35ATP-dependent DNA helicase n=2 Tax=Marchantia poly... [more]
A0A7S2PHD3_9STRA5.510e-2545.76Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 6..95
e-value: 7.6E-20
score: 81.9
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 23..94
e-value: 1.4E-13
score: 51.1
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 1..124
score: 14.821
NoneNo IPR availableGENE3D3.40.50.300coord: 1..122
e-value: 5.3E-33
score: 116.3
NoneNo IPR availablePANTHERPTHR13710DNA HELICASE RECQ FAMILY MEMBERcoord: 5..109
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig10081contigM-pyrifera_M_contig10081:500..4928 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig10081.173.1mRNA_M-pyrifera_M_contig10081.173.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig10081 500..4928 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig10081.173.1 ID=prot_M-pyrifera_M_contig10081.173.1|Name=mRNA_M-pyrifera_M_contig10081.173.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=124bp
KTATAESLADALNRAMRVEPAAKEFLAMPYHGKMGDAERSDAQARFMSGE
VDVITGSVAFGMGIDKSDVRFVVHWDLPKSVEGLYQELGRAGRDGSPAAS
VVYHSQESASLLAFLAKKPQPIAG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase