mRNA_M-pyrifera_M_contig73060.17345.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig73060.17345.1
Unique NamemRNA_M-pyrifera_M_contig73060.17345.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig73060.17345.1 vs. uniprot
Match: A0A7Y2D8J4_9ACTN (Ppx/GppA family phosphatase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2D8J4_9ACTN)

HSP 1 Score: 273 bits (698), Expect = 5.430e-85
Identity = 151/291 (51.89%), Postives = 192/291 (65.98%), Query Frame = 1
Query:    1 AARGEDLRSVNGVRFTSDELEAVIDSIASTDPDKRKDIPGIDPRRVDIITGGAVLLSEIFHAFGLTEMTVSSYALREGVLLDRFGGSRTAGLERLSDLRQANVDRMAAQLDPDPEHATTCAHLAGQLFDRTKHIHGLDDADRELLTCGAQLHNVGLFISHSSHHKHGYYVIRNTDRLTGFTQHEIEIIALIARYHRRGRPKERHREFAALVDTDQRRVRILAGLVRIAIGLDRSHAARISSVRVLVDDSATPPQVTIEPLAHDESDDLELELYAAADRSKLLADALGVDIV 873
            A RGE    +NG  FT  EL  + D++ +    KR  +PGIDPRR D+I GG +LL+EI  AF L  MTVS+YALREG L DRF      GL  L DLR++NV R+  QLDPDP HA     LA QLF  TK +H L DA++ LL   A LHNVGLFI+H++HHKH YYVIR++++LTGF++ E+E++A +ARYHR+  PK+RH  FAAL  +DQ  VR+LAGL+RIAIGLDR H   + SV V +       ++TI P         ELE Y+AA+R+ LLA AL   IV
Sbjct:  241 AQRGETDPQINGSTFTRQELMHLADAVVACPDHKRHKLPGIDPRRHDLIVGGVLLLAEILQAFDLPSMTVSAYALREGTLFDRFAAG---GLSSLRDLRRSNVARVTEQLDPDPRHARHITRLAEQLFVATKPLHNLGDAEQSLLEAAAMLHNVGLFINHAAHHKHSYYVIRHSEQLTGFSERELEVVANVARYHRKSHPKQRHEPFAALSPSDQATVRVLAGLLRIAIGLDRQHRQAVESVAVRIG----AKKLTITPQGS--GGQFELEAYSAANRAALLAKALDRRIV 522          
BLAST of mRNA_M-pyrifera_M_contig73060.17345.1 vs. uniprot
Match: A0A7Y2IIJ8_9ACTN (Ppx/GppA family phosphatase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2IIJ8_9ACTN)

HSP 1 Score: 270 bits (689), Expect = 1.270e-83
Identity = 148/286 (51.75%), Postives = 190/286 (66.43%), Query Frame = 1
Query:   16 DLRSVNGVRFTSDELEAVIDSIASTDPDKRKDIPGIDPRRVDIITGGAVLLSEIFHAFGLTEMTVSSYALREGVLLDRFGGSRTAGLERLSDLRQANVDRMAAQLDPDPEHATTCAHLAGQLFDRTKHIHGLDDADRELLTCGAQLHNVGLFISHSSHHKHGYYVIRNTDRLTGFTQHEIEIIALIARYHRRGRPKERHREFAALVDTDQRRVRILAGLVRIAIGLDRSHAARISSVRVLVDDSATPPQVTIEPLAHDESDDLELELYAAADRSKLLADALGVDIV 873
            D  S+NG   T+ +L+ +++ I  T P KR  I G+D +R DII GGA+L  ++    GL   T S+ ALREGVL+DR  G   A  + L DLR+ NV+R+A QLDPD  HA  C  LA QLFDRT+ IHGL  ADRELL     LHNVGLFISHS HHKH YYVIRN+++LTGF+  EIE+IA IARYHR+  P   H+ F  L D D+ RVR LAGL+RIAIGLDR H   + ++RVL+ D+     + IEPL   +  DL +E++AA +R  LLA+AL   ++
Sbjct:  241 DPASLNGATVTAAQLDDLVELIIKTPPAKRGRIRGLDRKRSDIILGGAILAQQVVELSGLDGFTYSALALREGVLVDRLPG---AAADHLHDLRRGNVERLAEQLDPDVHHAKHCTALALQLFDRTQSIHGLGSADRELLEMAGLLHNVGLFISHSGHHKHSYYVIRNSEQLTGFSDREIELIAQIARYHRKSHPSSGHQPFVELSDKDKGRVRTLAGLLRIAIGLDRRHVGAVGTIRVLLGDA-----IEIEPLPSSQEVDLSVEVHAATERVSLLAEALQCSVL 518          
BLAST of mRNA_M-pyrifera_M_contig73060.17345.1 vs. uniprot
Match: A0A7Y2GSJ3_9ACTN (Ppx/GppA family phosphatase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2GSJ3_9ACTN)

HSP 1 Score: 265 bits (677), Expect = 5.910e-82
Identity = 144/287 (50.17%), Postives = 188/287 (65.51%), Query Frame = 1
Query:    1 AARGEDLRSVNGVRFTSDELEAVIDSIASTDPDKRKDIPGIDPRRVDIITGGAVLLSEIFHAFGLTEMTVSSYALREGVLLDRFGGSRTAGLERLSDLRQANVDRMAAQLDPDPEHATTCAHLAGQLFDRTKHIHGLDDADRELLTCGAQLHNVGLFISHSSHHKHGYYVIRNTDRLTGFTQHEIEIIALIARYHRRGRPKERHREFAALVDTDQRRVRILAGLVRIAIGLDRSHAARISSVRVLVDDSATPPQVTIEPLAHDESDDLELELYAAADRSKLLADALG 861
            A+ G    ++NG   +  +L  ++  I +T P KR  +PG+D RR DII GGA+L  +I    GL   T SS+ALREGVLLDR  G   A  + L DLR+ NV R++  LDPD +HA  C  LA QLFDRT  +HG    +RELL     LHNVGLF+SHS HHKH YYVIRN+++LTGF  +EIE+IA IARYHR+  P + H  + AL   DQ  V++LAG++RIAIGLDR H A ++SVRVL +D      +TIEP+  D  +DL +E++AA +R  LL+ AL 
Sbjct:  223 ASAGSVPTNLNGTTVSKSQLAELVALIIATKPGKRAKLPGLDERRADIIVGGAILAEQIVELSGLDGFTFSSFALREGVLLDRMPG---AAADHLDDLRRTNVVRLSRTLDPDADHAQHCTKLALQLFDRTDDLHGCGPYERELLEMAGLLHNVGLFLSHSGHHKHSYYVIRNSEQLTGFNDNEIELIAQIARYHRKSHPSKNHEAYMALSKQDQHSVKVLAGILRIAIGLDRRHRASVASVRVLANDG-----LTIEPVPLDPDEDLSIEVHAANERVSLLSAALA 501          
BLAST of mRNA_M-pyrifera_M_contig73060.17345.1 vs. uniprot
Match: A0A5Q2RR23_9ACTN (HD domain-containing protein n=2 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RR23_9ACTN)

HSP 1 Score: 258 bits (659), Expect = 3.810e-79
Identity = 149/296 (50.34%), Postives = 195/296 (65.88%), Query Frame = 1
Query:    1 AARGEDL-RSVNGVRFTSDELEAVIDSIASTDPDK-RKDIPGIDPRRVDIITGGAVLLSEIFHAFGLTEMTVSSYALREGVLLD----RFGGSRTAGLERLSDLRQANVDRMAAQLDPDPEHATTCAHLAGQLFDRTKHIHGLDDADRELLTCGAQLHNVGLFISHSSHHKHGYYVIRNTDRLTGFTQHEIEIIALIARYHRRGRPKERHREFAALVDTDQRRVRILAGLVRIAIGLDRSHAARISSVRVLVDDSATPPQVTIEPLAHDESDDLELELYAAADRSKLLADALGVDI 870
            A RG+D  R++  +  T+ E+ AV+D I S    K R  +PG++ +R DII  GA++L ++  A  + E+ +S++ALREGVLLD    R GG R      L+DLR+A+   +A  LDPD  H+     LA QLFD T  +HGLDDA RELL     LHNVGLFISHS+HHKH YYVIR+++ L GFT HEIE+IA IARYHR+  PK++H E+A L   D+R V +LAGL+R+AIGLDRSHA  I+ VR  VD+S+    V     A  +  D  LELY+A  R  LLADALG+D+
Sbjct:  234 ARRGDDPGRNLGNLSVTASEIAAVVDEIVSAPTAKERAKLPGMEAKRADIIVAGAIILEQVLAALDVDELRISTFALREGVLLDQATHRGGGPR----HHLTDLRRASTVHLADALDPDRAHSDHLTALALQLFDDTADVHGLDDAYRELLEAAGLLHNVGLFISHSAHHKHSYYVIRHSEHLLGFTDHEIELIAQIARYHRKSAPKDKHPEWAGLRSADRRAVAVLAGLLRVAIGLDRSHAGAIAEVRATVDESSGRLDVVA---AAADGADPSLELYSADQRKDLLADALGLDV 522          
BLAST of mRNA_M-pyrifera_M_contig73060.17345.1 vs. uniprot
Match: A0A359EZ09_9ACTN (Exopolyphosphatase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A359EZ09_9ACTN)

HSP 1 Score: 255 bits (652), Expect = 5.800e-78
Identity = 143/293 (48.81%), Postives = 192/293 (65.53%), Query Frame = 1
Query:    1 AARGEDLRSVNGVRFTSDELEAVIDS-IASTDPDKRKDIPGIDPRRVDIITGGAVLLSEIFHAFGLTEMTVSSYALREGVLLDRFGGSRTAGLERLSDLRQANVDRMAAQLDPDPEHATTCAHLAGQLFDRTKHIHGLDDADRELLTCGAQLHNVGLFISHSSHHKHGYYVIRNTDRLTGFTQHEIEIIALIARYHRRGRPKERHREFAALVDTDQRRVRILAGLVRIAIGLDRSHAARISSVRVLVDDSATPPQVTIEPLAHDESDDLELELYAAADRSKLLADALGVDIVF 876
            AAR  +++++NG  FT+ EL++ ID  IA+ DP++R  IPG+D  R DI+ GGA++L  +  AF +  +  S YALREG L D +     +   +LSD+R ++V  +    D DPEH+   A LA  LFD    +HGL   DR LL  GA L NVGL I+HS HH+H YYVIRN+++L+GF  HEIEIIA +ARYHRR RP  +HREFAAL + DQ RV+  A ++RIAIGLDRSHA  + S+RV +  SAT   + +EP   D  D + LELY+A +RS LLA     ++VF
Sbjct:  242 AARRSEVQNLNGATFTAAELKSAIDLLIAAPDPEERARIPGVDAGRADILLGGALILEAVLDAFAIETVQFSEYALREGALFDLYSRLEGSKPNQLSDIRSSSVMHLMELCDDDPEHSHQVARLALALFDGLTDLHGLGPVDRGLLEAGALLANVGLSIAHSRHHQHSYYVIRNSEQLSGFNDHEIEIIAQVARYHRRSRPSLKHREFAALGEADQHRVQWCAAVLRIAIGLDRSHAGAVGSLRVKI--SATSITIVVEPSQAD-PDSISLELYSAEERSGLLASLAEREVVF 531          
BLAST of mRNA_M-pyrifera_M_contig73060.17345.1 vs. uniprot
Match: UPI001F2554A0 (Ppx/GppA family phosphatase n=1 Tax=Rhabdothermincola sediminis TaxID=2751370 RepID=UPI001F2554A0)

HSP 1 Score: 249 bits (637), Expect = 2.570e-76
Identity = 140/289 (48.44%), Postives = 184/289 (63.67%), Query Frame = 1
Query:    1 AARGEDL-RSVNGVRFTSDELEAVIDSIASTDP-DKRKDIPGIDPRRVDIITGGAVLLSEIFHAFGLTEMTVSSYALREGVLLDRFGGSRTAGLERLSDLRQANVDRMAAQLDPDPEHATTCAHLAGQLFDRTKHIHGLDDADRELLTCGAQLHNVGLFISHSSHHKHGYYVIRNTDRLTGFTQHEIEIIALIARYHRRGRPKERHREFAALVDTDQRRVRILAGLVRIAIGLDRSHAARISSVRVLVDDSATPPQVTIEPLAHDESDDLELELYAAADRSKLLADALG 861
            AARGE   R+ NG      E+ A ++++ + D   +R+ + G+DP R DI+  GA++L ++    G+  +TVS YALREGVLLD     R   L  L DLR+ +V  +   +D DPEH+   A LA  LFD+T+  HGL DA RELL  G  L NVGLF+SHS HHKH YYVIRN+D L+GFT HEIE+IALIARYHR+  PK +HREFAAL  +DQ  VR+ A L R+ I LDR+ +  + +V V  D      ++ IE    D S DL LEL+ A +R+ LLA+ LG
Sbjct:  186 AARGEPAPRTFNGFELGRSEVVAAVEALIAADTVGQRRRLAGVDPARADILLAGAIILEQVTGELGIERLTVSDYALREGVLLDALARERGGALHHLQDLRRRSVMHLLELMDDDPEHSRRAARLALSLFDQTRRWHGLGDAARELLEAGTLLANVGLFVSHSGHHKHSYYVIRNSDHLSGFTDHEIELIALIARYHRKSAPKAKHREFAALRPSDQGLVRVAAALSRVGIALDRTRSGLVEAVEVREDGD----EIVIEARPTD-SADLTLELFTAGERAPLLAEVLG 469          
BLAST of mRNA_M-pyrifera_M_contig73060.17345.1 vs. uniprot
Match: A0A538DKF4_9ACTN (Ppx/GppA family phosphatase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538DKF4_9ACTN)

HSP 1 Score: 250 bits (638), Expect = 5.250e-76
Identity = 139/288 (48.26%), Postives = 178/288 (61.81%), Query Frame = 1
Query:    1 AARGED-LRSVNGVRFTSDELEAVIDSIASTDPDKRKDIPGIDPRRVDIITGGAVLLSEIFHAFGLTEMTVSSYALREGVLLDRFGGSRTAGLERLSDLRQANVDRMAAQLDPDPEHATTCAHLAGQLFDRTKHIHGLDDADRELLTCGAQLHNVGLFISHSSHHKHGYYVIRNTDRLTGFTQHEIEIIALIARYHRRGRPKERHREFAALVDTDQRRVRILAGLVRIAIGLDRSHAARISSVRVLVDDSATPPQVTIEPLAHDESDDLELELYAAADRSKLLADALG 861
            A RG D +RSVN V FT  +L  ++D++      +   +PG+DPRR DII  GA+LL +IF    + EM  S YALREGVLLD            LSD+R+  V R+    + D  H      LA +LFD T+ +H LD  DR+ L     +HNVGLFISHS+HHKH YYVIRN D L GFT HE+E++AL+ARYHR+G P  +H EF+AL  TDQ RVR+LAGL+R+ I LDRSHA  +  +R  +    T  QV ++P+      D  LE+Y A  R  LLADALG
Sbjct:  231 ARRGRDSIRSVNNVSFTRAQLAQIVDTLVVERGVELDRLPGLDPRRSDIIVAGALLLEQIFEQLNIEEMIASEYALREGVLLDLAHSDDPRAFHHLSDIRREGVQRVVDLFEHDRAHVEHSTDLALRLFDETQTLHDLDTDDRDHLEAAGLMHNVGLFISHSAHHKHSYYVIRNNDHLVGFTDHEVELMALVARYHRKGAPSAKHEEFSALDVTDQYRVRVLAGLLRVGIALDRSHARHVHDLRCEI----TKNQVIVQPVVRT-GVDASLEVYTANQRVDLLADALG 513          
BLAST of mRNA_M-pyrifera_M_contig73060.17345.1 vs. uniprot
Match: A0A7V8X133_9ACTN (Ppx/GppA family phosphatase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V8X133_9ACTN)

HSP 1 Score: 249 bits (636), Expect = 8.770e-76
Identity = 147/295 (49.83%), Postives = 191/295 (64.75%), Query Frame = 1
Query:    1 AARGED-LRSVNGVRFTSDELEAVIDSIASTDPD--KRKDIPGIDPRRVDIITGGAVLLSEIFHAFGLTEMTVSSYALREGVLLDRFGGSRTAGLERLSDLRQANVDRMAAQL--DPDPEHATTCAHLAGQLFDRTKHIHGLDDADRELLTCGAQLHNVGLFISHSSHHKHGYYVIRNTDRLTGFTQHEIEIIALIARYHRRGRPKERHREFAALVDTDQRRVRILAGLVRIAIGLDRSHAARISSVRVLVDDSATPPQVTIEPLAHDESDDLELELYAAADRSKLLADALGVDI 870
            AARG+D +R+V+   FT+ EL  +ID +A T P   KR D+PG+DPRR DII GG V+L ++F   G+ EM VS +ALREGVLLD     +++ L  L DLR  +V  +A+    D + EH    A LA QLF+ T+  HGLD    E L   A L NVGL +SH  HH H YY+IR+TD LTGFT HEIE+IAL+ARYHR+  PK  H E+A L + D+R VR+LAGL+R+A+GLDR+    + +VRV   D     +V +EP+      D ELELY+AA R  LL +ALGV I
Sbjct:  227 AARGQDPMRTVSNASFTASELAGMIDELA-TRPTVAKRADVPGLDPRRADIILGGVVVLEQVFRVLGIDEMVVSDFALREGVLLDVLRRRQSSSLGHLRDLRYESVIHLASLTPGDDEKEHGAQVAELALQLFEGTRDQHGLDSRCEEWLEAAAVLCNVGLVVSHDRHHLHSYYLIRHTDLLTGFTDHEIELIALVARYHRKSAPKASHAEYARLSEDDRRLVRVLAGLLRMAVGLDRTRNRVVDAVRV-EPDGKQGIRVVVEPVV---GADTELELYSAAARKDLLEEALGVSI 516          
BLAST of mRNA_M-pyrifera_M_contig73060.17345.1 vs. uniprot
Match: UPI001E4B0FB9 (Ppx/GppA family phosphatase n=2 Tax=Rhabdothermincola sp. EGI L10124 TaxID=2903142 RepID=UPI001E4B0FB9)

HSP 1 Score: 242 bits (618), Expect = 4.720e-73
Identity = 142/296 (47.97%), Postives = 185/296 (62.50%), Query Frame = 1
Query:    4 ARGED-LRSVNGVRFTSDELEAVIDS-IASTDPDKRKDIPGIDPRRVDIITGGAVLLSEIFHAFGLTEMTVSSYALREGVLLDRFGGSRTAGLERLSDLRQANVDRMAAQLDPDPEHATTCAHLAGQLFDRTKHIHGLDDADRELLTCGAQLHNVGLFISHSSHHKHGYYVIRNTDRLTGFTQHEIEIIALIARYHRRGRPKERHREFAALVDTDQRRVRILAGLVRIAIGLDRSHAARISSVRVLVDDSATPPQVTI--EPLAHDESDDLELELYAAADRSKLLADALG--VDIV 873
            ARG++  R+ N    T+ E+ AV+D  IA+   + R+ +PG+D  R DII  GA++L  +    G+ E+  S YALREG LLD     R A L  L DLR+ +V  +AA +D +PEH+   A LA +LFD T   HGLDD  RELL  GA L NVG  ISHS HHKH YY+IR++DRL GFT HEIE+IALIARYHR+  PK +H EFA L   DQ  V +LAG++R+AI LDRSHA  +  +RV   + + P Q+ +   P A     DL LEL+   +R  LL   LG  +D+V
Sbjct:  235 ARGDEPARTYNNASVTAAEIAAVVDELIAAETVEGRRRLPGMDAGRADIILAGALILDGVVRGLGIDEVVFSDYALREGALLDALARRRGANLHHLRDLRRRSVVALAASMDDEPEHSERTAGLALELFDATARWHGLDDEWRELLEAGALLANVGQAISHSEHHKHSYYLIRHSDRLAGFTDHEIELIALIARYHRKSAPKPKHTEFARLRPEDQEAVTVLAGILRVAIALDRSHAGPVEHLRVTSANGSGPLQILVTGRPGA-----DLSLELHTGTERKDLLERVLGHRIDLV 525          
BLAST of mRNA_M-pyrifera_M_contig73060.17345.1 vs. uniprot
Match: A0A6I3D733_9ACTN (HD domain-containing protein n=7 Tax=root TaxID=1 RepID=A0A6I3D733_9ACTN)

HSP 1 Score: 240 bits (612), Expect = 3.340e-72
Identity = 138/287 (48.08%), Postives = 180/287 (62.72%), Query Frame = 1
Query:   19 LRSVNGVRFTSDELEAVIDS-IASTDPDKRKDIPGIDPRRVDIITGGAVLLSEIFHAFGLTEMTVSSYALREGVLLDRFGGSRTAGLERLSDLRQANVDRMAAQLDPDPEHATTCAHLAGQLFDRTKHIHGLDDADRELLTCGAQLHNVGLFISHSSHHKHGYYVIRNTDRLTGFTQHEIEIIALIARYHRRGRPKERHREFAALVDTDQRRVRILAGLVRIAIGLDRSHAARISSVRVLVDDSATPPQVTIEPLAHDESDDLELELYAAADRSKLLADALGVDIVF 876
            LR++N    TS+E++  + S +A++  ++R+ +PG+DP R DII  GA++L +     G+ E+ +S  ALREGVLLD       A L  L DLR+ +V  +A  +D D +H+   A  A  LFD T  +HGL D  RELL  GA L NVGL ISHS HHKH YYVIR++DRL+GFT HEIE+IA IARYHR+  PK +H EFA L   DQ RVRILAGL+R+AI LDRSH  R+   R++V       +V I     D   D +LE+  A DR  LL D LG  + F
Sbjct:  238 LRTMNNFVMTSEEIKNAVKSLVAASSVEERRALPGMDPSRADIILAGALILEQAVEELGIDEIVISDNALREGVLLDALSRRGGATLHHLRDLRRRSVLHLAESMDDDVDHSMRAAGFALDLFDATSLLHGLGDDSRELLEAGALLANVGLSISHSEHHKHSYYVIRHSDRLSGFTDHEIELIAQIARYHRKSAPKPKHPEFARLWPEDQERVRILAGLLRVAIALDRSHKGRVE--RIVVSAKQDAEEVVIAVKQRD-GFDADLEVQTAEDRKGLLEDVLGRRVRF 521          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig73060.17345.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Y2D8J4_9ACTN5.430e-8551.89Ppx/GppA family phosphatase n=1 Tax=Acidimicrobial... [more]
A0A7Y2IIJ8_9ACTN1.270e-8351.75Ppx/GppA family phosphatase n=1 Tax=Acidimicrobial... [more]
A0A7Y2GSJ3_9ACTN5.910e-8250.17Ppx/GppA family phosphatase n=1 Tax=Acidimicrobial... [more]
A0A5Q2RR23_9ACTN3.810e-7950.34HD domain-containing protein n=2 Tax=Actinomarinic... [more]
A0A359EZ09_9ACTN5.800e-7848.81Exopolyphosphatase n=1 Tax=Acidimicrobiaceae bacte... [more]
UPI001F2554A02.570e-7648.44Ppx/GppA family phosphatase n=1 Tax=Rhabdotherminc... [more]
A0A538DKF4_9ACTN5.250e-7648.26Ppx/GppA family phosphatase n=1 Tax=Actinomycetia ... [more]
A0A7V8X133_9ACTN8.770e-7649.83Ppx/GppA family phosphatase n=1 Tax=Acidimicrobiia... [more]
UPI001E4B0FB94.720e-7347.97Ppx/GppA family phosphatase n=2 Tax=Rhabdotherminc... [more]
A0A6I3D733_9ACTN3.340e-7248.08HD domain-containing protein n=7 Tax=root TaxID=1 ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig73060contigM-pyrifera_M_contig73060:234..1109 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score242.3
Seed ortholog evalue2.9e-61
Seed eggNOG ortholog1229780.BN381_80138
Preferred nameppx
KEGG rclassRC00002
KEGG koko:K01524
KEGG ReactionR03409
KEGG Pathwayko00230,map00230
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Ppx GppA phosphatase
EggNOG OGs2GMME@201174,COG0248@1,COG0248@2
EC3.6.1.11,3.6.1.40
COG Functional cat.FP
Best tax levelActinobacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons1
Model size876
Cds size876
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816627.7764657-CDS-M-pyrifera_M_contig73060:233..11091622816627.7764657-CDS-M-pyrifera_M_contig73060:233..1109Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig73060 234..1109 -
1692278085.8151748-CDS-M-pyrifera_M_contig73060:233..11091692278085.8151748-CDS-M-pyrifera_M_contig73060:233..1109Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig73060 234..1109 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig73060.17345.1prot_M-pyrifera_M_contig73060.17345.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig73060 234..1109 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig73060.17345.1

>prot_M-pyrifera_M_contig73060.17345.1 ID=prot_M-pyrifera_M_contig73060.17345.1|Name=mRNA_M-pyrifera_M_contig73060.17345.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=292bp
AARGEDLRSVNGVRFTSDELEAVIDSIASTDPDKRKDIPGIDPRRVDIIT
GGAVLLSEIFHAFGLTEMTVSSYALREGVLLDRFGGSRTAGLERLSDLRQ
ANVDRMAAQLDPDPEHATTCAHLAGQLFDRTKHIHGLDDADRELLTCGAQ
LHNVGLFISHSSHHKHGYYVIRNTDRLTGFTQHEIEIIALIARYHRRGRP
KERHREFAALVDTDQRRVRILAGLVRIAIGLDRSHAARISSVRVLVDDSA
TPPQVTIEPLAHDESDDLELELYAAADRSKLLADALGVDIVF
back to top

mRNA from alignment at M-pyrifera_M_contig73060:234..1109-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig73060.17345.1 ID=mRNA_M-pyrifera_M_contig73060.17345.1|Name=mRNA_M-pyrifera_M_contig73060.17345.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=876bp|location=Sequence derived from alignment at M-pyrifera_M_contig73060:234..1109- (Macrocystis pyrifera P11B4 male)
GCAGCCCGCGGCGAAGACCTTCGCTCGGTCAACGGGGTCCGCTTCACGAG CGACGAGCTCGAAGCGGTGATCGACTCGATCGCCTCGACCGACCCTGACA AGCGAAAAGACATCCCCGGGATCGATCCACGAAGGGTCGACATCATCACC GGCGGCGCCGTCCTGCTGTCTGAGATCTTCCATGCCTTCGGACTCACCGA GATGACGGTCTCGAGCTACGCCCTCCGCGAAGGCGTGCTCCTGGACCGGT TCGGCGGGTCTCGAACCGCCGGCCTGGAGCGTCTCAGCGATCTCCGGCAG GCCAACGTCGATCGCATGGCGGCCCAGCTCGACCCCGACCCCGAGCACGC CACGACCTGTGCCCATCTCGCCGGCCAGCTGTTCGACCGAACCAAGCACA TCCACGGCCTCGACGACGCCGACCGCGAGCTGCTGACCTGCGGCGCACAG CTCCACAACGTCGGGCTGTTCATCAGTCACTCGAGCCACCACAAGCACGG CTACTACGTGATCCGCAACACCGATCGGCTGACCGGGTTCACCCAACACG AGATCGAGATCATCGCGCTCATCGCCCGCTACCACCGGCGTGGACGCCCC AAGGAACGCCATCGTGAGTTTGCCGCCCTGGTCGACACCGACCAGCGCCG GGTGCGTATTCTGGCCGGTCTGGTCCGGATCGCCATCGGGCTCGATCGCA GCCATGCCGCACGGATCTCGTCGGTGCGAGTGCTGGTCGACGATTCGGCG ACGCCGCCACAGGTCACGATCGAACCGCTCGCCCATGACGAGTCCGACGA TCTCGAACTCGAGCTGTACGCCGCGGCCGACCGCTCGAAACTGCTGGCCG ACGCCCTCGGTGTCGACATCGTGTTC
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig73060:234..1109-

>mRNA_M-pyrifera_M_contig73060.17345.1 ID=mRNA_M-pyrifera_M_contig73060.17345.1|Name=mRNA_M-pyrifera_M_contig73060.17345.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1752bp|location=Sequence derived from alignment at M-pyrifera_M_contig73060:234..1109- (Macrocystis pyrifera P11B4 male)
GCAGCCCGCGGCGAAGACCTTCGCTCGGTCAACGGGGTCCGCTTCACGAG
CGACGAGCTCGAAGCGGTGATCGACTCGATCGCCTCGACCGACCCTGACA
AGCGAAAAGACATCCCCGGGATCGATCCACGAAGGGTCGACATCATCACC
GGCGGCGCCGTCCTGCTGTCTGAGATCTTCCATGCCTTCGGACTCACCGA
GATGACGGTCTCGAGCTACGCCCTCCGCGAAGGCGTGCTCCTGGACCGGT
TCGGCGGGTCTCGAACCGCCGGCCTGGAGCGTCTCAGCGATCTCCGGCAG
GCCAACGTCGATCGCATGGCGGCCCAGCTCGACCCCGACCCCGAGCACGC
CACGACCTGTGCCCATCTCGCCGGCCAGCTGTTCGACCGAACCAAGCACA
TCCACGGCCTCGACGACGCCGACCGCGAGCTGCTGACCTGCGGCGCACAG
CTCCACAACGTCGGGCTGTTCATCAGTCACTCGAGCCACCACAAGCACGG
CTACTACGTGATCCGCAACACCGATCGGCTGACCGGGTTCACCCAACACG
AGATCGAGATCATCGCGCTCATCGCCCGCTACCACCGGCGTGGACGCCCC
AAGGAACGCCATCGTGAGTTTGCCGCCCTGGTCGACACCGACCAGCGCCG
GGTGCGTATTCTGGCCGGTCTGGTCCGGATCGCCATCGGGCTCGATCGCA
GCCATGCCGCACGGATCTCGTCGGTGCGAGTGCTGGTCGACGATTCGGCG
ACGCCGCCACAGGTCACGATCGAACCGCTCGCCCATGACGAGTCCGACGA
TCTCGAACTCGAGCTGTACGCCGCGGCCGACCGCTCGAAACTGCTGGCCG
ACGCCCTCGGTGTCGACATCGTGTTCGCAGCCCGCGGCGAAGACCTTCGC
TCGGTCAACGGGGTCCGCTTCACGAGCGACGAGCTCGAAGCGGTGATCGA
CTCGATCGCCTCGACCGACCCTGACAAGCGAAAAGACATCCCCGGGATCG
ATCCACGAAGGGTCGACATCATCACCGGCGGCGCCGTCCTGCTGTCTGAG
ATCTTCCATGCCTTCGGACTCACCGAGATGACGGTCTCGAGCTACGCCCT
CCGCGAAGGCGTGCTCCTGGACCGGTTCGGCGGGTCTCGAACCGCCGGCC
TGGAGCGTCTCAGCGATCTCCGGCAGGCCAACGTCGATCGCATGGCGGCC
CAGCTCGACCCCGACCCCGAGCACGCCACGACCTGTGCCCATCTCGCCGG
CCAGCTGTTCGACCGAACCAAGCACATCCACGGCCTCGACGACGCCGACC
GCGAGCTGCTGACCTGCGGCGCACAGCTCCACAACGTCGGGCTGTTCATC
AGTCACTCGAGCCACCACAAGCACGGCTACTACGTGATCCGCAACACCGA
TCGGCTGACCGGGTTCACCCAACACGAGATCGAGATCATCGCGCTCATCG
CCCGCTACCACCGGCGTGGACGCCCCAAGGAACGCCATCGTGAGTTTGCC
GCCCTGGTCGACACCGACCAGCGCCGGGTGCGTATTCTGGCCGGTCTGGT
CCGGATCGCCATCGGGCTCGATCGCAGCCATGCCGCACGGATCTCGTCGG
TGCGAGTGCTGGTCGACGATTCGGCGACGCCGCCACAGGTCACGATCGAA
CCGCTCGCCCATGACGAGTCCGACGATCTCGAACTCGAGCTGTACGCCGC
GGCCGACCGCTCGAAACTGCTGGCCGACGCCCTCGGTGTCGACATCGTGT
TC
back to top